mRNA_H-elongata_contig12639.1965.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12639.1965.1
Unique NamemRNA_H-elongata_contig12639.1965.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: D8LEQ6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ6_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 5.520e-135
Identity = 265/524 (50.57%), Postives = 312/524 (59.54%), Query Frame = 1
Query:  175 PLVGMQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRASTSHG---------ALSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFV--IAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVARE---KTDNALQQL---QNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALS----PLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLL----EGDHVTGSN-----IVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEAATDYGDQ------VFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRR------------SSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEETGIS 1602
            PLV MQSLDNAQDVTVCRNCLGFAGDVISQL+ L+G+ R  CL R    HK     RQR S S+G          LSGLY CL GCGEVYCS  CR EH+ER HRLLCVGPV +EEA +HPL  FR+HA QTNEIFLL GEVMAQIA+AF   +    GAD     +   +     A+APFADFVQEPWWDVAVAR+   KTD +        +G   + N    AAAL   LR+LC ES++LLR A +    PLP  LE+ +T E  GR++GMFEQNNVGIR  SP+P +LR+LL    EGD    +      ++ E A LV  +           DD+ E       D  D  P  C V       SP      +F A     EGS     +   ILK A    G++      +F PLDGTALY L+CCMNHSCRPNCLV YP RR            +  G   ADPLVA +VLLEDV AGEELTQSY+ +EM L +RR ALEDYGF C CPRC+EE  ++
Sbjct:   13 PLVAMQSLDNAQDVTVCRNCLGFAGDVISQLDNLTGLNRPECLAR----HK----ARQRCSKSNGYDDQTAPAHELSGLYECLGGCGEVYCSPRCRSEHWERCHRLLCVGPVPDEEAQSHPLVEFRIHAMQTNEIFLLVGEVMAQIATAFTEKVREKPGADGSGGDLDVDDEISA-ARAPFADFVQEPWWDVAVARDGRDKTDGSSPPPCTPDDGCNGDENVCAAAAALPGTLRALCGESSALLRRAFARSVGPLPAPLEQALTAEMFGRVVGMFEQNNVGIRAPSPIPEVLRELLSASSEGDSDDATRGISREVLGEVAQLVGEV----------MDDEYEXXXXXXXDEGDL-PMICRV-------SPR-----TFVAGDDALEGSGMGPGEAETILKVAMDGGGEEGEEVVSLFPPLDGTALYPLICCMNHSCRPNCLVRYPGRRREKKATADPEKAAGAGAGSADPLVAQLVLLEDVPAGEELTQSYVTREMGLVERREALEDYGFFCTCPRCLEEEAMA 504          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A6H5KDI3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI3_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 2.410e-131
Identity = 260/527 (49.34%), Postives = 311/527 (59.01%), Query Frame = 1
Query:  166 VRRPLVGMQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHK--GDNAVRQRASTSHGALSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFV--IAASTGADPRPATVSESERAGV-------TAQAPFADFVQEPWWDVAVAREKTD----NALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDA----LSPLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLL----EGD-----HVTGSNIVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEA--ATDYGDQV---FTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSS------------TGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEETGISQGS 1611
            + RPLV MQSLDNA DVTVCRNCLGFAGDVISQL+IL+G+ R  CL R+  R +    N    + + +H  LSGLY CL GCGEVYCS  CR EH+ER HRLLCVGPV +EEA +HPL  FRVHA QTNEIFLL GEVMAQIA+AF   + A  G                        A+APFADFVQEPWWDVAVAR+  D    ++L    +      + ++ AAAL   LR+LC ES++LLR A    L PLP  LE+ + TE  GR++GMFEQNNVG+R  SP+P +LR+LL    EG+       T  +++ E A LV                +V DE +  ++  D    C             C  GD     G  EE S     +   ILK A    + GD+V   F PLDGTALY L+CCMNHSCRPNCLV YP RR                   ADPLVA VVLLEDV AGEELTQSY+N++M L +RR+ALEDYGFLC CPRC EE  I+  S
Sbjct:   44 IERPLVAMQSLDNALDVTVCRNCLGFAGDVISQLDILTGLNRPECLARYKARQRCWDSNGHDDQTAPAH-KLSGLYECLGGCGEVYCSPRCRSEHWERCHRLLCVGPVPDEEAQSHPLVEFRVHAMQTNEIFLLVGEVMAQIATAFTEKVRAKPGGXXXXXXXXXXXXXXXDVDDEISAARAPFADFVQEPWWDVAVARDGRDATDGSSLPPCTSEDGCSGDENSCAAALPGTLRALCGESSALLRRAFARALGPLPAPLEQALMTEMFGRVVGMFEQNNVGVRAPSPIPEVLRELLSASSEGNDDCPTRGTSRDVLGEVARLV---------------GEVMDEEYEEEEEGDLQMICPVAPR-------KCVPGD-----GALEE-SGMGQGEAETILKAAIGGDEEGDEVVSLFPPLDGTALYPLICCMNHSCRPNCLVRYPGRRREKKATVDPENAAVASAASADPLVADVVLLEDVPAGEELTQSYVNRDMGLVERRDALEDYGFLCTCPRCSEEEAIAVAS 541          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A835Z6Z6_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z6_9STRA)

