mRNA_H-elongata_contig12602.1938.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A6H5KHT1_9PHAE (Squalene monooxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHT1_9PHAE) HSP 1 Score: 909 bits (2348), Expect = 0.000e+0 Identity = 471/643 (73.25%), Postives = 524/643 (81.49%), Query Frame = 1
Query: 1 RLYVVNYIAVVVFAVSMYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTG-----AMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDAD----------IKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAK-EGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWENN 1881
RLYVVNY+AV VFA SMYRIVR+W+G+LN ++ FPLA+P G AS+TYLFGFFG+S+IS VMDPPF SPAPS K SA G + + GSS YSL++PEV+IVGAGTAGASAA T RQGRKVLLVE+CM EQDRIVGELLQPGGLRALERLGLD CAKEG DSV+V+GYAII++A E + D V+LYYP DP+N++E FGKGV P A A + VPRGRSFHN RFVQR+RE A AEPNVRVVE TVS LL+G GGEVVGVRYREA K EG+E + RVTREV APLT+VADGIWSGLRKCAN NRPQ LSTFVGVLV H +AAPVPHK+CGHVVLAHPSP LIYQISSTETRVLVDVAG+MPSAA+GGL LRE+SAPQLP F+PAFLEAVARGDVKSMPNRA+ +S+VHR G LL+GDALNMRHPLTGGGMTVA+KDVELL +LL GV D AA+A ++RFH R AHA+TINILANALY VFSTPE P+SK TRVDLQ ACFDYLSLGGCYSAGPVGLLSGLSP PW LTTHFFMVAFHGCR HLLP+PTP G LRVYRLLHVATKIIMPLLEQEGSTFL+WWP +KA+QL+LPWEHERWEN
Sbjct: 147 RLYVVNYVAVAVFAASMYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISVISGVMDPPFVSSPAPSSKDRSAAPAAGLPKRFSPTEEGSSDYSLDNPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAETGGAAAEAEG-RLDSVMLYYPESDPENRSELFGKGVKPAAAAAAAKGGEAGRRPCSREGGVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAVKGEGQE----EERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPLRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEGPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPAPWALTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEQEGSTFLAWWPFRKAIQLVLPWEHERWENQ 784
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: D7G804_ECTSI (Squalene monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G804_ECTSI) HSP 1 Score: 896 bits (2315), Expect = 0.000e+0 Identity = 463/625 (74.08%), Postives = 514/625 (82.24%), Query Frame = 1
Query: 49 MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTG-----AMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDAD---------IKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAK-EGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWEN 1878
MYRIVR+W+G+LN ++ FPLA+P G AS+TYLFGFFG+SIIS VMDPPF SPAPSPK SA G + + G S Y L+ PEV+IVGAGTAGASAA T RQGRKVLLVE+CM EQDRIVGELLQPGGLRALERLGLD CAKEG DSV+V+GYAII++A A RD V+LYYP DP+N++E FGKGV P A A + +VPRGRSFHN RFVQR+RE A AEPNVRVVE TVS LL+G GGEVVGVRYREAAK EG+E + RVTREV APLT+VADGIWSGLRKCAN NRPQ LSTFVGVLV H +AAPVPHK+CGHVVLAHPSP LIYQISSTETRVLVDVAG+MPSAA+GGL LRE+SAPQLP F+PAFLEAVARGDVKSMPNRA+ +S+VHR G LL+GDALNMRHPLTGGGMTVA+KDVELL +LL GV F D AA+A ++RFH R AHA+TINILANALY VFSTPEDP+SK TRVDLQ ACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCR HLLP+PTP G LRVYRLLHVATKIIMPLLE+EGSTFL+WWP +KA+QL+LPWEHERWEN
Sbjct: 1 MYRIVRLWDGSLNRMHFFPLAVPFIGVFASMTYLFGFFGISIISGVMDPPFLSSPAPSPKDRSAAPAAGPAKHFSPTEEGPSDYGLDKPEVIIVGAGTAGASAAATFARQGRKVLLVERCMSEQDRIVGELLQPGGLRALERLGLDACAKEGTDSVVVDGYAIIRSAEAG-GAAAAPGGRRDSVMLYYPESDPENRSELFGKGVKPAAAATAKGGEAGRRPCSREGEVPRGRSFHNCRFVQRLREAAQAEPNVRVVEGTVSALLEGDGGEVVGVRYREAAKGEGQE---EEERVTREVRAPLTVVADGIWSGLRKCANTNRPQKLSTFVGVLVKHAADAAPVPHKHCGHVVLAHPSPILIYQISSTETRVLVDVAGAMPSAADGGLSAHLREKSAPQLPAMFRPAFLEAVARGDVKSMPNRAMPASSVHRPGALLLGDALNMRHPLTGGGMTVALKDVELLSELLRGVPFRDAAAVASAAARFHAGRRAHAATINILANALYHVFSTPEDPASKGTRVDLQAACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCREHLLPVPTPGGVLRVYRLLHVATKIIMPLLEEEGSTFLAWWPFRKAIQLVLPWEHERWEN 621
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A836CDI9_9STRA (Squalene monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDI9_9STRA) HSP 1 Score: 621 bits (1602), Expect = 3.930e-209 Identity = 359/634 (56.62%), Postives = 432/634 (68.14%), Query Frame = 1
Query: 49 MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVM------DPPFAQSPAPSPK---------AASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVVGVRYREAAKEGEEGAG-AQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARG-DVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTP----EDPSSKDT--RVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMP--TPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEHERWE 1875
MY ++ W G LN +N F LALP G AS+TY FGFFG+S +++V+ +P S P+ AA A+ P + + S+ Y+LE PEVV++GAGTAGAS A+ QGR+V L+EK QDRIVGEL+QPGG+RALE LGL CA E DSV V+GY +I + D E +L+YP DP + + FG GVT + A A PRGRSFHN FV R+REVA AEPNVR+VE TV+ L++ +GG VVGVRY+ + G EG G AR E+ APLT+VADGIWSGLR CAN ++P +S+FVGV+VTH P A+PVPH++CGHVVLA PSP LIYQIS TETRVLVDVAG MPSAA G L FL E+ A LP F+ A+LEAVA G +KSMPNRAL+SS + G +LIGDALNMRHPLTGGGMTVA+KDV LL LL G D AA+A S+ FHR+R HA+TIN+LANALY VF+TP +D + D R LQ ACFDYLSLGG Y+AGP+GLLSGL+P P VL HFFMVA HGCR HLLP+ P + VYRLL VA IIMPLLE E ST LSW PV+KA+QLL PWEH RW+
