prot_H-elongata_contig102176.196.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig102176.196.1
Unique Nameprot_H-elongata_contig102176.196.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length66
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig102176.196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..61
e-value: 7.0E-8
score: 34.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..54
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..54
score: 13.606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig102176contigH-elongata_contig102176:580..777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig102176.196.1mRNA_H-elongata_contig102176.196.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig102176 580..777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig102176.196.1 ID=prot_H-elongata_contig102176.196.1|Name=mRNA_H-elongata_contig102176.196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
GTSKQAVPIFARALELYPGDTEINFNLGVTLQRLGMVQEAAGRFVATLDA
DPMVMPTTLGYIRVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom