prot_H-elongata_contig12630.1960.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12630.1960.1
Unique Nameprot_H-elongata_contig12630.1960.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length235
Homology
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: D7FUS4_ECTSI (EF hand family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUS4_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 1.110e-91
Identity = 149/235 (63.40%), Postives = 186/235 (79.15%), Query Frame = 0
Query:    1 MLTSNVWMLKSAAAQVVFRVYLEDEQRLACVMAGGLAALVNMLHIKSQQIQSGTLAALLSLCEHPDVPGLLVEARDLSILAEHLRTTRDVVARRYMVLAIMKVALVCERPAVEPFLPDMLVSEHVLGVSDEVEAFVKAFVKKRKATDYLRVGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAMWDIKQAE 235
            ML S+ WML SAAAQVV  VY ED+QRL C  +GG+ +L++ +  K+ Q+Q+GTLAALLSLCEHPDVP ++  A  L +LAE+L T RD+  R Y+VLA+MKV LVCER AVEP+LPDMLVSEHVLG SDE++ FV+ FV KRKA+DYL VGV N+CRF   +I +YK TFK+ DKD  GALDEREL R+LKQLKV+  KK+V+N++ + V+KN SG+VEFDEFLD MWDIK A+
Sbjct:  424 MLKSDTWMLTSAAAQVVLHVYQEDDQRLRCAASGGVESLIDTIRTKAPQMQAGTLAALLSLCEHPDVPAVVAAAGGLEVLAEYLTTARDITTR-YVVLAVMKVILVCERLAVEPYLPDMLVSEHVLGASDEIDEFVRVFVDKRKASDYLPVGVANVCRFAAKDIAEYKSTFKELDKDASGALDERELGRLLKQLKVDSRKKTVKNVL-LAVDKNNSGMVEFDEFLDIMWDIKHAK 656          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A6H5J5F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5F4_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 1.180e-53
Identity = 109/235 (46.38%), Postives = 144/235 (61.28%), Query Frame = 0
Query:    1 MLTSNVWMLKSAAAQVVFRVYLEDEQRLACVMAGGLAALVNMLHIKSQQIQSGTLAALLSLCEHPDVPGLLVEARDLSILAEHLRTTRDVVARRYMVLAIMKVALVCERPAVEPFLPDMLVSEHVLGVSDEVEAFVKAFVKKRKATDYLRVGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAMWDIKQAE 235
            ML S+ WMLKSAAAQVV  VY ED+QRL C  +GG+ +L++ +  K+ Q+Q+GTLAALLSLCEHPDVP ++  A  L +LAE+L T RD                                SEHVLG SDE++ FV+AFV+KRKA+DYL VGV N+CRF   +I +YK TFK+ D            K+ +K + +   K + RN  + ++  + SG+VEFDEFLD MWDIK A+
Sbjct:  470 MLASDTWMLKSAAAQVVLHVYQEDDQRLRCAASGGVKSLIDTIRTKAPQMQAGTLAALLSLCEHPDVPAVVAAAGGLEVLAEYLTTARDTTT-----------------------------SEHVLGASDEIDEFVRAFVEKRKASDYLPVGVANVCRFAAKDIAEYKLTFKEVDSR----------KKTVKSVLLAVDKNNRRNKDSELLVDDRSGMVEFDEFLDIMWDIKHAK 665          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A485KTW7_9STRA (Aste57867_11777 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTW7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.600e-6
Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
Query:  151 VGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAMWDIK 232
            V  + L +FTP EI D K TFK+FD D  G++D+ EL R+L  +    + + +R +IA V + + SG +EF EFL  +++++
Sbjct:    5 VPSEYLQKFTPKEIQDIKRTFKQFDTDENGSIDDDELTRVLLAVGEQPSPELIRELIASV-DTDQSGTIEFPEFLTLLYELR 85          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: H9GSR3_ANOCA (Uncharacterized protein n=1 Tax=Anolis carolinensis TaxID=28377 RepID=H9GSR3_ANOCA)

HSP 1 Score: 55.5 bits (132), Expect = 3.760e-6
Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 0
Query:  158 RFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFL 225
            RFTP ++V+YKE F  FDKDG GA+   EL  +L+ L  N T+  ++ I+  V + N SG V+F+EFL
Sbjct:    4 RFTPEQLVEYKEAFSLFDKDGDGAVTTAELGIVLRSLGHNPTEVQLQAIVQDV-DANHSGKVDFNEFL 70          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A7S2N8K9_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N8K9_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 2.310e-5
Identity = 28/66 (42.42%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  160 TPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFL 225
            TP ++V+ +  FK+FDKDG G ++ +E++RI+K + V+     V+ +IA V + + SG VEFDEF+
Sbjct:   50 TPAQLVEIQTAFKRFDKDGDGHVEPKEIQRIMKDVGVDLPPSEVQKLIASV-DDDGSGTVEFDEFV 114          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: UPI0018D9ACC2 (calmodulin-1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9ACC2)

