prot_H-elongata_contig12611.1945.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: D8LDJ7_ECTSI (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ7_ECTSI) HSP 1 Score: 450 bits (1158), Expect = 8.250e-158 Identity = 232/272 (85.29%), Postives = 251/272 (92.28%), Query Frame = 0
Query: 1 MMSMGGGSGSMLVLNDPAAKISSSE--SAATATPVVNLSAFASRNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSFDGVLIVDDSSLIHDFYTGECSRPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
M S GGGSGSMLVLNDPAA++SS E +A +A PV NLSAFAS ND+VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTV+ANVVEITNSFAVPHLEKN+EVAVGKDFNKSMLALQQRVN RESVVGWYATSFDGVLIVDDSSLIHDFYTGEC RPVHLVVDTA+K+NIVGCK FIS PLEI G ALANVFH+VKV++VS EAERICIDRMVKGQE+ F PEGLAEV+S+MASLETSMQRL+ ML+QA+EYV TVVDGKLPADPHMGRK+
Sbjct: 1 MSSFGGGSGSMLVLNDPAAQLSSVEGKAATSAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQEEAFTTPEGLAEVDSRMASLETSMQRLVTMLQQAEEYVGTVVDGKLPADPHMGRKL 272
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A835YQU3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU3_9STRA) HSP 1 Score: 326 bits (835), Expect = 8.060e-109 Identity = 167/269 (62.08%), Postives = 206/269 (76.58%), Query Frame = 0
Query: 2 MSMGGGSGSMLVLNDPAAKISSSESAATATPVVNLSAFASRNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSFDGVLIVDDSSLIHDFYTGECSRPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
MS G G+ L+LNDPA ++S + A P L+ +AS ND+VVKVHP+VLFSVLDHYLRRPE Q RVIGTLLG V+ANVVE+TNSFAVPH EKN+EVAVGKDFNK MLAL VN +E +VGWYAT+FDG +VD+SSLIH+F+T EC PVH+VVDT++ + +GC+ +IS PLEI G ALANVFHQV+V + S+EAERICIDRMVKGQ P+G+A V+S+ SLE+SM RLL ML A +V VV G++P D +GRK+
Sbjct: 1 MSFSGADGA-LILNDPATQLSRTGDA----PAPTLTGYASTNDIVVKVHPVVLFSVLDHYLRRPEGQVRVIGTLLGKVNANVVEVTNSFAVPHQEKNDEVAVGKDFNKQMLALSGLVNGQERIVGWYATTFDGAQVVDNSSLIHEFFTTECESPVHIVVDTSLASDTIGCRAYISSPLEIAGEALANVFHQVQVQLESSEAERICIDRMVKGQAGGVLTPDGIASVDSEAVSLESSMTRLLAMLEAASAFVDKVVAGEVPGDAQVGRKI 264
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A7S2WB79_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB79_9STRA) HSP 1 Score: 273 bits (699), Expect = 8.360e-88 Identity = 129/225 (57.33%), Postives = 168/225 (74.67%), Query Frame = 0
Query: 46 VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSFDGVLIVDDSSLIHDFYTGECSRPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
+VKVHP VLFS+LDH++RR E Q RVIGTLLG V + VE+TN FAVPH +K +EVAVG+ FNK+M L QRVN +E +VGWYATS +GV +VD SSLIH FY EC+ PVHLVVDTAM+ + +G K ++S PL + G+ LAN+FHQ+KV + S+E ERICIDRM+KGQ+ PF E LAE+ ++ + SM+RLLGM+ A YV V+ G++ AD GR++
Sbjct: 67 LVKVHPAVLFSILDHFIRRQEGQVRVIGTLLGYVEESCVEVTNCFAVPHSDKQDEVAVGQAFNKTMYDLHQRVNPKEQIVGWYATSMEGVSVVDSSSLIHGFYAEECADPVHLVVDTAMRGDTLGVKAYVSTPLTVAGIELANMFHQIKVELFSSEPERICIDRMIKGQKSPFTSSESLAEITEELHGIGVSMERLLGMIEVASSYVDKVIAGEVQADEETGRRI 291
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A7S2DND3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND3_9STRA) HSP 1 Score: 271 bits (692), Expect = 3.060e-87 Identity = 131/229 (57.21%), Postives = 168/229 (73.36%), Query Frame = 0
Query: 40 ASRNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSFDGVLIVDDSSLIHDFYTGECSRPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGR 268