HSP 1 Score: 219 bits (558), Expect = 7.030e-60
Identity = 178/510 (34.90%), Postives = 214/510 (41.96%), Query Frame = 1
Query:  166 VRRPLVGMQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRASTSHGALSGLYRCLQGCGEVYC---------------------------------SAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPPELEE---VVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLLEGDHVTGSNI--VEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRC 1581
            +RRPL  MQ+L N Q+V VCR C+ F G    QLE+L G  R  CLE          A  +      G LS +  C   CGEV C                                 SA C   H+ R HR LCVG VSE EA  HPL  FR HA  TNEIFLL  EV+A              D      +  E     A AP+A FV+EPWW+VAV R            GAAA        AAL   LR L  ES                    ++  E + R IG FEQNNVG+R +SPL +               +  V  A      + A +  D  G D                +  C E    D  D+            G  + G        V+IL+E   D    +FTPLDGTALYSL+CCMNHSC P C + Y       G   A+PL A +V   D+ AGEEL QSYI+    L +R  ALE+YGF C C RC
Sbjct:   31 LRRPLAVMQTLSNVQEVMVCRECMAFVGTTRMQLELLRGRGRMQCLEAALHAQAQGTATAE----EEGFLSDIVPCAGNCGEVDCILNTQLEHVIKPXXXXXXXXXXXXXXXXXXXXXSAACAALHWRRSHRRLCVGGVSEAEADAHPLVRFRRHAVATNEIFLLVAEVVA--------------DQLGRLETNPEGGPEAALAPYAVFVREPWWEVAVDRA-----------GAAA-------TAALRVTLRRLVAESXXXXXXXXXXXXXXXXXXXXLLEPEHLARTIGTFEQNNVGVRAASPLAAAFAAAXXXXXXXXDALPAVRAAXXXXXXMIAAAAYDDGGSDGXXXXXXXXXXXXXGEDCACAEC---DDDDTGGQGGFQGXXXXGMSDGGGEAAALSLVQILEEYDAD---ALFTPLDGTALYSLICCMNHSCDPCCEIKYVG-----GAGAANPLRAAIVAKRDIAAGEELFQSYIDAAAPLSERAAALEEYGFACDCARC 493          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A4D9D6X6_9STRA (SET domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6X6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.190e-55
Identity = 172/502 (34.26%), Postives = 234/502 (46.61%), Query Frame = 1
Query:  187 MQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRASTSHGA-LSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPP--------ELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLLEGDHVTGSNIV------------EEAASLVIML-----DAGS-----DTDSSGCDDQVEDETWTSDDSHDRNPGC---CEVKSGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEA--ATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKE-MSLQQRRNALEDYGFLCRCPRC 1581
            MQSLDN Q V  C  C  F G     L +L+    +  L   +E  +    +   A+T  GA L+ L  C   CGE+YCS +CR EH++RGHRLLCVG + E EA +HPL  +++HA +TNEIFLL  +V+A + + F    S G D   A             +PF DFVQ PWWDVA   +   +                   +A   +LR L + +A LLR AL   P          +E +V+ + +  +IGMFEQNNVGIR  + L S L D L  +  T S  V            EE             D G+     D+  SG D    +        H ++ G    C V S     SP+ +                         L EA  A     ++F+ +DGTAL SL+CCMNHSC+ NC V     R   GV  A PL+A +V +E +  G EL QSYI  +  S++ RR +L++YGF+C+C  C
Sbjct:    1 MQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEEESRR----MEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALVLTRFE---SNGGDLSAAL------------SPFRDFVQRPWWDVATNPDPVRDT------------------SAFQDMLRGLVKVAADLLRQALLTHPGAPCATYCGSVESIVSPDFVAAVIGMFEQNNVGIRRETVLSSFLVDHLMPNCTTDSRQVYLQLLGRILEDWEEGXXXXXXXXXXAPDGGNEMCVADSGISGADANGHEH------GHHQHLGAVPPCRVSSRLPPASPSSAL-----------------------ALVEACLAKSQTSEIFSAVDGTALLSLICCMNHSCQANCEV-----RWVGGVGGA-PLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRTSLKEYGFICQCALC 430          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A7S3M3P4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3P4_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.250e-50
Identity = 149/486 (30.66%), Postives = 229/486 (47.12%), Query Frame = 1