HSP 1 Score: 53.1 bits (126), Expect = 2.430e-5
Identity = 28/65 (43.08%), Postives = 43/65 (66.15%), Query Frame = 0
Query:  167 YKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAMWDI 231
            YKE F KFDK+G G + + EL+ +LK L  + T  +++ ++  V +KN SG +E+DEF+  M DI
Sbjct:   13 YKEKFNKFDKNGDGKMSKDELRGLLKSLNRSPTDANLKKVMGDV-DKNKSGFIEYDEFVQLMIDI 76          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A072VLW5_MEDTR (EF hand calcium-binding family protein n=23 Tax=50 kb inversion clade TaxID=2231393 RepID=A0A072VLW5_MEDTR)

HSP 1 Score: 52.8 bits (125), Expect = 3.520e-5
Identity = 27/66 (40.91%), Postives = 45/66 (68.18%), Query Frame = 0
Query:  163 EIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAM 228
            +IVD+KE F  FDKDG G +   EL  +++ L  N T++ ++++I+ V + + +G +EFDEFL+ M
Sbjct:    9 QIVDFKEAFSLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLNLM 73          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A836CPT7_9STRA (Calcium-dependent protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT7_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.640e-5
Identity = 31/87 (35.63%), Postives = 50/87 (57.47%), Query Frame = 0
Query:  142 KRKATDYLRVGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAM 228
            KR A  Y R G+         EI + +E F  FD DG G++D +ELK  ++ L      +++  +IA + +K++SG ++F+EFLD M
Sbjct:   14 KRAAKTYERPGLSE------EEIEEIREAFNLFDTDGSGSIDPKELKAAMQSLGFEAKNQTIYQMIADI-DKDSSGAIDFEEFLDMM 93          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: A0A7S3S4E4_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S4E4_9SPIT)

HSP 1 Score: 52.8 bits (125), Expect = 4.430e-5
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 0
Query:  142 KRKATDYLRVGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAM 228
            K  A  Y+R G+      T  EI + KE F  FD DG GA+D +EL+  ++ L      +++  +I  + +KN SG ++F+EFLD M
Sbjct:    6 KFSAGKYVRAGL------TEDEIEEIKEAFDLFDTDGSGAIDPKELRAAMQSLGFEAKNQTIYQMITDL-DKNKSGNIDFEEFLDMM 85          
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Match: V7BDI1_PHAVU (Uncharacterized protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7BDI1_PHAVU)

HSP 1 Score: 51.6 bits (122), Expect = 5.010e-5
Identity = 27/66 (40.91%), Postives = 44/66 (66.67%), Query Frame = 0
Query:  163 EIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTKKSVRNIIAVVVNKNTSGIVEFDEFLDAM 228
            +IVD+KE F  FDKDG G +   EL  +++ L  N T++ ++++I+ V + + +G +EFDEFL  M
Sbjct:   11 QIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEV-DADGNGTIEFDEFLSLM 75          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12630.1960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FUS4_ECTSI1.110e-9163.40EF hand family protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5J5F4_9PHAE1.180e-5346.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485KTW7_9STRA2.600e-639.02Aste57867_11777 protein n=1 Tax=Aphanomyces stella... [more]
H9GSR3_ANOCA3.760e-647.06Uncharacterized protein n=1 Tax=Anolis carolinensi... [more]
A0A7S2N8K9_9EUKA2.310e-542.42Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
UPI0018D9ACC22.430e-543.08calmodulin-1-like n=1 Tax=Patiria miniata TaxID=46... [more]
A0A072VLW5_MEDTR3.520e-540.91EF hand calcium-binding family protein n=23 Tax=50... [more]
A0A836CPT7_9STRA3.640e-535.63Calcium-dependent protein 4 n=1 Tax=Tribonema minu... [more]
A0A7S3S4E4_9SPIT4.430e-536.78Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
V7BDI1_PHAVU5.010e-540.91Uncharacterized protein n=1 Tax=Phaseolus vulgaris... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 166..194
e-value: 0.0029
score: 26.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 168..228
e-value: 1.4E-8
score: 35.0
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 213..234
score: 5.113
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 162..197
score: 13.007
IPR000225ArmadilloPFAMPF00514Armcoord: 24..62
e-value: 1.4E-4
score: 21.8
NoneNo IPR availableGENE3D1.10.238.10coord: 156..235
e-value: 2.6E-16
score: 61.7
NoneNo IPR availablePANTHERPTHR23050:SF233CALMODULIN-LIKE PROTEINcoord: 166..232
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 166..232
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..147
e-value: 2.0E-7
score: 32.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 2..108
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 158..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12630contigH-elongata_contig12630:3516..8198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12630.1960.1mRNA_H-elongata_contig12630.1960.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12630 3489..8198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12630.1960.1 ID=prot_H-elongata_contig12630.1960.1|Name=mRNA_H-elongata_contig12630.1960.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=235bp
MLTSNVWMLKSAAAQVVFRVYLEDEQRLACVMAGGLAALVNMLHIKSQQI
QSGTLAALLSLCEHPDVPGLLVEARDLSILAEHLRTTRDVVARRYMVLAI
MKVALVCERPAVEPFLPDMLVSEHVLGVSDEVEAFVKAFVKKRKATDYLR
VGVDNLCRFTPTEIVDYKETFKKFDKDGRGALDERELKRILKQLKVNCTK
KSVRNIIAVVVNKNTSGIVEFDEFLDAMWDIKQAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
IPR011992EF-hand-dom_pair