A + +VK+HP VLFS++DH++RRPE Q RVIGTLLG + VE+ N FAVPH EK +EVAVG+ FNK+M +L RVN++E +VGWYATS DG+ IVD SSLIHDFY EC+ P+H+VVDTA+ N VG K ++S PL+I GV AN+FHQV+V M S++AERIC+DRM+KGQ PF E L+ + ++ SLETSMQRLLGM+ +V VV G+ AD GR
Sbjct: 25 AEGSSRLVKIHPSVLFSIIDHFIRRPEGQTRVIGTLLGYSTDTHVELVNCFAVPHSEKQDEVAVGQTFNKNMCSLHTRVNTKEKIVGWYATSMDGMCIVDSSSLIHDFYANECADPIHIVVDTALIANTVGVKAYVSTPLQIAGVEFANMFHQVQVEMSSSDAERICMDRMLKGQAAPFQTSEALSALPHELTSLETSMQRLLGMIELVSNHVDKVVSGEREADNETGR 253
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: K0TIU7_THAOC (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIU7_THAOC) HSP 1 Score: 226 bits (577), Expect = 1.140e-69 Identity = 116/231 (50.22%), Postives = 155/231 (67.10%), Query Frame = 0
Query: 47 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSF------DGVLIVDDSSLIHDFYTGECSR-PVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
V VHP+VL SVLDH+ RR E RVIGTLLG + + VEITNSFAVPH E+ +EVA+GKDFN+ ML+L R N RE+VVGWYAT+ + I D SSLIH+FY GEC P+HLVVDTA+K + + + + S P+ I G LAN+FH++++++ S+EAERIC+DRM+ + P +G + +L SM++LL ML EYV VVDG +PAD +G +
Sbjct: 42 VNVHPLVLLSVLDHHTRRQEGAGRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDPIHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMIGATDSP----DGADPTQDEGEALRVSMEKLLAMLETCSEYVDKVVDGSVPADDALGMDI 268
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: B8LD20_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD20_THAPS) HSP 1 Score: 221 bits (563), Expect = 4.670e-68 Identity = 114/234 (48.72%), Postives = 153/234 (65.38%), Query Frame = 0
Query: 47 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSF---------DGVLIVDDSSLIHDFYTGECSR-PVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
V VHP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ +EVA+GKDFN+ MLAL R N RE+V+GWYAT+ + I D SSLIH+FY EC P+HLVVDT+++ + + + + S P+ + G LAN+FH++++A+ S+E+ERIC+DRM++ G P E A+L+ SM+RLL ML EYV VVDG + AD +GR +
Sbjct: 1 VLVHPIVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDPIHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSASSAEGAPASQDE----SAALQISMERLLAMLETCSEYVDKVVDGTISADDQVGRDI 230
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A7S3V657_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V657_9STRA) HSP 1 Score: 215 bits (547), Expect = 5.300e-65 Identity = 119/257 (46.30%), Postives = 159/257 (61.87%), Query Frame = 0
Query: 47 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSF---------------DGVLIVDDSSLIHDFYTGECS-----RPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVK----------GQEKP---FGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
V VHP+VL S+LDH+ RR ++ RVIGTLLG N VE+TN FAVPH E+ +EVA+GKDFN+ MLAL R N E+VVGWYAT+F + + D SSLIH+FY GEC PVHLVVDT++ ++ +G KGFIS + + G LAN+FH+V++ + S+E+ERI +D M++ G+EK G P G SL+ SM++LL ML A +YV VVDGKL AD +G ++
Sbjct: 29 VVVHPLVLLSILDHHTRRQDSAGRVIGTLLGRRDGNKVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRSETVVGWYATAFPSNGNDDNDDSNATTETRCLADTSSLIHEFYAGECEDTVMDSPVHLVVDTSLVEDTIGLKGFISSAVTLNGEPLANIFHEVRLLLKSSESERIVLDEMIRSLGGGAKKLEGEEKKDESVGEPSG--------GSLQVSMEKLLEMLETASDYVGQVVDGKLEADDAVGNQI 277
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A7S1ZLF8_9STRA (Eukaryotic translation initiation factor 3 subunit F n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF8_9STRA) HSP 1 Score: 213 bits (541), Expect = 6.290e-64 Identity = 115/259 (44.40%), Postives = 158/259 (61.00%), Query Frame = 0