Sbjct: 1 MYSFLKEWEGALNRMNVFKLALPGLGVFASMTYFFGFFGISFVNSVLGTDNQAEPCELDSDKPNNSSGSNVDEATAAVASGPYARSAPASSAKYTLEQPEVVVIGAGTAGASLAIAFAWQGRRVTLIEKSFVLQDRIVGELMQPGGMRALETLGLAACATERCDSVRVDGYTVILPPG--VSAARPDGAE---AVLHYPDSDPDSLLQQFGAGVTLEQAAAAGGA--GAPRGRSFHNCNFVARLREVARAEPNVRMVEGTVTQLVE-EGGAVVGVRYK--VRSGGEGGGYVCARPVHELRAPLTIVADGIWSGLRACANPHKPLLISSFVGVIVTHPPMASPVPHRHCGHVVLAQPSPILIYQISPTETRVLVDVAGKMPSAATGALSAFLVEQ-ARWLPPVFRAAYLEAVAAGGSIKSMPNRALASSAKLKPGAILIGDALNMRHPLTGGGMTVALKDVALLATLLGGADLADRAAVARASAAFHRRRRGHAATINVLANALYAVFTTPVCSDDDGNGGDVTARSHLQDACFDYLSLGGAYAAGPIGLLSGLTPRPGVLAAHFFMVAAHGCRAHLLPLGFLNPRRWRHVYRLLSVACGIIMPLLEVERSTPLSWLPVRKAVQLLFPWEHLRWD 623
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A4D9D9N2_9STRA (Squalene monooxygenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9N2_9STRA) HSP 1 Score: 486 bits (1251), Expect = 6.330e-156 Identity = 285/595 (47.90%), Postives = 358/595 (60.17%), Query Frame = 1
Query: 304 VVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFG------------------------------------KGVTPKGAVDADIKRDDVP-----------------------------RGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKG----GEVVGVRY------REAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNN-RPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLE-GVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
++I+GAGTAGA+AAV L +G KVLL E+ M QDRIVGELLQPGG+RALERLGLDECAKEGIDSV V+GY + + ++ ++ +LL YP+ DP E FG + VTP + P +GRSFHN RFVQR+R ALAEPNV VV VS LL + V+GV Y R +GEE + + R +APLTLVADG+WS LR + +P LS+FVG++++H P A+P+PH +CGHVVLA PSP L+YQISSTETRVLVD+ G MPSA+ G L +L PQLP Q F AVARG+ KSMPNR++ ++NV R G L++GDALNMRHPLTGGGMTVA++DVE LC LLE D AAM + RF R+R A A+TIN+LANAL+ VFSTP + TR DL+ ACFDYLS+GG + GP+ LLSGL+P P +L HFF+VAFHG R +L P+P+ G R Y +L VA +IIMPLL E ST L+ WPV+ + L+ P+
Sbjct: 94 IIIIGAGTAGAAAAVGLAERGFKVLLFERDMSLQDRIVGELLQPGGVRALERLGLDECAKEGIDSVHVDGYVVFTPP----QHKKEGGEKVQSILLKYPAYDPATLKELFGVIDPSPSSPAADRPTLSLSPPRFSEKEGGKLVHGAGRAVTPPFPEGTKVTHAPNPPSSPSGHLSMPPSPSFPSAAHQGPTSLHPQGRSFHNGRFVQRLRARALAEPNVTVVNGIVSRLLYAEPDSPTSRVIGVEYKIGTGRRLRTADGEE---VEEKEVRRAMAPLTLVADGLWSSLRTHVDKAAKPTQLSSFVGLILSHPPMASPLPHPHCGHVVLADPSPVLLYQISSTETRVLVDIFGRMPSASTGDLAHYLSTHIQPQLPPVLQAPFAAAVARGEFKSMPNRSMPAANVDRDGVLMVGDALNMRHPLTGGGMTVALRDVEALCYLLETSTDLGDPAAMRVLKGRFARERKAWAATINVLANALHAVFSTP---AGNPTRKDLRDACFDYLSVGGYCAGGPINLLSGLTPRPSILALHFFLVAFHGVRKYLWPVPSWGGLGRTYEMLQVACEIIMPLLSVEKSTVLAAWPVRALVGLIFPY 678
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A6G0XPP6_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPP6_9STRA) HSP 1 Score: 436 bits (1120), Expect = 2.980e-137 Identity = 246/529 (46.50%), Postives = 323/529 (61.06%), Query Frame = 1
