prot_H-elongata_contig1261.1944.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1261.1944.1
Unique Nameprot_H-elongata_contig1261.1944.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length270
Homology
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 5.090e-96
Identity = 149/268 (55.60%), Postives = 186/268 (69.40%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYLIGK-GCCVSEIEHPPTLRRVLKACLLGSAQGEDQDASE-----TPRDVLG--GGVSXXXXXXXXIHDAVVVPVDDDSDLCIVCFDNERDCTLVPCGHHCSCLTCAARFNECPICRAAVVQKIKTISV 269
            CRNCWR+VC  CV  FW R+MVP +Y  +    RMR+C++C++AMEAFR ALLLG+ +DA +AYSTGCVNL+ PY ++HGE P+HCAAAGG V LL+WL++ LGC +  D  KK P++D R LTVLGAAAVNG++ AMRYL+ + GC VSEI+H PTL+  L ACL GSA+  D + S         D LG  GGV         +  A      D+   CIVCFDNE DCTLVPCGHHC C+TCA++F+ CP+CR  V  KIKTI V
Sbjct:  526 CRNCWRVVCDDCVGTFWARNMVPPRYASERDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCPIFTDSDKKVPIKDLRSLTVLGAAAVNGQVQAMRYLVNQQGCSVSEIKHLPTLKIALDACLHGSAKTRDAERSRYRANGNDPDPLGSAGGVCFGSRSTASLTTAAAEVETDNC--CIVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTIPV 791          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.850e-77
Identity = 136/280 (48.57%), Postives = 171/280 (61.07%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYL-IGKGCCVSEIEHPPTLRRVLKACLLGSAQGEDQDASETPRDVLGGGVSXXXXXXXXIHDA-------------------VVVPVDDDSDLCIVCFDNERDCTLVPCGHHCSCLTCAARFNECPICRAAVVQKIKTISV 269
            CRNC RLVC  C E FWPR M+P  Y +D S  ++R+C +C+ A E FRKA L G  + A AA+STGCVNL  PY IYH E P+HCAA+GG + +LAWL+D   C L  D++KK  L D R+L+V+GAAA +G +  MRYL   +GC V+EI    +L R L+ CL   A    +      R     G   XXXXXXX                       V  P+ DD ++CIVCF+ + DCTLVPCGHHC CLTCAA+F +CP+CRA V QKI+ ISV
Sbjct:  399 CRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKKIALGDSRRLSVMGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVPETGGHRSRISNNSGTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEVAAPLGDDDNMCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 678          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 8.060e-58
Identity = 95/171 (55.56%), Postives = 120/171 (70.18%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYLIGKGCC-VSEIEHPPTLRRVLKACLLGSAQ 179
            CRNCWR+VC  C+  FW R+MVP +Y  +    RMR+C++C++AMEAFR ALLLG+ +DA +AYSTGCVNL+ PY ++HGE P+HCAAAGG V LL+WL++ LGC +  D  KK P+RD R LTVLGAAAVN                V EI+H PTL+  L ACL GSA+
Sbjct:  524 CRNCWRVVCDDCIGTFWARNMVPPRYASEGDGFRMRVCKTCNAAMEAFRTALLLGRAEDAMSAYSTGCVNLDRPYTVFHGELPVHCAAAGGNVGLLSWLVEELGCSIFTDSDKKVPIRDLRSLTVLGAAAVNXXXXXXXXXXXXXXXXVLEIKHLPTLKIALDACLHGSAK 694          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: A0A7S3YF48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF48_HETAK)

HSP 1 Score: 170 bits (431), Expect = 4.530e-47
Identity = 102/290 (35.17%), Postives = 139/290 (47.93%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLT-VLGAAAVNGRIPAMRYLIGKGCCVSEI---EH-----------------PPTLRRVLKACLLGSAQGEDQDASETPRDVLGGGVSXXXXXXXXIHDAVVVPVDD---------DSDLCIVCFDNERDCTLVPCGHHCSCLTCAARFNECPICRAAVVQKIKTISV 269
            CRNC R+VC  C  A WP  M+PA Y       + R+CR C  AME FR AL  G     +AAY+TG VNL TPY ++ GE P+HCAAAGG + LLAWL+D  G  +   Q K+ PL     +T  +  AAVNG +  MR+L    C V +I   EH                  P     + A L+ +A+    +  ++      G           I  +  +             + + C++CF+N  +  +VPCGH   C  C+ +F ECP+CR  V Q IKT  V
Sbjct:   98 CRNCGRVVCRECARAHWPPRMLPATYLDGAGEKKARVCRGCQWAMEDFRAALRRGDAPGVRAAYATGVVNLRTPYTVHGGEYPVHCAAAGGSLPLLAWLVDERGAFVRDPQSKQRPLFASDGITSCMSLAAVNGNLEMMRWLTQHECSVRDIVNLEHFYAATEKLLALPSTGTAGPLNSEPVAAALVDNARPPPFNPQQSVVVASVGSTPISAPSFESITPSAGIEQQGVTAVSGAGMEENECVICFENNINTVIVPCGHTAVCDGCSGKFTECPVCREPVQQVIKTFGV 387          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 5.250e-40
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKK 123
            CRNC RLVC  C E FWPR M+P  Y +D S  ++R+C SC+ A E FRKA L G  + A AA+STGCVNL  PY IYH E P+HCAA+GG + +LAWL+D   C L  D++KK
Sbjct:   75 CRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPLFLDREKK 188          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.570e-35
Identity = 75/172 (43.60%), Postives = 95/172 (55.23%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYLIGKGCC-VSEI-EHPPTLRRVLKACLLGSAQ 179
            CRNC R VC  C +  WP  M+P  Y+  +   + RIC +C    EAFR ALL G    A+AAY  GCVNL  PY IY    P+HCAA GG + LLAWL++   C L  D  +   L + R+ +V+  AA NG    MRYL+ K    V+EI +H    R + KA    SAQ
Sbjct:   54 CRNCGRAVCDACAKTSWPSSMLPFTYSAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPLFKDLSRTIALGNGRKESVMAVAAQNGHTHIMRYLLHKHSVKVNEITDHKALWRALDKALRESSAQ 225          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.790e-33