Query:  172 RPLVGMQSLDNAQDVTVCRNCLGFAGDVISQLEILSG-VPRQLCLERFDERHKGDNAVRQRASTSHGALSGLYRCLQGCGEVYCSAECRVEHFE-RGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLLEGDHVTGSNIVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVK--------SGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEAATDYG-DQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEETG 1596
            +P   +Q+L N + V VC  CL   G +  QL +L G V +Q   E       G+  +    S+S   +S    C   CGEVYCS +CR  H+  +GH+ LC G ++E+EA  HPL  F++HA  TNEIFL+  +V A +        STG +   A         + A+ P + +V+E WWD A+    T    + L               A    L++L +++  LL + L         +++ E M R IGMFEQNNVG+++ +PL   + +++ G       +  +A +L  + DA +        D +ED+    D+                      D  D     +G+  T+A      ++  V + +  L+E   + G D +F PLDGTA Y+L+C +NHSC PN  V+Y              L A ++ L  ++ GEEL QSYI++      R+ AL+DYGF C C +C+ E G
Sbjct:   41 KPFHFLQTLPNRKSVAVCTTCLKCLGPLSMQLGVLQGTVSKQNLKEEI-----GNFMLLPNESSSCQVVS----CSCNCGEVYCSEQCREHHWSVKGHKFLCTGLITEDEADDHPLINFKIHAMTTNEIFLMVADVFASMCCHLDSLVSTGVELNVAF-------DIVAR-PLSGYVRELWWDAAI----TPKGYKPL---------------AFKKSLKTLVKDTYELLSEVLQLEERGYSVLLSEEYMSRTIGMFEQNNVGVQMKTPLAEYVENIVSGA------MTADAPTLAFIADAATQIL-----DNIEDDDMCLDEDCGEGXXXXXXXXXXXXXXTGSDMEDENTAEQGE--TSAAMETSLAAGPVDENLTALRELIDEQGMDTLFPPLDGTAFYALICRINHSCDPNVRVVYVNSPEFG-------LQATLIALRPIQPGEELLQSYIDQFQPFLVRQKALKDYGFQCECTKCVAERG 470          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: B7S403_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S403_PHATC)

HSP 1 Score: 179 bits (454), Expect = 4.010e-44
Identity = 156/486 (32.10%), Postives = 219/486 (45.06%), Query Frame = 1
Query:  166 VRRPLVGMQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRASTSHGALSGLYR---CLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEV-MAQ---IASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALS--PLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLP-SMLRDLLEGDHVTGSNIVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAA-GTREEGSSRRVHDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEE 1590
            + RPL+ + SL+N  D   C  C  F G  +  L+            R+       +A            S  YR   C + CG VYCSA+C  + +   HR LC G      AP HPL  F+  A QTNEI LL     +AQ   +     +  +T + P  +  +       TA + + DF   PWWDV  A E+  N              F N A      LR LC+++A  L  AL+  P+PP     +T   + R IG  EQN +GIR    L   + RD +  D     +IV+    LV     G+D++S            + +  HD       + S D     +     +F A     E+G+ R   D     ++   D  D +F PLDGTA+Y+  C MNHSC PN +V+Y +    TG     PLVA+ V L D++AGEELT SYI+  +   +R+ ALE+YGF+C CP+C  E
Sbjct:   40 IERPLLALPSLENRPDAWTCAACHAFLGGPVRALQ-----------HRWSRSPTPSSASXXXXXXXXXXHSEEYRTVPCRRNCGFVYCSADCERDVWAAHHRYLCTGHC----APDHPLVQFKTLAVQTNEILLLVATWWVAQHLDVTRTRTLPDTTESVPVQSRTTXXXXXNPTASSRYLDFCMTPWWDVISASEQPGN--------------FTNDAV----TLRRLCDDAAGCLNAALAETPIPP-----LTALDVARRIGACEQNAMGIRQRHVLARDIFRDRVRRD--CHDDIVQ---CLVQAGFIGNDSNSDXXXXXXXXXXXSVEKVHDTTGSHSSIPSDDGEWDYSVDEIATFLAGLFLDEDGAVRDQADQSLEERDTTGDDLDYIFPPLDGTAMYATTCKMNHSCDPNVIVLYKR----TGWGALHPLVAYCVALRDIQAGEELTISYIDANVPWAERQEALENYGFVCECPKCQCE 478          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: F0XYZ4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ4_AURAN)

HSP 1 Score: 161 bits (408), Expect = 2.000e-37
Identity = 160/550 (29.09%), Postives = 220/550 (40.00%), Query Frame = 1
Query:  121 GVECIHDNAVSR*GAVRRPLVGMQSLDNAQDVTVCRNCLGFAGDVISQLE-ILSGVPRQLCLERFDERHKGDNAVRQRASTSHGALSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLL--------------EGDHVTGSNIVEEAASLVIMLDAGSDTDSSGC---------------DDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRR-VHDPVEILKEAATDYGDQV----------------------FTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGV----KRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEETGI 1599