Query: 289 LEDP--EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKG---KGGEVVGVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSS-KDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
+E+P +V+IVGAGT G S A+ L +QG+KV +VEK M QDR VGEL+QPGGL+AL +LGL ECA+ D V+ GY +I DE+D ++L YP P+N EF G G GR FHN FVQR+RE + EPNV +VE TV+ LL K G++YR A + APL +V+DG+WSGLR+ + + P+ +S+FV VL+TH A VP + GHV+LA PSP L+YQIS TETRVLVDV G +PS+++G L + L APQ+PK + AF+EAV G VK+MPNR ++ +++GD NMRHPLTGGGMTVA+KDV LL +LL V +A +A V F R+R H+ST+NILANALY VFS P D S RV L+ +C++YL +GG + AGP+GLL L+P P +L HFFMVA + L P PTP+ L YR+ H A IIMPLLE+E T L+W P+ + L+ P+
Sbjct: 125 IENPAADVIIVGAGTTGCSMAIALAKQGKKVFIVEKTMEYQDRFVGELMQPGGLQALRKLGLIECAETETD-VLTKGYTVIL-------------DEKDNIMLPYPDRVPQNFWEFLGVFRNDNGT--------GKQYGRCFHNGGFVQRLRERLMKEPNVTIVEGTVTKLLMADDAKANVCTGIQYRRRAPTEDV-----EMPVESATAPLVIVSDGLWSGLRRDLSKDSPKQISSFVAVLMTHPKMEATVPCRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSSSGALTEHLISYVAPQIPKESRAAFIEAVKTGPVKTMPNREFMTTQPSIGRVIMLGDTFNMRHPLTGGGMTVALKDVVLLSELLRDVDVTKSADIAAVRRTFERERVHHSSTVNILANALYHVFSVPLDGSDVAAARVTLRESCYEYLKMGGMFMAGPLGLLCALTPKPMILALHFFMVAGYAASRCLRPFPTPARLLHCYRVFHQACIIIMPLLERENVTVLAWAPLCALVNLIFPY 626
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A1V9ZRK4_9STRA (Squalene monooxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRK4_9STRA) HSP 1 Score: 417 bits (1072), Expect = 2.980e-130 Identity = 247/588 (42.01%), Postives = 337/588 (57.31%), Query Frame = 1
Query: 103 PLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAP---SPKAASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLP 1854
PL+ A + +L YL GF G+ +A PAP + K A N D +V+I+G GT G + A+ L +QG+KVL+ EK + QDR VGEL+QPGGL AL L L +CA+ D + +GY I+ K ++ S+ D V+L YP PK E+ G P G GR FHN +FV R+R A NV +E TV+ L+ ++ GV+YR A + + APL +V DG+WSGLR+ + ++P+ +S+F+ +L+ H A VP + GHV+LA PSP ++YQIS TETRVLVDV G +PS +NG L K L E APQ+P++ AF++AV G VKSMPNR ++ ++IGD+ NMRHPLTGGGM+VA++D LL LL V F D A+A+ F R H+STINILANALY VF+ P+ S+ R DL+ +C+ YL LGG +S+GP+GLL L+P P+VL THFFMVA + L P+PTP L YR+ H A IIMPLLE+E T L+W P+ + ++ P
Sbjct: 83 PLSFEQAAGVVALVYLLGFVGM----------WAVKPAPKYTNDKYAEPNP----------------DADVIIIGGGTTGCAMAMGLAKQGKKVLVFEKTLEYQDRFVGELMQPGGLDALRSLDLLDCAETETD-IKADGYYIL--------KTKKGSE--DHVVLPYPERIPKTFLEYLGYSRAPNGTAKQ--------YGRGFHNGKFVDRLRAKVFAHENVTCIEGTVTKLISDTKTDICRGVQYRRKAPAEDVD-----MPVEQAKAPLVIVCDGLWSGLRRELSTDQPKQISSFIAILMKHPAMEASVPFRGYGHVILAEPSPIVVYQISPTETRVLVDVPGKVPSQSNGDLTKHLLEVVAPQMPEASHAAFIQAVNEGPVKSMPNREFMTTQPSLGRCIMIGDSWNMRHPLTGGGMSVALRDAVLLSDLLGKVDFVDADAIAQARHTFEETRVNHSSTINILANALYHVFAIPDGYSNVAAREDLRESCYQYLKLGGMFSSGPLGLLCALTPKPFVLATHFFMVAGYAASRVLGPVPTPGRLLHCYRVFHEACMIIMPLLERENVTILAWTPLACLINVIFP 620
