mRNA_H-elongata_contig12639.1966.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: D8LEQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ5_ECTSI) HSP 1 Score: 654 bits (1688), Expect = 1.310e-225 Identity = 401/694 (57.78%), Postives = 462/694 (66.57%), Query Frame = 1
Query: 55 MGKISKRQRKFLSKKVLPHRKKGPVRRAVGKDKQGADIRGAET-----QPPTATNTRKTLPDGIDTGAYLECLWLTQEACSVAPIDNTVPPF-----CLEETMSVSGPESVSGSGKRPSSSLSAETVQAMVGRAVGGASTDDLLLAVRALQISYGRL--PEGAPILTAIEAKLRAEPGSSAWDALRREGFGRLHAAFLTHLGPDR--ENGDSSEEWEEAVHAHRQNFVKMKAWPRLGSALLTFLTTALDSLGISEKT-----ITAPTSTTLSGGEAQNSSALVEGLVQMRNHLPLLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLELLHPYGGESHGESLEYDETPRERGQKAGGSAGIVGDKKRRHQGQAGKGEAKEGAEVVDLSAVVGLGKEDLRSGAVHAAVSRAAAGLIVRETVCYRWSAGLPELCAGAQARLEKLLE--DGRLPTDGGVGRYRARVKSVHAAVGRAALEAAARRCRGEKHPGEAAGIDTLRG 2073
MGK++KRQRKFLSKKVL HRKKG VRR K K GA T Q P A + RKTLPDG+DT A+LEC WL++EAC+ A D V PF LE + + GS SSSL+ E +AMVGRAV S DDLL V ALQ + P + T LRA PGS A AL E RLH AF HLGP+R E+G S EEWE+AV AHRQ K +AWPRLG ALL+FLT+ALDS+ T + ++ G S++LV+GL +MRNH+PLLFPFPRLARRYL++LL VL+T+D A++SLAFVRLYELSTSQPMPFLHDAFKG+YR YRAAAER+GG G AGV+ KG SLPLLRE AELFGVEKPSAYLHAYVYIH+L REA+EA EV K GG R+AGPALRRLRSWGFLQSLQLWT VV AHP K+SLGPLVPPLAKALEI+F LSPGLYGAPRTLALARSAQ+LAAAAGVFLPTS +LVGLLELLH E+ S A +DLSA+ GLGKEDLR V AAVSR AAGL+ RE VCYRWSAG+PELCA +ARL +LL+ DG DG GR+RARVK++ ++G++A E ARR RG KHPGEA +DT RG
Sbjct: 1 MGKVNKRQRKFLSKKVLTHRKKGGVRRD-NKSKGNGAAAGAATALEASQAPGAQH-RKTLPDGVDTAAFLECPWLSREACAAAGRDACVAPFEPEVALLEGAATSKRGKRGGGSKGSGSSSLTEEAARAMVGRAVDERSLDDLLRVVWALQEATTAAGDPSSPALPTTCHQALRAAPGSKAAGALVSEASSRLHLAFRAHLGPERDEEDGSSVEEWEDAVRAHRQKLEKAEAWPRLGGALLSFLTSALDSVETEWATSNSVAVEGRADSSKQGSSGATSASLVDGLDRMRNHVPLLFPFPRLARRYLAFLLDVLQTSDNTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGG------GRGAGVMAKGDGAGSSLPLLREWFAELFGVEKPSAYLHAYVYIHDLAREAVEAAAEVKKGGGKARDAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSSLGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHHLVGLLELLH--AREARPGSTASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA--LDLSAMAGLGKEDLRVVEVRAAVSREAAGLVAREAVCYRWSAGMPELCASTRARLGRLLDGGDGGGXADGAAGRWRARVKALQTSLGKSAAETMARRARGSKHPGEAGPVDTFRG 682
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A6H5KR85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR85_9PHAE) HSP 1 Score: 621 bits (1602), Expect = 4.600e-212 Identity = 379/638 (59.40%), Postives = 431/638 (67.55%), Query Frame = 1