            G+    D A      V  PLV MQ L N     VC  CL F       LE + +G   ++  +    R  G  A                RC  GCGE+YCSA CR  H  R HR LCVGPV+E +A   PL  +++ AT++NEI  LA +V+A        A + GA                A A F  F + PW D  VA            + AA   +     A L   LR LC ++A LLRDAL+         VT E + R++G FEQNNVG+R+  PL                      +G  V  +  +E+   L     A +    S                  + + +  + + D  +        ++G          GD       R EG+  R +   + +      D GD                          PL+GTALYS +CC NH+C  +C V+Y       G     +   PL A +V    V AG+ELT +Y++ +   Q+RR AL DYGFLCRC RC+E   +
Sbjct:  683 GLFAARDFAAGETILVEAPLVAMQDLANRHAALVCGECLAFLDLGRDLLEAVAAGASPRVAADAAVARGGGPVA----------------RCADGCGELYCSAACRDAHRRRCHRALCVGPVAEADAAADPLVRYKILATESNEILFLAADVVAA-------ALADGA----------------AAAAFLPFTRVPW-DRVVA------------DAAALRGDDARDGALLGEALRRLCGDAAPLLRDALAARGFANAADVTPEWLARIVGTFEQNNVGVRLRHPLDDXXXXXXXXXXXXXXXXXXXXDGGAVARAASLEDVDRLAAAPGAVAVVKFSAAWCAPCRAMAPAFAALAEALPEARFVAVDVDEVPDAAARFEAGALPTFVLLRDGDELA----RVEGADERALRAQLALAGCPPPDDGDADXXXXXXXXXXXXXXXXXGGAYGMPPLEGTALYSTICCANHACDQSCDVLYAAPSEPGGEPGPGRFGAPLRASLVARRAVAAGDELTIAYVDTDAPWQERRAALADYGFLCRCSRCLEPVAL 1176          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A7S4A9H4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9H4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 7.760e-37
Identity = 146/527 (27.70%), Postives = 223/527 (42.31%), Query Frame = 1
Query:  166 VRRPLVGMQSLDNAQD-VTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRAS-----TSHGALSGLYRCLQGCGEVYCSAECRVEHFE-RGHRLLCVGPVSEEEAPTH--------------------------------------PLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPPELEEV--VTTERMGRLIGMFEQNNVGIRVSSPLPSMLRDLLEGDHVTGSNIVE--EAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHD-RNPGCCEVKSGDRADSPACSRGD--SFTAAGTREEGSSRRVHDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRRNALEDYGFLCRCPRCMEE 1590
            V RP++ MQS  N  +   VC  C+ F G     + ++S      CLE    ++   + + +  +     +  G    LY C   CG +YCS EC+ + ++  GH+ LC G + + + PT                                       PL  F+VHA  TNEIFLL    + +I    +               + +     +   + DF    WWDV    E+   + Q+       ++N      +L  +L+ LC+ES S L   L    P+ ++   +T   M RLIG  EQN +GIR    L   +    +  H     ++   E A ++   D   D DS  CD+  +D     D + D  N G  E    D  +    S  D  +F A+ T+            ++      D  D++F PLDG + YS+   MNHSC PN +++Y  R    G  R  PLVA+VV L+D+  GEEL  SYI+     ++R+ AL +YGF C C +C +E
Sbjct:   37 VERPVIAMQSTGNVHEGALVCSYCMAFCGIPEQCIRVISDPS---CLEEITTKYSSQSRINEEDNGDVNNSVIGDPHALYCCRHNCGHIYCSLECQQDDWKWGGHKELCTGMIPDPDEPTSNQEQLQLGTNTLTGIEDEYVNDGLSPIESVDDATTPIDPLLQFKVHARNTNEIFLLVATWLVRILKHDI------------PYHDDDNMNTHS---YTDFQMNTWWDVKAKEEEILKSKQEDSEEIYEKDNDLG-GESLEDILKELCKESHSYLSQTLKTRLPQSQDSPWLTPVGMARLIGSLEQNCLGIRRKHALQRNIMCDSDLRHEFHPELIRCLEGAGMIGDGDDKFDDDSDPCDE--DDNDGDIDTNLDVNNTGAYE--GADECEGSNYSPDDIAAFLASLTQ------------DLTSGCVFDEWDEIFRPLDGVSHYSITTKMNHSCDPNVILVYKTR----GWGRDHPLVAYVVALKDIAEGEELAISYIDSGDPYEERQAALANYGFSCTCSKCKQE 524          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A1Z5KPJ5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPJ5_FISSO)

HSP 1 Score: 151 bits (381), Expect = 2.810e-34
Identity = 146/489 (29.86%), Postives = 211/489 (43.15%), Query Frame = 1
Query:  172 RPLVGMQSLD-NAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDNAVRQRASTSHGALSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALS------PLPPELEEVVTTERMGRLIGMFEQNNVGIRVSSPLPSML--RDLLEGDHVTGSNIVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRRV------HDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYI-NKEMSLQQRRNALEDYGFLCRCPRCMEE 1590
            RP++  QSL  N Q   VC  C GF G+    ++            RF  +                  + +  C Q CG VYC+ EC    +   HR LC G ++++E   HPL  F+  A ++NEI LL  +        + I       P  +T S+           + DF   PWW+VA         L+Q Q GA AE       AAL+  +R LC+++A LL   L        +PP     +T   + + +G  EQN +G+R   PL   +  RD  E  H   SNIV+  A    +   G D     CD   E+         +      E       D  A    + +     +E+G    V       D    L     D  DQ+F PLDGTA+Y+  C MNHSC PN L++Y +  S        PL    + ++D++ GEELT SYI +   SL++R+ AL +YGF+C C +C++E