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A485KQF9_9STRA (Squalene monooxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQF9_9STRA) HSP 1 Score: 417 bits (1072), Expect = 3.460e-130 Identity = 238/525 (45.33%), Postives = 317/525 (60.38%), Query Frame = 1
Query: 301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKD-----TRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
+V+I+G GTAGAS AV L +QGRKVL+ EK + QDR VGEL+QPGGL+AL LGL +CA+ D ++ +GY ++ + D + L YP P+ E+ G G GR FHN FVQR+R LAEPNV V+E TVS LL+ V GV YR A + T + APL +V+DG+WSGLR +N++P+ +S+FV VL+TH A VP + GHV+LA PSP L+YQIS TETRVLVDV G +PS ++G L L APQ+P + + AF+EAV G VKSMPNR ++ +++GD+ NMRHPLTGGGMTVA+KDV LL LL+ A +A V F +R H+ST+NILANALY +FS P D D R L+ +CF+YL +GG +SAGP+GLL L+P P++L HFFMVA + L P P+PS + +++ H A +IIMPLLE+E T L+W P+ + L+ P+
Sbjct: 130 DVIIIGGGTAGASMAVGLAKQGRKVLVFEKTLEYQDRFVGELMQPGGLQALRTLGLLDCAETEND-IMTHGYYVLT--------------KDDHIHLPYPDRVPQTFLEYLGVSRADNGT--------GKQYGRGFHNGAFVQRLRARLLAEPNVTVIEGTVSKLLQADKANVCQGVVYRRKAPSDDVD-----MPTEQATAPLVIVSDGLWSGLRGALSNDKPKLISSFVAVLMTHPKMEATVPFRQHGHVILAEPSPILMYQISQTETRVLVDVPGKVPSQSSGALEAHLLTHVAPQIPDASRAAFIEAVKTGPVKSMPNREFMTTQPTMGRVIMLGDSFNMRHPLTGGGMTVALKDVVLLNDLLKDADLTRAADVAAVRRAFELERIHHSSTVNILANALYFIFSVPADDDGSDPRRALVRETLRESCFEYLKMGGMFSAGPLGLLCALTPKPFILALHFFMVAGYAGWRCLKPFPSPSRLVLCFQVFHEACRIIMPLLERENVTILAWPPLCALINLIFPY 626
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: W4HAJ6_9STRA (Squalene monooxygenase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAJ6_9STRA) HSP 1 Score: 416 bits (1069), Expect = 1.040e-129 Identity = 238/529 (44.99%), Postives = 314/529 (59.36%), Query Frame = 1
Query: 301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLL-----KGKGGEVVGVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRA-LSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTP----EDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
+V+IVGAGTAG S AV L +QGRKVL++EK + QDR VGEL+QPGGL AL L L ECA+ D V GY+I+ + D ++L YP P E+ G G GR FHN FVQR+R LAEPNV VVE TVS LL K G+++R A + APL + +DG+WSGLR+ + + P+ +S+FV +L+TH A VP +N GHV+LAHPSP L+YQIS TETRVLVDV G +PS++NG L K L APQ+P + + AF+ AV G VKSMPNR +++ H +++GD NMRHPLTGGGM+VA+KDV LL LL+ V +A V F + R H+ST+NILANALY +FS P +D R L+ +C++YL +GG + AGP+GLLS L+P P+VL THFFMVA + L P PTP +++ H A IIMPLLE+E T L+W P++ + ++ P+
