prot_H-elongata_contig126190.1955.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig126190.1955.1
Unique Nameprot_H-elongata_contig126190.1955.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A225UU99_9STRA (Pol Polyprotein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UU99_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.410e-7
Identity = 31/121 (25.62%), Postives = 61/121 (50.41%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  DSG T HVSH           + G ++ +   N +P++G GR+E+++     T +++ + GV Y P++  +LLS   AV+  +    + R +  + + +  ++ +  +   D +Q QA
Sbjct:  205 WTIDSGCTRHVSHESQWFTDI--TTSGGSITVGGNNQIPIEGIGRVELEVSDSKGTMQKLILHGVLYAPQLQFSLLSVPAAVKH-DFRFSFDRKQCAMQTDQRYKIKALMANNTDLYQFQA 322          
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A2P4YPA7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YPA7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.320e-6
Identity = 31/121 (25.62%), Postives = 60/121 (49.59%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  DSG T HVSH           + G ++ +   N +P++G GR+E+ +       +++ + GV Y P++  +LLS   AV+  +  L + R +  + + +  ++ +  +   D +Q QA
Sbjct:  126 WTIDSGCTRHVSHEPQWFTDI--TTSGGSITVGGNNQIPIEGIGRVELQVSDSKGNMQKLTLHGVLYAPQLQFSLLSIPAAVKH-DFRLSFDRKQCTMQTDQRFKIKALMANNTDLYQFQA 243          
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A2P4XU07_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU07_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.450e-6
Identity = 30/121 (24.79%), Postives = 60/121 (49.59%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  D G T HV+H          A+ G ++ +   N +P++G GR+E+++     T + + + GV Y P++  +LLS   AV+  +    + R +  + + +  ++ +  +   D +Q QA
Sbjct:  153 WTIDPGCTRHVTHESQWFSDI--AASGGSITVGGNNQIPIEGIGRVELEVSDSKGTMQNLILHGVLYAPQLQFSLLSVPAAVKH-DFRFNFDRKQCAMQTDQRFKIKALMAGNTDLYQFQA 270          
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A0P1ACE6_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACE6_PLAHL)

HSP 1 Score: 53.9 bits (128), Expect = 6.100e-6
Identity = 31/121 (25.62%), Postives = 59/121 (48.76%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  DSG T HV+H          ++  +TV +   N +P++G G+IE+++     T + + +  V Y PE+  +LLS   AV+  +    + R +  + +    ++ +  +   D +Q QA
Sbjct:  229 WTIDSGCTRHVTHESQWFSTISASNGSITVGVK--NQIPIEGIGKIELEVTDSKGTQRMLTLHDVLYAPELKFSLLSVPAAVKH-DFRFSFDRKQCAVHTEPKFKINAMMATHADLYQFQA 346          
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A2P4XHP4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XHP4_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.160e-5
Identity = 30/121 (24.79%), Postives = 59/121 (48.76%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  DSG T HVSH           + G ++ +   N +P++G GR+E+ +       +++ + GV Y P++  +LLS   AV+  +    + R +  + + +  ++ +  +   D +Q QA
Sbjct:  273 WTIDSGYTRHVSHEPQWFTDI--TTSGGSITVGGNNQIPIEGIGRVELQVSDSKGNMQKLTLHGVLYAPQLQFSLLSIPAAVKH-DFRFSFDRKQCAMQTDQRFKIKALMANNTDLYQFQA 390          
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Match: A0A6A4DDX6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4DDX6_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.840e-5
Identity = 31/121 (25.62%), Postives = 59/121 (48.76%), Query Frame = 0
Query:    1 WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDLDQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGSRETSRLFSTSSPVRDYFQLQA 121
            W  DSG T HV+H          ++ G ++ +   N +P++G GR+E+++       K++ + GV Y P++  +LLS   AV+  +    + R K  + + E   + +  +     +Q QA
Sbjct:  138 WTIDSGCTRHVTHEAQWFSNI--SASGGSITVGGKNQIPIEGIGRVELEVIDYKGNMKKLILHGVLYAPQLHFSLLSLSAAVKH-DFRFSFDRKKCAMQTDERFSITALMATNTGLYQFQA 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig126190.1955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A225UU99_9STRA7.410e-725.62Pol Polyprotein (Fragment) n=1 Tax=Phytophthora me... [more]
A0A2P4YPA7_9STRA1.320e-625.62Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4XU07_9STRA5.450e-624.79Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A0P1ACE6_PLAHL6.100e-625.62Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A2P4XHP4_9STRA1.160e-524.79Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A4DDX6_9STRA1.840e-525.62Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig126190contigH-elongata_contig126190:1316..1681 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig126190.1955.1mRNA_H-elongata_contig126190.1955.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig126190 1316..1681 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig126190.1955.1 ID=prot_H-elongata_contig126190.1955.1|Name=mRNA_H-elongata_contig126190.1955.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
WESDSGATFHVSHTRAGMPAYKKASPGMTVEIADGNTLPVDGFGRIEMDL
DQPGHTTKRVKMDGVAYVPEISRNLLSTFKAVEQWEKPLIYYRDKAVLGS
RETSRLFSTSSPVRDYFQLQA*
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