Sbjct:   33 RPMLFQQSLGLNTQQAWVCHACHGFVGNAADAMQ-----------HRFPSKSLA------------ACKTIITSCRQKCGYVYCNKECEDAAWRMHHRFLCTGNIADDEE--HPLVLFKQLAVESNEILLLIAQ--------WWILEHHQIPPGESTASK-----------WIDFCMNPWWEVATLE------LEQ-QPGAFAE------TAALNQSIRKLCQDAADLLNQVLQVTEHTHTIPP-----ITALDIAKRVGACEQNAIGVRQRHPLCREVFDRDFREMYH---SNIVQCLAEAGFI--GGDD-----CDSDCEEXXXXXXQKTNAKSAMVEGDWDYSVDEIAKFLSELYI----KEDGMVTDVATESPSDDDAPSLTAQEGDDLDQIFPPLDGTAMYATACKMNHSCDPNVLLVYHRNPSWQR-----PLTIFALAIKDIQEGEELTISYIEHSNKSLEERQQALVNYGFVCTCSKCVKE 440          
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Match: A0A1Z5JFN8_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFN8_FISSO)

HSP 1 Score: 144 bits (363), Expect = 4.810e-32
Identity = 128/404 (31.68%), Postives = 190/404 (47.03%), Query Frame = 1
Query:  391 CLQGCGEVYCSAECRVEHFERGHRLLCVGPVSEEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPATVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENNFHNQAAALSSVLRSLCEESASLLRDALSPLPPELE-EVVTTERMGRLIGMFEQNNVGIRVSSPLPSML--RDLLEGDHVTGSNIVEEAASLVIMLDAGSDTDSSGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTREEGSSRRVHDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNCLVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYI-NKEMSLQQRRNALEDYGFLCRCPRCMEE 1590
            C Q CG VYC+ +C    +   HR LC G ++++E   HPL  F+  A ++NEI LL       IA  +++            +S  ER     ++ + DF  +PWW+VA    K        Q GA AE    NQ+      +R+LC+++A LL   L          ++T   + + +G  EQN +G+R   PL   +  RD  E  H   SNIV+  A    +     DTD +  DD+ E     +    D +    E+    +  S    R D        E  S     D    +     D  DQ+F PLDGTA+Y+  C MNHSC PN L++Y    S+   +R  PL    + ++D++ GEELT SYI +   S ++R+ AL +YGF+C C +C +E
Sbjct:   84 CRQKCGYVYCNKDCEDAAWRMHHRFLCTGNIADDEE--HPLVLFKQLAVESNEILLL-------IAQWWIL--------EHHQISSGERT----ESKWNDFCMKPWWEVATLELKH-------QPGAFAETATLNQS------IRNLCQDAADLLNQVLQMTEHNHTIPLITALDIAKRVGACEQNAIGVRQRHPLCREVFDRDFREMYH---SNIVQCLAEAGFIGGDDCDTDCADEDDEQEVTAKLAMIDRDWDYSVDEIA---KFLSELYIREDGMVTDVATETPS-----DDAPSMTAPEGDDLDQIFPPLDGTAMYATACKMNHSCDPNVLLVY---HSNPSWQR--PLTIFALAIKDIQEGEELTISYIEHSNKSCEERQQALVNYGFVCTCSKCTKE 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12639.1965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEQ6_ECTSI5.520e-13550.57SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KDI3_9PHAE2.410e-13149.34SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z6Z6_9STRA7.030e-6034.90SET domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D6X6_9STRA4.190e-5534.26SET domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S3M3P4_9STRA1.250e-5030.66Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B7S403_PHATC4.010e-4432.10Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
F0XYZ4_AURAN2.000e-3729.09Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4A9H4_9STRA7.760e-3727.70Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Z5KPJ5_FISSO2.810e-3429.86Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5JFN8_FISSO4.810e-3231.68Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12639contigH-elongata_contig12639:2..4400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.9
Seed ortholog evalue1.6e-114
Seed eggNOG ortholog2880.D8LEQ6
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-26_000740.1
Exons5
Model size2084
Cds size1434
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929749.0239384-UTR-H-elongata_contig12639:1..4651622929749.0239384-UTR-H-elongata_contig12639:1..465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 2..465 -
1691679142.5456681-UTR-H-elongata_contig12639:1..4651691679142.5456681-UTR-H-elongata_contig12639:1..465Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 2..465 -