Sbjct: 128 DVIIVGAGTAGCSMAVGLAKQGRKVLVIEKSLEYQDRFVGELMQPGGLEALRSLDLIECAETSTD-VKTLGYSILLPHS-------------DHIMLPYPDRAPHTFLEYMGLSRADNGT--------GKQHGRGFHNGAFVQRLRARMLAEPNVTVVEGTVSKLLLEQPAKSSTSVCTGIQFRRKALSDDV-----EMPVETASAPLVIASDGLWSGLRRDLSTDVPKQISSFVAILMTHPAMEATVPFRNFGHVILAHPSPILMYQISPTETRVLVDVPGKVPSSSNGDLTKHLLTHVAPQIPDASRAAFVRAVETGPVKSMPNREFMTTQPAHIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNNLLKNVDLSSGKDVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSADDDDKHVLAARATLRESCYEYLKMGGVFMAGPLGLLSALTPKPFVLATHFFMVAGYAAIRCLAPFPTPYRLYHCFQVFHQACVIIMPLLERENVTILAWAPLRALINVIFPY 629
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A024UQZ3_9STRA (Squalene monooxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQZ3_9STRA) HSP 1 Score: 414 bits (1064), Expect = 6.570e-129 Identity = 236/534 (44.19%), Postives = 318/534 (59.55%), Query Frame = 1
Query: 301 EVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLL-----KGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQG-TLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPE------DPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPWEH 1863
+V++VGAGTAG S A+ L +QGRKVL+VEK + QDR VGEL+QPGGL AL L L +CA+ +D V GY+I++ D ++L YP+C PK E+ G G GR FHN FVQR+R LAEPN+ VVE TVS L+ KG V G+++R + + LAPL + +DG+WSGLR+ + ++P+ +S+FV +L+TH A VP + GHV+LA PSP L+YQIS TETRVLVDV G +PS+ NG L K L APQ+P++ + AF+ AV G VKSMPNR ++ G +++GD NMRHPLTGGGM+VA+KDV LL +LL+ V +A V F + R H+ST+NILANALY +FS P D + R L+ +C++YL +GG + AGP+GLLS L+P P VL THFFMVA L P PTPS ++ H A IIMPLLE+E T +W P++ + ++ P+ +
Sbjct: 130 DVIVVGAGTAGCSIAMGLAKQGRKVLVVEKSLEYQDRFVGELMQPGGLEALRSLDLIDCAETSMD-VKTLGYSILRP-------------HHDHIMLPYPNCAPKTLIEYMGFTRNDNGT--------GKQHGRGFHNGAFVQRLRARILAEPNITVVEGTVSKLVLEPTTKGSQSNVCKGIQFRRKSPSDDV-----EMPVETALAPLVIASDGLWSGLRRDLSKDQPKQISSFVALLMTHPAMEATVPFRQFGHVILAQPSPILMYQISPTETRVLVDVPGKVPSSTNGDLTKHLLSHVAPQIPEASRAAFIRAVETGPVKSMPNREFMTTQPANIGRVVMLGDTFNMRHPLTGGGMSVALKDVVLLNELLKNVDLSSGKEVAAVRRAFEQDRVHHSSTVNILANALYHIFSVPSTDDDVVDKAVLAARATLRESCYEYLKMGGFFMAGPLGLLSALTPKPVVLATHFFMVAGFAASRCLAPFPTPSRVYHCCQVFHQACIIIMPLLERENVTIFAWAPLRAMINVIFPYRN 636
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Match: A0A067C943_SAPPC (Squalene monooxygenase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C943_SAPPC) HSP 1 Score: 411 bits (1056), Expect = 6.660e-128 Identity = 241/586 (41.13%), Postives = 329/586 (56.14%), Query Frame = 1
