Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 198 |
| Cds size | 198 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929560.8140638-CDS-H-elongata_contig102176:579..777 | 1622929560.8140638-CDS-H-elongata_contig102176:579..777 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102176 580..777 - |
| 1691679070.676658-CDS-H-elongata_contig102176:579..777 | 1691679070.676658-CDS-H-elongata_contig102176:579..777 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig102176 580..777 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig102176.196.1 >prot_H-elongata_contig102176.196.1 ID=prot_H-elongata_contig102176.196.1|Name=mRNA_H-elongata_contig102176.196.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=66bp
GTSKQAVPIFARALELYPGDTEINFNLGVTLQRLGMVQEAAGRFVATLDA
DPMVMPTTLGYIRVL* back to topmRNA from alignment at H-elongata_contig102176:580..777- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig102176.196.1 ID=mRNA_H-elongata_contig102176.196.1|Name=mRNA_H-elongata_contig102176.196.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=198bp|location=Sequence derived from alignment at H-elongata_contig102176:580..777- (Himanthalia elongata Himel1 dioecious)
GGCACTTCGAAGCAGGCCGTGCCGATCTTCGCTAGGGCTCTGGAACTCTA
CCCAGGAGATACGGAGATCAACTTCAATCTTGGGGTGACCCTCCAGAGAC
TCGGAATGGTCCAGGAGGCCGCAGGACGTTTCGTTGCTACCCTGGACGCT
GACCCCATGGTAATGCCAACAACCCTTGGTTATATAAGGGTTCTATAA back to topCoding sequence (CDS) from alignment at H-elongata_contig102176:580..777- >mRNA_H-elongata_contig102176.196.1 ID=mRNA_H-elongata_contig102176.196.1|Name=mRNA_H-elongata_contig102176.196.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=396bp|location=Sequence derived from alignment at H-elongata_contig102176:580..777- (Himanthalia elongata Himel1 dioecious)
GGCACTTCGAAGCAGGCCGTGCCGATCTTCGCTAGGGCTCTGGAACTCTA
CCCAGGAGATACGGAGATCAACTTCAATCTTGGGGTGACCCTCCAGAGAC
TCGGAATGGTCCAGGAGGCCGCAGGACGTTTCGTTGCTACCCTGGACGCT
GACCCCATGGTAATGCCAACAACCCTTGGTTATATAAGGGTTCTATAAGG
CACTTCGAAGCAGGCCGTGCCGATCTTCGCTAGGGCTCTGGAACTCTACC
CAGGAGATACGGAGATCAACTTCAATCTTGGGGTGACCCTCCAGAGACTC
GGAATGGTCCAGGAGGCCGCAGGACGTTTCGTTGCTACCCTGGACGCTGA
CCCCATGGTAATGCCAACAACCCTTGGTTATATAAGGGTTCTATAA back to top
|