1622929749.0978675-UTR-H-elongata_contig12639:3178..31911622929749.0978675-UTR-H-elongata_contig12639:3178..3191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 3179..3191 -
1691679142.598937-UTR-H-elongata_contig12639:3178..31911691679142.598937-UTR-H-elongata_contig12639:3178..3191Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 3179..3191 -
1622929749.1324553-UTR-H-elongata_contig12639:4227..44001622929749.1324553-UTR-H-elongata_contig12639:4227..4400Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 4228..4400 -
1691679142.6068373-UTR-H-elongata_contig12639:4227..44001691679142.6068373-UTR-H-elongata_contig12639:4227..4400Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12639 4228..4400 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929749.037554-CDS-H-elongata_contig12639:465..15601622929749.037554-CDS-H-elongata_contig12639:465..1560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 466..1560 -
1691679142.5584884-CDS-H-elongata_contig12639:465..15601691679142.5584884-CDS-H-elongata_contig12639:465..1560Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 466..1560 -
1622929749.0536182-CDS-H-elongata_contig12639:1823..19861622929749.0536182-CDS-H-elongata_contig12639:1823..1986Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 1824..1986 -
1691679142.5683613-CDS-H-elongata_contig12639:1823..19861691679142.5683613-CDS-H-elongata_contig12639:1823..1986Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 1824..1986 -
1622929749.0700521-CDS-H-elongata_contig12639:2679..27771622929749.0700521-CDS-H-elongata_contig12639:2679..2777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 2680..2777 -
1691679142.5780237-CDS-H-elongata_contig12639:2679..27771691679142.5780237-CDS-H-elongata_contig12639:2679..2777Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 2680..2777 -
1622929749.0866778-CDS-H-elongata_contig12639:3100..31781622929749.0866778-CDS-H-elongata_contig12639:3100..3178Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 3101..3178 -
1691679142.5876434-CDS-H-elongata_contig12639:3100..31781691679142.5876434-CDS-H-elongata_contig12639:3100..3178Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12639 3101..3178 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12639.1965.1prot_H-elongata_contig12639.1965.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12639 466..3178 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12639.1965.1

>prot_H-elongata_contig12639.1965.1 ID=prot_H-elongata_contig12639.1965.1|Name=mRNA_H-elongata_contig12639.1965.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=478bp
MQSLDNAQDVTVCRNCLGFAGDVISQLEILSGVPRQLCLERFDERHKGDN
AVRQRASTSHGALSGLYRCLQGCGEVYCSAECRVEHFERGHRLLCVGPVS
EEEAPTHPLFAFRVHATQTNEIFLLAGEVMAQIASAFVIAASTGADPRPA
TVSESERAGVTAQAPFADFVQEPWWDVAVAREKTDNALQQLQNGAAAENN
FHNQAAALSSVLRSLCEESASLLRDALSPLPPELEEVVTTERMGRLIGMF
EQNNVGIRVSSPLPSMLRDLLEGDHVTGSNIVEEAASLVIMLDAGSDTDS
SGCDDQVEDETWTSDDSHDRNPGCCEVKSGDRADSPACSRGDSFTAAGTR
EEGSSRRVHDPVEILKEAATDYGDQVFTPLDGTALYSLVCCMNHSCRPNC
LVIYPQRRSSTGVKRADPLVAHVVLLEDVRAGEELTQSYINKEMSLQQRR
NALEDYGFLCRCPRCMEETGISQGSVL*
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mRNA from alignment at H-elongata_contig12639:2..4400-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12639.1965.1 ID=mRNA_H-elongata_contig12639.1965.1|Name=mRNA_H-elongata_contig12639.1965.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4399bp|location=Sequence derived from alignment at H-elongata_contig12639:2..4400- (Himanthalia elongata Himel1 dioecious)