Identity = 74/176 (42.05%), Postives = 99/176 (56.25%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYL-IGKGCCVSEIEHPPTLRRVLKACLLGSAQGEDQD 184
            CRNC RLVC  C   FWP+ M+P  Y    +  R+R+CR+C+S  ++FR+ALL G  + A  AY TGCVNL  P+     E P+HCAAAGG V L+ WL++   C +  D +K  P  D    +V+ AAA +GR+  MRYL   +    S +   P  R  L+ACL       D D
Sbjct:  609 CRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLSFTQPSAASGMGMAPFWRG-LQACLRNDEDKHDDD 781          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 3.210e-33
Identity = 72/175 (41.14%), Postives = 96/175 (54.86%), Query Frame = 0
Query:   10 CRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYLIGKGCCVSEIEHPPTLRRVLKACLLGSAQGEDQD 184
            CRNC RLVC  C   FWP+ M+P  Y    +  R+R+CR+C+S  +AFR+ALL G  + A  A+ TGCVNL  P+     E P+HCAAAGG V L+ WL++   C +  D +K  P  D    +V+ AAA +GR+  MRYL       +         R L+ACL       D D
Sbjct:  539 CRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQPSAASGMGMAPFWRGLQACLRNDEDKHDDD 711          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.510e-23
Identity = 70/162 (43.21%), Postives = 88/162 (54.32%), Query Frame = 0
Query:  135 LGAAAVNGRIPAMRYL-IGKGCCVSEIEHPPTLRRVLKACLL---------GSAQGEDQDASETPRDVLGGGVSXXXXXXXXIHDA-----------------VVVPVDDDSDLCIVCFDNERDCTLVPCGHHCSCLTCAARFNECPICRAAVVQKIKTISV 269
            +GAAA +G +  MRYL   +GC V+EI    +L R L+ CL          G  +    ++S TP         XXXXXXXX                     V  P+ DD + CIVCF+ + DCTLVPCGHHC CLTCAA+F +CP+CRA V QKI+ ISV
Sbjct:    1 MGAAAASGHVQIMRYLAFTQGCKVTEIRDMGSLWRALEKCLYDGANVVPETGGHRSRISNSSGTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAATGGAEVSAPLGDDDNTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAISV 162          
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Match: K8Z0F4_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0F4_NANGC)

HSP 1 Score: 96.7 bits (239), Expect = 1.700e-21
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 0
Query:   11 RNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSCHSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYH-GERPIHCAAAGGKVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAA 139
            RNC +LVC  C ++ WPR M+P+ Y  +ES++R  +C +C+     FR+AL  G    A   +++G +N+  P++I    E P+HCAA GG ++LL WL++ LGC L       +PL   R  +VLG A+
Sbjct:    1 RNCGQLVCPKCSKSRWPRGMLPSTYHNNESTVR--VCDACNHLAWNFRRALKEGDRIRALELFASGNLNIWMPFIIESVREYPVHCAAEGGNLDLLRWLVNELGCPLYETADGASPLLTHRGDSVLGVAS 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1261.1944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KTY3_9PHAE5.090e-9655.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTC5_9PHAE2.850e-7748.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF5_ECTSI8.060e-5855.56FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S3YF48_HETAK4.530e-4735.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LDM9_ECTSI5.250e-4056.14FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A836CC14_9STRA3.570e-3543.60FYVE-type domain-containing protein n=1 Tax=Tribon... [more]
A0A6H5KUU5_9PHAE1.790e-3342.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF4_ECTSI3.210e-3341.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDN0_ECTSI2.510e-2343.21Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
K8Z0F4_NANGC1.700e-2139.23Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 214..267
e-value: 7.5E-14
score: 52.9
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 219..260
e-value: 1.1E-11
score: 44.4
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 217..265
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 216..263
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 50..186
e-value: 1.8E-7
score: 32.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 79..157
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 88..162
score: 8.959
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 222..257
score: 11.265
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 9..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1261contigH-elongata_contig1261:8214..15065 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1261.1944.1mRNA_H-elongata_contig1261.1944.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1261 7309..16496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1261.1944.1 ID=prot_H-elongata_contig1261.1944.1|Name=mRNA_H-elongata_contig1261.1944.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
MPDCGNPLRCRNCWRLVCGGCVEAFWPRDMVPAKYTIDESSIRMRICRSC
HSAMEAFRKALLLGQVKDAKAAYSTGCVNLETPYVIYHGERPIHCAAAGG
KVELLAWLIDYLGCRLLADQKKKTPLRDQRQLTVLGAAAVNGRIPAMRYL
IGKGCCVSEIEHPPTLRRVLKACLLGSAQGEDQDASETPRDVLGGGVSGG
GVSGGGIHDAVVVPVDDDSDLCIVCFDNERDCTLVPCGHHCSCLTCAARF
NECPICRAAVVQKIKTISV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR001841Znf_RING
IPR011011Znf_FYVE_PHD