Query: 47 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSF------------DGV--------------LIVDDSSLIHDFYTGECSR-PVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQE--------KPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
V VHP+VL SVLDH+ RR E RVIGTLLG + VEITN FAVPH E+ +EVA+GKDFN+ MLAL R N RESVVGWYAT+ DG I D SSLIH+FY GEC P+HLV+DT++ D+ + + + S P+++ G LAN+FH++++ M + E+IC+D+M+K + + VPE A S +A+L+ SM++L ML A YV +VVDG +P + +GR++
Sbjct: 36 VTVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRESVVGWYATALPEEDEGNEEETKDGGKGKKKMTSSPKSYRCIADTSSLIHEFYAGECDDDPIHLVIDTSLIDDSLALRAYRSTPVQVKGEPLANMFHEIRLGMTCSGTEKICVDKMIKSDDLLKRRNKSQEEEVPEDAASDESPVAALQISMEKLYSMLETATSYVDSVVDGSVPPNDVVGRQI 294
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A7R9W361_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W361_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.070e-63 Identity = 120/254 (47.24%), Postives = 156/254 (61.42%), Query Frame = 0
Query: 47 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANVVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSF----DGV-----------------LIVDDSSLIHDFYTGECSR-PVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQ--EKPFG------VPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
V VHP+VL SVLDH+ RR E RVIGTLLG + VE+TN FAVPH E+ +EVA+GKDFN+ MLAL R N +E+VVGWYAT+ DG I D SSLIH+FY GEC PVHLVVDT+++ + V + + S P+++ G LAN+FH++ +A+ +E+ERI +D+MVK Q EK G + A+L SM+RLL ML A YV VV+GK PAD +GRK+
Sbjct: 29 VVVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDRVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRKETVVGWYATALPVDSDGGEGEEGADSSGSGGGEYRCIADTSSLIHEFYAGECDDDPVHLVVDTSLRTDAVSLRAYRSTPVQVRGEPLANLFHEIGLAVRCSESERIAVDQMVKAQNREKADGGEXXXXXXXXXXXXEDEAAALRVSMERLLSMLETASAYVDGVVEGKTPADDKVGRKI 282
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Match: A0A067D1T1_SAPPC (Eukaryotic translation initiation factor 3 subunit F n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D1T1_SAPPC) HSP 1 Score: 208 bits (530), Expect = 4.140e-63 Identity = 114/227 (50.22%), Postives = 151/227 (66.52%), Query Frame = 0
Query: 46 VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSAN--VVEITNSFAVPHLEKNNEVAVGKDFNKSMLALQQRVNSRESVVGWYATSFDGVLIVDDSSLIHDFYTGECSRPVHLVVDTAMKDNIVGCKGFISMPLEIGGVALANVFHQVKVAMVSTEAERICIDRMVKGQEKPFGVPEGLAEVNSKMASLETSMQRLLGMLRQAQEYVTTVVDGKLPADPHMGRKV 270
+V +HP+V+F +LD +LRR E+QKRVIGTLLG V A VV I+NSF VPHLEK +EVAVGKD+++ ML L QRVN E VVGWYATS I ++S LIH+FY+ EC+ PVH+VVDT+++ + + GFIS L + VALAN F QVKV + EAE I +D M K G A + S + +LE ++ RL +L + YV VV GK A+P +GR++
Sbjct: 12 LVHIHPVVVFQILDRFLRRSEDQKRVIGTLLGVVDAEHGVVTISNSFPVPHLEKGDEVAVGKDYHRQMLLLHQRVNPNEVVVGWYATSTTAEAINENSCLIHEFYSSECASPVHVVVDTSLESDNLNIMGFISSALSVADVALANQFKQVKVETKTYEAESIALDVMAKRSS-------GSASLPSDLEALEQAIVRLHELLATSAAYVGDVVAGKQAANPKLGREL 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12611.1945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig12611.1945.1 ID=prot_H-elongata_contig12611.1945.1|Name=mRNA_H-elongata_contig12611.1945.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bpback to top |