TAGACTTGACGGAGGGGCGCGGGCGAGGGCTTTTCATCGCTAAGGCCGGA AAGGCTGGCGAGACTGTCCTGACAGAGAGGTGCGACCCTTCTCTACCTTG GTGCACGCGACGCCTCGCTTGGTGTTGAGTGCATCCACGACAACGCCGTG TCCAGATGAGGCGCAGTTCGAAGGTGCGCATTGAACGATCATCAGCACCG GAGAACAAGTAATATAAAAAATACAAAGTACTATCGACGCGTAAAATTGT GTGGCCCAGGATTGAGCTGACTCGGTACACTTGAACACTCCCGTCGGCTG TATTGTTTTGAAGTTGCACACTCGTCTAGGACATACATGTCACGATCTTA CCTGGGAAGTTCACCTTCTGCCGCACCACAGTGGTGGCTGTTCTTTCAAT TTTATCTATTGTAAGGATACATGGGCCTCGTGGTTTGTGCCACCCTCACA ATATTTTGGTTAAGAGAAACATGGCCGCATAATTATAATTTCGTCAAAGC GAAATGCGCCTTACAGAAACTAAAATAGCTGGGCTTGTTGGCGGGGAAAA TACCCAAATCGGTATATTCCACGAGTCGTATCCGAAGGCGGTCTCCTCTG ACACAGCATTTAAAAAAAAAAAAAAAGGTAGCAGACACGCTTATAAAGTC AAAATAATCAGGCAGCTTTTTGTTTTGGGTGTGTATTGATTGATTTGATT GTATTCTGTGCGTTTTTTATAGAGTGTTACGACTGTAAAACAGCGCACAT AATCCTTGTGGTATGTGGATCTTGCTTGCGATCATCTCAGAAATTAAGAT ACGATCGTAATACTAGGACCGCGCCAGACATCAGGCAGCCGACAGCGACC CCTCAATTCGCTGCTCAGGCGTTCTCCGGCGCGAACATCAAACATTACAA CACGTTCCATACCACCGCCCTCCCTGATCGGTCTTGGGGCAAATGTGTAC CAGCTGTCGAACTCTGGCCTCCGGGCTGGAGGTCCAGGGGTGCACGCAGC CTCTAGGCTTTGATCGTTGGCAGAAGCGGCAATTCGGAGCTTGACATTTC CTTAATCTACGGAACACATTCCGTATGATTTAATACGAAGGTTATACGAG AAACCCTTAAAAACAGTCTTTTGTCCGGTGATGTGATTGTGTTCTTTGTT TGATTTAACAGCTCTTCTTTTACGTTTCCCGTTTGGTGGATAACTGATCG GCATGTCAGGCCCCTCGTTGGTATGCAAAGCCTGGACAACGCCCAAGACG TGACTGTATGTCGCAATTGCTTGGGCTTCGCTGGTGACGTCATCTCGCAG GTAACAACTTACATGACCATAGGCGAATTGCTTGGTTGTTTACCCCTCTC CGTCGCTGGAGGGCGACATAATTGACGACCCTAAAATATGTGCAGGCGTT CATAAAAAAGCGGGCCGGGGTTATTTTATATCCCAAATACCGTTCTATGT TATAGTATTAATAGTACACTGGACCGATCGCGCCTAGACCTATCAATAGC TGAGGTGTATGTACAGTACTCTGTTCCGTTGAAAAAGCGGCAGGAGAGTT TTCGAAAAAAAACGACCTCCAGAAACATCATTGCGTACTTCCACTAATGG CTGCGTTATCTTTCTTGTGGCAGTTGGAGATTCTGTCTGGAGTACCACGC CAGTTATGCCTTGAACGCTTCGACGAACGGCATAAAGGCGACAATGCGGT AAGGCAAAGGGCGTCAACTAGGTTTATATCATTGAGCGCCAAATGACCCT CGTTCTTCCTACTCTTGAAAAATAAATTAATCTTACGTTTTTATTTTTGA TTATTATATGTTTCTTGGTTCTCGCCTGAATGATCGATTAACAAATACAA AACTTGTTTTTGAAAAGCGATGTAGTCTGTTGCGAATTGGCCAGGCGTGC TGATGTATTTCCTTGTGCTGCCAGGGAAATTATATTCTTTCTAATAATAC CGTCGTGTAAACAAGCGCGAAGGGGGCGCTGATGATGAAAAATACAATAT ACGCTATTCTTATTTTACCGCCTTCTCGAAAGGCGTTGTGATGAGCATCC TTCACTTGCTGAGCCCCCTCCGTAGCTCCCACCATTCCGGCGACTTGACT CATTTCACCGACGGTTGTGACTTTCGTAATTATCTTTGATGTAGGTCAGG ACGTTGTAAACTAATGAATTTTGTTTGTCGCGTAACTACTGTGCCGATAG AGCTTCCTTCCCCGCCCTATTCTCCTGTGAGGAAAGTTTGTCGAGTTTTC GTTTTTTGGGTAAGCCATGTTCCAGTAGACGTATAGTGAAAGCGTAACCG GTGTTGTCCAACCTGGCGCGTAAATTCCCCTCTCCATGTCTGTCTTACAT ACGGCGCAAACGTGTCTGCTGCTCGACTTGCCATGCCCCATCTTCCCAAG GCGTCGAAATCAAGCCATGGTGCCTTGTCAGGCTTGTACCGTTGTCTGCA GGGGTGCGGCGAGGTATACTGTTCTGCCGAATGCAGGGTGGAGCACTTCG AACGCGGTCACCGCTTGCTCTGCGTTGGGCCCGTGTCCGAGGAAGAGGCA CCCACTCACCCCCTCTTTGCGTTTCGGGTAAGAATGTAGCTGTTGAATGC GTGATAGGAGGTGGTTTTCCCGAGCAGCACACAATGCTTGTATTCTGGGT CTTGGTAACAACGGAAAGTTGATTGATGTCCCTGTATGTGCTTTTTTAGC TATCATTTCTTACCTTTTTTGCGGTTTTGTACATGAGTTTGTAGCGCCGG TAAGATGTTTTGTCCGCGGCCGATTCAAGAGCCAACCTTCCCGCCCCCCG TCCCAACAACGCCTCACCGAAACAAATTTTGCGGTAACAGGTTCACGCTA CGCAGACAAACGAGATCTTCCTCTTGGCGGGAGAGGTGATGGCGCAGATC GCATCGGCATTTGTCATTGCTGCCTCAACAGGTGCAGACCCGAGGCCAGC TACTGTTAGCGAATCGGAGAGGGCTGGCGTAACTGCACAAGCGCCTTTTG CGGACTTTGTCCAGGAGCCGTGGTGGGACGTTGCGGTGGCACGAGAAAAA ACAGACAATGCCTTGCAGCAATTGCAAAACGGAGCCGCCGCGGAAAACAA TTTTCACAATCAAGCAGCTGCTCTGTCTAGCGTCCTTCGGTCCCTCTGCG AAGAGTCGGCATCGCTGCTGCGAGACGCGCTGAGCCCTCTACCTCCCGAG CTGGAGGAAGTGGTCACCACAGAGAGAATGGGCCGATTAATAGGAATGTT CGAGCAAAATAACGTTGGCATCCGGGTTTCTTCTCCCTTACCTTCGATGC TAAGGGACTTGCTGGAGGGAGATCACGTTACTGGTAGCAACATTGTCGAA GAGGCGGCCTCCCTGGTGATAATGTTGGATGCGGGATCGGACACAGATTC TAGTGGGTGTGACGACCAGGTTGAAGATGAAACGTGGACGTCTGATGACA GCCACGACCGCAATCCTGGATGTTGCGAGGTGAAATCCGGGGATAGAGCA GACAGCCCCGCTTGCTCCAGGGGAGACAGCTTTACTGCGGCGGGCACCAG GGAAGAAGGATCTTCAAGAAGAGTACATGATCCAGTAGAAATCCTGAAAG AAGCTGCGACCGATTACGGTGACCAGGTATTCACGCCCTTGGACGGAACC GCCTTGTACTCTTTGGTTTGCTGCATGAACCACTCTTGTCGACCGAATTG TTTGGTTATTTACCCCCAGAGGCGTTCTAGTACAGGAGTCAAAAGGGCTG ACCCCCTGGTTGCACATGTTGTTTTGCTGGAGGATGTTCGGGCCGGCGAA GAGCTTACGCAGAGCTATATTAACAAGGAGATGAGCCTGCAGCAGAGGAG GAACGCCCTAGAGGACTACGGGTTCCTCTGTAGATGCCCGCGTTGTATGG AAGAAACGGGGATTTCCCAAGGGTCTGTTCTGTAAGCTAGGGGGAGGTAT TTACGAATTCAAATAAACTTTTTGCGACTTGTGACAGGCCTCTGTCGATA GCCATCAGGATCGTTTCGCAAATATGAACTTCGTTCAGCTCAACATTCAA GTAAATAACCTACCCGCATCCGAGTGAAAATATAGGAAAGAGTTTGAATA AACGCGTTTTACTAAATGACGTCGACTGTGGAATGGGCATCACATGTAGC AGGGAGTAAGCGCCTGTACTGTGGTTAAAATATACGTATAATTACAAAGG AGTTTCTCATACCATTTTCCGCGACCTTCCATTTCTGCGTACCTACGGAT AGCACAAAGAGTCGCCGACACTGAGCCAGCAGTCAAGGTAGCTTAAGTAA CGGGTGCAGTCTAATCAGGAAACCTCAGGCAATTATTGTTGCCTCTTTTT TCCCACCCACTACTATTGGGAGCTTTTTTCTATTGAAAAAAAGTAAATA