Query: 55 MGKISKRQRKFLSKKVLPHRKKGPVRR---AVGKDKQGADIRGAETQPPTATNTRKTLPDGIDTGAYLECLWLTQEACSVAPIDNTVPPFCLEETM------SVSGPESVSGSGKRPSSSLSAETVQAMVGRAVGGASTDDLLLAVRALQISYGRLPEGAPILTAIEAKLRAEPGSSAWDALRREGFGRLHAAFLTHLGPDR--ENGDSSEEWEEAVHAHRQNFVKMKAWPRLGSALLTFLTTALDSLGISEKT-----ITAPTSTTLSGGEAQNSSALVEGLVQMRNHLPLLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLELLHPYGGESHGESLEYDETPRERGQKAGGSAGIVGDKKRRHQGQAGKGEAKEGAEVVDLSAVVGLGKEDLRSGAVHAAVSRAAAGLIVRETVCYRWSAGLPELCAGAQARLEKLLEDG 1920
MGK++KRQRKFLSKKVL HRKKG VRR + GK GA E RKTLPDG+DT A+LEC WL+ EAC+ A D V PF E + S SG + G G SSSL+ + +AM+GRAV S DDLL V ALQ + G P A + T LRA PGS A DAL E RLH AF HL PDR E+G S EEWE+ V AHRQ K +AWPRLG ALL+FLT+ALD + T + ++ G A S++L +GL +MRNH+PLLFPFPRLARRYLS+LL+VL+T+D A++SLAFVRLYELSTSQPMPFLHDAFKG+YR YRAAAER+GG G A V+ +G SLPLLRECLAELFGVEKPSAYLHAYVYIHEL REA+ A EV K GG REAGPALRRLRSWGFLQSLQLWT VV AHP K+SLGPLVPPLAKALEI+F LSPGLYGAPRTLALARSAQ+LAAAAGVFLPTS YLVGLLELLH G + P + G++AG V A +DLSA+ GLGKEDLR V AAVSR AAGLI RE VCYRWSAG+PELCA ARL +LL+ G
Sbjct: 1 MGKVNKRQRKFLSKKVLTHRKKGGVRRDNKSKGKGVGGAAATAPEASQAPGAQHRKTLPDGVDTAAFLECPWLSPEACANAGRDACVAPFEPEAALLEGASPSKSGKQGGGGEGS-VSSSLTEQAARAMIGRAVDERSLDDLLRVVWALQ-AIGD-PSSAAVPTTSHQPLRAAPGSKAADALISEASSRLHLAFRAHLEPDRDEEDGSSVEEWEDTVRAHRQKLEKAEAWPRLGGALLSFLTSALDCVETEWATSISVAVEGCADSSKQGSSAATSASLEDGLDRMRNHVPLLFPFPRLARRYLSFLLAVLQTSDSTAALSLAFVRLYELSTSQPMPFLHDAFKGSYRCYRAAAERIGG------GRGARVMARGEGAGSSLPLLRECLAELFGVEKPSAYLHAYVYIHELAREAVGAAAEVKKGGGMAREAGPALRRLRSWGFLQSLQLWTSVVTAHPAKSSLGPLVPPLAKALEITFQLSPGLYGAPRTLALARSAQDLAAAAGVFLPTSHYLVGLLELLHAREARP-GATAPSAGGPAD-GEEAGPGGLTVASGXXXXXXXXXXXXXXXAA--LDLSAMAGLGKEDLRVAEVRAAVSREAAGLIAREAVCYRWSAGMPELCASTGARLGRLLDGG 625
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A835ZBW6_9STRA (Noc2p family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW6_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.910e-21 Identity = 132/500 (26.40%), Postives = 177/500 (35.40%), Query Frame = 1
Query: 676 AHRQNFVKM---KAWPRLGSALLTFLTTALDSLGISEKTITAPTSTTLSGGEAQNSSALVEGLVQMRNHLPLLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAA-----------------HPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLELLHPYGGESHGESLEYDETPRERGQKAGGSAGIVGDKKRRHQGQAGKGEAKEGAEVVDLSAVVGLGKEDLRSGAVHAAVSRAAAGLIVRETVCYRWSAGLPELCAG-AQARLEKLLEDGRLPTDGGVGRYRARVKSVHAAVGRAALEAAARRCRGEKHPGEAAGIDTLRGAEESTAAQRLQLF 2112
A Q KM +AWPRL AL FL A +L LS A + L+ PFP LAR L + SQP+P H A + YR YR A ER+ G +G ++ LR +AEL+ E ++ LHA+V++H + A VE + GG EA A +RSW FLQ + LWT VVAA A + PG P LALAR+AQ+LAAAAGVFLP + +G LE+ Y S L+AV L +++LR A A+ AA L+ RE Y S P+ A+A A +++ A+ R A + R R HP ++ LR + + AA RL L