Query: 103 PLALPIAGAIASLTYLFGFFGVSIISAVMDPPFAQSPAPSPKAASANKPTGAMSASGSSVYSLEDPEVVIVGAGTAGASAAVTLGRQGRKVLLVEKCMREQDRIVGELLQPGGLRALERLGLDECAKEGIDSVIVNGYAIIQAANAIIEKRERDSDERDGVLLYYPSCDPKNKTEFFGKGVTPKGAVDADIKRDDVPRGRSFHNSRFVQRIREVALAEPNVRVVEATVSGLLKGKGGEVV-GVRYREAAKEGEEGAGAQARVTREVLAPLTLVADGIWSGLRKCANNNRPQTLSTFVGVLVTHEPNAAPVPHKNCGHVVLAHPSPSLIYQISSTETRVLVDVAGSMPSAANGGLVKFLREESAPQLPKSFQPAFLEAVARGDVKSMPNRALSSSNVHRQGTLLIGDALNMRHPLTGGGMTVAIKDVELLCKLLEGVSFEDTAAMAEVSSRFHRQRTAHASTINILANALYQVFSTPEDPSSKDTRVDLQTACFDYLSLGGCYSAGPVGLLSGLSPVPWVLTTHFFMVAFHGCRTHLLPMPTPSGFLRVYRLLHVATKIIMPLLEQEGSTFLSWWPVKKAMQLLLPW 1857
PL+ A + +L YL GF G+ + P+PK + +K T A D +V+I+G GT G + A+ L +QG+KVL+ EK + QDR VGEL+QPGGL AL L L +CA+ D + +GY I++ D ++L YP PK E+ G G GR FHN FV R+R A NV +E TV+ LL ++ GV+YR A + T APL LV DG+WSGLR+ + P+ +S+F+ +L+ H P A VP++ GHV+LA PSP ++YQIS TETR LVDV G +PS +NG L K L APQ+P++ + AF++AV G VKSMPNR ++ ++IGD+ NMRHPLTGGGM+VA++D LL LLE D A+A F QR H+STINILANALY VFS P+ S+ R +++ +C+ YL LGG +S+GP+GLL L+P P+VL HF MVA + L P PTPS + YR+ H A I+MPL+ +E TFL+W P+ + LL P+
Sbjct: 83 PLSFVQAAGVVALVYLLGFVGMWAVK------------PTPKYTN-DKYTEAN----------RDADVIIIGGGTTGCAMAMGLAKQGKKVLVFEKTLEYQDRFVGELMQPGGLDALRSLDLLDCAETETD-IKADGYTIVKTKKGA----------EDHIMLPYPERVPKTFFEYMGFARGDNGT--------GKQHGRGFHNGLFVDRLRAKVFAHENVTCIEGTVTKLLSDSKTDICRGVQYRRKATSDDV-----EMPTEHAKAPLVLVCDGLWSGLRRELSTESPKQISSFIAILMKHPPMEATVPYRGYGHVILAEPSPIVVYQISPTETRALVDVPGKVPSQSNGDLTKHLINVVAPQMPEASRAAFVQAVQDGPVKSMPNREFMTTQPSLGRCIMIGDSWNMRHPLTGGGMSVALRDAVLLSSLLEKTDLVDADAIAAARHAFEEQRVNHSSTINILANALYHVFSIPDGYSNAAAREEIRESCYQYLKLGGMFSSGPLGLLCALTPKPFVLVAHFCMVAGYAASRVLTPFPTPSKLVHCYRVFHEACLILMPLVLREDVTFLAWTPIAAFINLLFPY 621 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12602.1938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12602.1938.1 >prot_H-elongata_contig12602.1938.1 ID=prot_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=612bp MYRIVRIWNGTLNPINAFPLALPIAGAIASLTYLFGFFGVSIISAVMDPPback to top mRNA from alignment at H-elongata_contig12602:862..4355- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12602.1938.1 ID=mRNA_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3494bp|location=Sequence derived from alignment at H-elongata_contig12602:862..4355- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12602:862..4355- >mRNA_H-elongata_contig12602.1938.1 ID=mRNA_H-elongata_contig12602.1938.1|Name=mRNA_H-elongata_contig12602.1938.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3672bp|location=Sequence derived from alignment at H-elongata_contig12602:862..4355- (Himanthalia elongata Himel1 dioecious)back to top |