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Coding sequence (CDS) from alignment at H-elongata_contig12639:2..4400-

>mRNA_H-elongata_contig12639.1965.1 ID=mRNA_H-elongata_contig12639.1965.1|Name=mRNA_H-elongata_contig12639.1965.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2868bp|location=Sequence derived from alignment at H-elongata_contig12639:2..4400- (Himanthalia elongata Himel1 dioecious)
ATGCAAAGCCTGGACAACGCCCAAGACGTGACTGTATGTCGCAATTGCTT
GGGCTTCGCTGGTGACGTCATCTCGCAGATGCAAAGCCTGGACAACGCCC
AAGACGTGACTGTATGTCGCAATTGCTTGGGCTTCGCTGGTGACGTCATC
TCGCAGTTGGAGATTCTGTCTGGAGTACCACGCCAGTTATGCCTTGAACG
CTTCGACGAACGGCATAAAGGCGACAATGCGGTAAGGCAAAGGGCGTCAA
CTAGTTGGAGATTCTGTCTGGAGTACCACGCCAGTTATGCCTTGAACGCT
TCGACGAACGGCATAAAGGCGACAATGCGGTAAGGCAAAGGGCGTCAACT
AGCCATGGTGCCTTGTCAGGCTTGTACCGTTGTCTGCAGGGGTGCGGCGA
GGTATACTGTTCTGCCGAATGCAGGGTGGAGCACTTCGAACGCGGTCACC
GCTTGCTCTGCGTTGGGCCCGTGTCCGAGGAAGAGGCACCCACTCACCCC
CTCTTTGCGTTTCGGCCATGGTGCCTTGTCAGGCTTGTACCGTTGTCTGC
AGGGGTGCGGCGAGGTATACTGTTCTGCCGAATGCAGGGTGGAGCACTTC
GAACGCGGTCACCGCTTGCTCTGCGTTGGGCCCGTGTCCGAGGAAGAGGC
ACCCACTCACCCCCTCTTTGCGTTTCGGGTTCACGCTACGCAGACAAACG
AGATCTTCCTCTTGGCGGGAGAGGTGATGGCGCAGATCGCATCGGCATTT
GTCATTGCTGCCTCAACAGGTGCAGACCCGAGGCCAGCTACTGTTAGCGA
ATCGGAGAGGGCTGGCGTAACTGCACAAGCGCCTTTTGCGGACTTTGTCC
AGGAGCCGTGGTGGGACGTTGCGGTGGCACGAGAAAAAACAGACAATGCC
TTGCAGCAATTGCAAAACGGAGCCGCCGCGGAAAACAATTTTCACAATCA
AGCAGCTGCTCTGTCTAGCGTCCTTCGGTCCCTCTGCGAAGAGTCGGCAT
CGCTGCTGCGAGACGCGCTGAGCCCTCTACCTCCCGAGCTGGAGGAAGTG
GTCACCACAGAGAGAATGGGCCGATTAATAGGAATGTTCGAGCAAAATAA
CGTTGGCATCCGGGTTTCTTCTCCCTTACCTTCGATGCTAAGGGACTTGC
TGGAGGGAGATCACGTTACTGGTAGCAACATTGTCGAAGAGGCGGCCTCC
CTGGTGATAATGTTGGATGCGGGATCGGACACAGATTCTAGTGGGTGTGA
CGACCAGGTTGAAGATGAAACGTGGACGTCTGATGACAGCCACGACCGCA
ATCCTGGATGTTGCGAGGTGAAATCCGGGGATAGAGCAGACAGCCCCGCT
TGCTCCAGGGGAGACAGCTTTACTGCGGCGGGCACCAGGGAAGAAGGATC
TTCAAGAAGAGTACATGATCCAGTAGAAATCCTGAAAGAAGCTGCGACCG
ATTACGGTGACCAGGTATTCACGCCCTTGGACGGAACCGCCTTGTACTCT
TTGGTTTGCTGCATGAACCACTCTTGTCGACCGAATTGTTTGGTTATTTA
CCCCCAGAGGCGTTCTAGTACAGGAGTCAAAAGGGCTGACCCCCTGGTTG
CACATGTTGTTTTGCTGGAGGATGTTCGGGCCGGCGAAGAGCTTACGCAG
AGCTATATTAACAAGGAGATGAGCCTGCAGCAGAGGAGGAACGCCCTAGA
GGACTACGGGTTCCTCTGTAGATGCCCGCGTTGTATGGAAGAAACGGGGA
TTTCCCAAGGGTCTGTTCTGTAAGTTCACGCTACGCAGACAAACGAGATC
TTCCTCTTGGCGGGAGAGGTGATGGCGCAGATCGCATCGGCATTTGTCAT
TGCTGCCTCAACAGGTGCAGACCCGAGGCCAGCTACTGTTAGCGAATCGG
AGAGGGCTGGCGTAACTGCACAAGCGCCTTTTGCGGACTTTGTCCAGGAG
CCGTGGTGGGACGTTGCGGTGGCACGAGAAAAAACAGACAATGCCTTGCA
GCAATTGCAAAACGGAGCCGCCGCGGAAAACAATTTTCACAATCAAGCAG
CTGCTCTGTCTAGCGTCCTTCGGTCCCTCTGCGAAGAGTCGGCATCGCTG
CTGCGAGACGCGCTGAGCCCTCTACCTCCCGAGCTGGAGGAAGTGGTCAC
CACAGAGAGAATGGGCCGATTAATAGGAATGTTCGAGCAAAATAACGTTG
GCATCCGGGTTTCTTCTCCCTTACCTTCGATGCTAAGGGACTTGCTGGAG
GGAGATCACGTTACTGGTAGCAACATTGTCGAAGAGGCGGCCTCCCTGGT
GATAATGTTGGATGCGGGATCGGACACAGATTCTAGTGGGTGTGACGACC
AGGTTGAAGATGAAACGTGGACGTCTGATGACAGCCACGACCGCAATCCT
GGATGTTGCGAGGTGAAATCCGGGGATAGAGCAGACAGCCCCGCTTGCTC
CAGGGGAGACAGCTTTACTGCGGCGGGCACCAGGGAAGAAGGATCTTCAA
GAAGAGTACATGATCCAGTAGAAATCCTGAAAGAAGCTGCGACCGATTAC
GGTGACCAGGTATTCACGCCCTTGGACGGAACCGCCTTGTACTCTTTGGT
TTGCTGCATGAACCACTCTTGTCGACCGAATTGTTTGGTTATTTACCCCC
AGAGGCGTTCTAGTACAGGAGTCAAAAGGGCTGACCCCCTGGTTGCACAT
GTTGTTTTGCTGGAGGATGTTCGGGCCGGCGAAGAGCTTACGCAGAGCTA
TATTAACAAGGAGATGAGCCTGCAGCAGAGGAGGAACGCCCTAGAGGACT
ACGGGTTCCTCTGTAGATGCCCGCGTTGTATGGAAGAAACGGGGATTTCC
CAAGGGTCTGTTCTGTAA
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