Sbjct: 252 AFLQRHAKMPRSEAWPRLAGALRAFLEAAPHAL--------------LSAAGAATAEVXXXXXXXXXXXXXLMIPFPELARAALRSAADXXXXXXXXXXXXXXXXXXXXXALSQPLPLFHTALRAAYRAYRLAVERLDGS--------SGXXXXXXXXXATMAALRTGVAELYRHEPAASQLHAFVFLHTMA-----ATVEAAEEGGKAGEA--ATVEVRSWPFLQCVLLWTRVVAAGCSSGGGXXXXXXXXXXXXXXAPMXXXXXXXXXXXXXXXXXXPGAPSLPHRLALARAAQDLAAAAGVFLPAAWMAMGALEVDSLYAVRSAAXXXXXXXXXX----------------------------XXXXXXXFALAAVARLSRDELRDAAAQRALLAEAAALLAREAALYAQSPAHPDYAGRCARALTAAAAXXXXXXXXXXXADVAAAMRAAAEAIERRARDVERARSRLSTHPANVTALEALRPIDGAPAAARLALL 694
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 1.990e-16 Identity = 111/436 (25.46%), Postives = 186/436 (42.66%), Query Frame = 1
Query: 853 LVQMRNHLPLLFPFPRLARRYLSYLLSVLETADENASVS----------------LAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHEL---VREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLELLHPYGGESHGESLEYDETPRERGQKAGGSAGIVGDKKRRHQGQAGKGEAKEGAEVVDLSAVVGLGKEDLRSGAVHAAVSRAAAGLIVRETVCYRWSAGLPELCAGAQARLEKLLEDGRLPTDGGVGRYRARVKSVHAAVGRAALEAAARRCRGEKHPGEAAGIDTLRGAEESTAAQRL 2103
L ++ +++PLL PFP LAR +L LL + A A S LA++R+ +++ + P PF+ K R Y A A+R RA + +G+ SL ++ C+ EL+G++ SAY +A++YI +L +R A++ +++ +R W + L++WT V+AA P + L L+ PLA+ +E LS L +P L R Q LAAAA +++P + L+ ++ + +KA S G ++ A++ LGK + G AV A L+ +E YR+SA PEL L+K + + V ++R + + + A AA +R P E G++ LR + +RL
Sbjct: 459 LSRLEHYVPLLVPFPGLARGFLKTLLGLWGGAGAEAKSSGGGTEQEGEEAERVRLLAYLRVRQMAAALPFPFVEGCMK---RLYLAFAKRA----------RAPPASQ--SGKVSLRVMEGCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQ------------HRTKDSVQAVRRWQVVTCLRVWTGVLAAAPGEDELRMLIFPLAQVIEGIVRLSATLRHSPLVFQLVRMRQRLAAAAELYVPCATPLLEVIRSPALF-------------------KKATASTGAP----------------------PNVPAILRLGKTQVDEGRAQGAVVEEALRLLGQEMDLYRYSAAFPELVLPVLGHLKKFAKLTK------VSKWRMMTRGLVETLETRATWAAGKRLELGICPSEVEGLEVLRPEGAPSMRKRL 820
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A7N2LI92_QUELO (Uncharacterized protein n=6 Tax=Fagaceae TaxID=3503 RepID=A0A7N2LI92_QUELO) HSP 1 Score: 88.2 bits (217), Expect = 2.390e-14 Identity = 68/236 (28.81%), Postives = 104/236 (44.07%), Query Frame = 1
Query: 892 FPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLELL----HPYGG 1587
FP L R+Y+ L T V ++F+ L +L L + F+G Y+ Y + + V + L L C+ ELFGV+ P+AY HA+V+I +L A++ D L +EA R++ W F+ L+LWT + A+ +A PL PL + + L P P L + +A A G F+P S L+ +LE+ HP GG
Sbjct: 252 FPSLLRKYIKVALHFWATGGGALPV-VSFLFLRDLCIRLGSDCLDECFRGIYKAYVLNCQFINAVKLQ-----------------HLQFLGNCVIELFGVDVPTAYQHAFVFIRQL------AMILRDALNTKTKEA---FRKVYEWKFINCLELWTGAICAYSSEADFSPLAYPLTQIISGVARLVPTARYFPLRLRCVKMLNRIATATGTFIPVSMLLLDMLEMKELNRHPTGG 460
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A1V9Z026_9STRA (Nucleolar complex protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z026_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.020e-14 Identity = 64/236 (27.12%), Postives = 109/236 (46.19%), Query Frame = 1
Query: 862 MRNHLPLLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLEL 1569
+ ++ + P + AR+ L +S+ + + LAFVR+ EL+T P PFL K Y +Y A+ GV N + + ++ C+ EL+G++ S+Y H ++YI +L +A+ + L+ L +W F+ L++W VVAA+P ++ L LV P+++ L+ L P + Q LA A F+PTS L+ +L L
Sbjct: 271 LSTYMRFVVPCHKTARKMLKCYVSLWGKSLDTQVCLLAFVRVRELATLMPFPFLELCLKALYLSYMRNAKFTNGV----------------NFQHHI-VMGNCVVELYGLDLVSSYQHVFIYIRQLAIAIRKAIAS---------PSADTLKGLLTWRFVNCLKVWAAVVAAYPEESQLKALVYPISQLCFALMRLASVLRYVPLRFQCVKILQQLAFATNTFIPTSPVLLDILAL 480
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A7S4MG20_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MG20_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 4.090e-14 Identity = 73/269 (27.14%), Postives = 124/269 (46.10%), Query Frame = 1
Query: 820 EAQNSSALVEGLVQMRNHLPLLFPFPRLARRYLSYLLSV----LETADENASVSL-AFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGP--------------LVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLEL 1569
EA+ + L L + ++PLL PFP+LA+ +L L + L+T++E V L +F+R+ +L+ +QP PF+ D K +Y Y A + G + +L + C+ EL+ ++ S+Y HA+VYI +L A+ +R +LR + W ++ L+LW V++A A+ G LV PL + + + L P P L R Q LA+++ F+P + L+ L+L
Sbjct: 240 EAKEPALLSFVLKSLSPYVPLLTPFPKLAKSFLQTLSKLWSAPLDTSEEYQVVRLRSFLRVRQLAVTQPFPFVEDCLKSSYLCYARRA-------------KFGTAASVHSALPTLTFMGNCVVELYSLDYASSYRHAFVYIRQLALHLRTAL---------QRRTPESLRVVYCWQYVHCLRLWAAVLSAACASATRGXXXXXXXDEAKLMKSLVYPLTEVILGTARLVPTARHLPLRLHCVRMLQQLASSSESFIPAASLLLEALDL 486
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A2C9U838_MANES (Uncharacterized protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9U838_MANES) HSP 1 Score: 86.7 bits (213), Expect = 7.600e-14 Identity = 66/230 (28.70%), Postives = 102/230 (44.35%), Query Frame = 1
Query: 880 LLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLEL 1569
LL FP L R+Y+ +L T V + F+ L +L + + FKG Y+ Y + + A L+ + LR C+ EL GV+ PSAY HA+V+I +LV +A+ K + R++ W F+ L+LWT + A+ + PL PL + + L P P L R +AA+AG F+P S L+ +LE+
Sbjct: 244 LLAAFPNLLRKYIKVVLHFWGTGGGALPV-VCFLFLRDLCIRIGSDCIDECFKGIYKAYVLNCQFI----------NAAKLQH-------IQFLRNCVVELLGVDLPSAYQHAFVFIRQLVMILRDAITMKTK---------ESFRKVYEWKFINCLELWTGAICAYSSEVDFRPLAYPLTQIISGVARLVPTARYFPLRLRCVRMLNRIAASAGTFIPVSTLLLDMLEM 446
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: UPI000B5D24FC (nucleolar complex protein 2 homolog isoform X2 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI000B5D24FC) HSP 1 Score: 86.7 bits (213), Expect = 9.370e-14 Identity = 66/230 (28.70%), Postives = 102/230 (44.35%), Query Frame = 1
Query: 880 LLFPFPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLEL 1569
LL FP L R+Y+ +L T V + F+ L +L + + FKG Y+ Y + + A L+ + LR C+ EL GV+ PSAY HA+V+I +LV +A+ K + R++ W F+ L+LWT + A+ + PL PL + + L P P L R +AA+AG F+P S L+ +LE+
Sbjct: 546 LLAAFPNLLRKYIKVVLHFWGTGGGALPV-VCFLFLRDLCIRIGSDCIDECFKGIYKAYVLNCQFI----------NAAKLQH-------IQFLRNCVVELLGVDLPSAYQHAFVFIRQLVMILRDAITMKTK---------ESFRKVYEWKFINCLELWTGAICAYSSEVDFRPLAYPLTQIISGVARLVPTARYFPLRLRCVRMLNRIAASAGTFIPVSTLLLDMLEM 748
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Match: A0A067EMM8_CITSI (Uncharacterized protein n=3 Tax=Citrus TaxID=2706 RepID=A0A067EMM8_CITSI) HSP 1 Score: 85.1 bits (209), Expect = 2.210e-13 Identity = 67/226 (29.65%), Postives = 99/226 (43.81%), Query Frame = 1
Query: 892 FPRLARRYLSYLLSVLETADENASVSLAFVRLYELSTSQPMPFLHDAFKGTYRTYRAAAERVGGVIDRTVGGRAGVLRKGGNGEGSLPLLRECLAELFGVEKPSAYLHAYVYIHELVREALEAVVEVDKLGGDKREAGPALRRLRSWGFLQSLQLWTCVVAAHPRKASLGPLVPPLAKALEISFHLSPGLYGAPRTLALARSAQNLAAAAGVFLPTSQYLVGLLEL 1569
FP L R+Y+ L T V +AF+ L +L L D FKG Y+ Y + V + + L C+ EL GV+ PSAY HA+V+I +L A++ D +EA R++ W F+ L+LWT V A+ +A + PL PL + + L P P L R +AA+ G F+P S L+ +LE+
Sbjct: 245 FPSLLRKYVKAALHFWGTGGGALPV-VAFLFLRDLCIRLGSDCLDDCFKGIYKAYILNCHFINAVKLQHI-----------------QFLSNCVVELLGVDLPSAYQHAFVFIRQL------AMILRDAFNVKTKEA---FRKVYEWKFINCLELWTGAVCAYCSEADMKPLAYPLTQIISGVARLVPTARYFPLRLRCVRMLNRIAASTGTFIPVSMLLLDMLEM 443 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12639.1966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12639.1966.1 >prot_H-elongata_contig12639.1966.1 ID=prot_H-elongata_contig12639.1966.1|Name=mRNA_H-elongata_contig12639.1966.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=709bp YSALSDIFANKSSGVRRDMGKISKRQRKFLSKKVLPHRKKGPVRRAVGKDback to top mRNA from alignment at H-elongata_contig12639:4690..8421+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12639.1966.1 ID=mRNA_H-elongata_contig12639.1966.1|Name=mRNA_H-elongata_contig12639.1966.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3732bp|location=Sequence derived from alignment at H-elongata_contig12639:4690..8421+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12639:4690..8421+ >mRNA_H-elongata_contig12639.1966.1 ID=mRNA_H-elongata_contig12639.1966.1|Name=mRNA_H-elongata_contig12639.1966.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4254bp|location=Sequence derived from alignment at H-elongata_contig12639:4690..8421+ (Himanthalia elongata Himel1 dioecious)back to top |