mRNA_H-elongata_contig12593.1934.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12593.1934.1
Unique NamemRNA_H-elongata_contig12593.1934.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: D8LBH2_ECTSI (Asparaginase, c-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH2_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 4.650e-106
Identity = 165/254 (64.96%), Postives = 202/254 (79.53%), Query Frame = 3
Query:  513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGA---DVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESDLP 1265
            M+G +M+YGAV+A+R  +    + +AAR+VMERSPH VLAGEGAT FA+ NG+EAAE LTD++++ FE WR +   +      S+ RGESHDTV ++CLD DGNL AGTSTSGWKFK PGRVGD+PVVG+GLYCD+SVGAAVATGDGE+ILRTCLSF VVE MR GDSP LACKKGI+R  E V R   G    +V+RMHD +TVAVMAM+  G++GAASTLGP +VHRGRP FPLA+WRKG+  RVV E+++P
Sbjct:    1 MEGTSMSYGAVLAVRGVV---KAFSAARVVMERSPHSVLAGEGATTFAVRNGIEAAETLTDDAKQQFEDWRRQHLEEEG----SDHRGESHDTVGVICLDHDGNLCAGTSTSGWKFKHPGRVGDAPVVGSGLYCDSSVGAAVATGDGEEILRTCLSFAVVEFMRGGDSPQLACKKGIARLEETVKRSAAGRSVEEVNRMHDRLTVAVMAMNPKGDIGAASTLGPRNVHRGRPSFPLAIWRKGDPVRVVEETEIP 247          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A7S4KZ67_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZ67_GUITH)

HSP 1 Score: 288 bits (736), Expect = 2.400e-90
Identity = 158/290 (54.48%), Postives = 198/290 (68.28%), Query Frame = 3
Query:  303 KVRPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLG 1172
            KV P A+ATW FGEIAV  A   L +G +A+DA E   + AVELD QDQYFVG+GGLPN DGVMELDAA+M G+    G V+A+ QG+  S+ ++ AR +ME   H VLAGEGA  FAL NG +    LTDESR+ FE W+ +Q         + D+  SHDT+ ++C D+ G L   TSTSGWKFK PGRVGDSP+VG+G Y D + GAAVATGDGE+I+R CLSFLVVE MR GDSP  AC+  I+R R I          +R H  +TV ++AM++ G+VGA+STLG
Sbjct:   34 KVTPCAVATWKFGEIAVREAARWLAEGHSAVDAAE-RAVNAVELDTQDQYFVGVGGLPNRDGVMELDAAIMRGRGYRLGCVLAV-QGI--STPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN-------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARLRAIQSSGASFQGENRQHKKLTVGIVAMNTNGDVGASSTLG 312          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: W7U6H4_9STRA (N-(Beta-n-acetylglucosaminyl)-l-asparaginase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6H4_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.990e-88
Identity = 169/345 (48.99%), Postives = 216/345 (62.61%), Query Frame = 3
Query:  327 TWMFGEIAVDAAKGLLDDGAT--------------------ALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGK-----------AAGAGASEDRGES---HDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESD 1259
            TW+FG +AV+ A  +L   +T                    ALDA+EA GI  VELDNQDQY+VG GG PNA+G MELDAA+M G    YG V A+ QG+  S +++ AR VME S H +L G GA+ FA + G E  E L+  +R+ +  W+  + GK           +AG  A    G++   HDTV ++ LD  GNLAAGTSTSGW FK PGRVGDSP+VG+GLY D++VG AVATGDGE+I+R CLSFLVVE MR G  P LAC+ GI R + ++   G   +   MH+++TVAVMA+   G VGAASTLG  + HRGRP FP  VW++G     V E+D
Sbjct:   88 TWLFGRLAVEKAAEVLLSSSTSPTAPPSIDHPSETNLATSIALDAVEA-GINVVELDNQDQYYVGYGGFPNAEGEMELDAAIMCGSRKTYGGVAAL-QGV--SRAISVARRVMEESVHSLLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNE-GKEGPQVDGRKEESAGVPAPPREGDAVAPHDTVGLLVLDAHGNLAAGTSTSGWCFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIQRLKVLIREGGGEGERQGMHESLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEEAD 427          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A4D9D6T5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T5_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.350e-80
Identity = 143/285 (50.18%), Postives = 182/285 (63.86%), Query Frame = 3
Query:  444 DQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASE-------------DRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESD 1259
            +QY+VG GG PNA+G MELDAA+M G    YG V A+ QG+  S +++ AR VME S H  L G GA+ FA + G E  E L+  +R+ +  W+  +  +A      E             D    HDTV ++ LD  GNLAAGTSTSGW+FK PGRVGDSP+VG+GLY D++VG AVATGDGE+I+R CLSFLVVE MR G  P LAC+ GI R + ++   G   +   MH+N+TVAVMA+   G VGAASTLG  + HRGRP FP  VW++G     V E+D
Sbjct:    4 EQYYVGYGGFPNAEGEMELDAAIMCGSRKTYGGVAAL-QGV--SRAISVARRVMEESVHSFLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNEGKEAPQVDGREEESARVPAPPREGDAAAPHDTVGLLVLDAHGNLAAGTSTSGWRFKHPGRVGDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALACQAGIRRLKALISEGGGEGERQGMHENLTVAVMALDKEGRVGAASTLGEHNRHRGRPGFPFVVWKEGLGKAWVEEAD 285          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A836CML1_9STRA (Asparaginase, c-terminal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML1_9STRA)

HSP 1 Score: 253 bits (645), Expect = 5.240e-78
Identity = 141/260 (54.23%), Postives = 175/260 (67.31%), Query Frame = 3
Query:  513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQ--TGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREI-------VDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESDLP 1265
            M G+ + YGAVMA+   +    +++AARLVMERSPH +L G GA  FA+ANG+  AEALT+ +   +  WR +   +   AGA  S +    HDT+ M+CLD +G+LAAGTSTSGW FK PGRVGDSPV+GAGLYCD   GAAVATGDGE+ILRT  +F  VE MRAG +P  AC K ++R  +            G  AD SRMH  +TVAV+AMS  GEVGAAS+LGP++VHRGRPVFP A+WR G    +V E   P
Sbjct:    1 MCGEHLTYGAVMALPGVVR---AVSAARLVMERSPHAILCGGGARDFAVANGMALAEALTEGAAAAYSEWRRQSDTSTDTAGATVSVEIDAPHDTIGMICLDVNGHLAAGTSTSGWPFKHPGRVGDSPVIGAGLYCDNDAGAAVATGDGEEILRTSAAFYAVELMRAGHTPQAACTKAVARIVQASAACSTSAAARGPRAD-SRMHSKLTVAVLAMSPKGEVGAASSLGPSNVHRGRPVFPYALWRGGSQGELVEEQKPP 256          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: L1INR1_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1INR1_GUITC)

HSP 1 Score: 229 bits (585), Expect = 3.260e-69
Identity = 128/251 (51.00%), Postives = 167/251 (66.53%), Query Frame = 3
Query:  513 MDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADV---SRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEATRVVNES 1256
            M G+    G V+A+ QG+  S+ ++ AR +ME   H VLAGEGA  FAL NG +    LTDESR+ FE W+ +Q         + D+  SHDT+ ++C D+ G L   TSTSGWKFK PGRVGDSP+VG+G Y D + GAAVATGDGE+I+R CLSFLVVE MR GDSP  AC+  I+R R   + L  GA     +R H  +TV ++AM++ G+VGA+STLGP ++HRG+P FP  VW++  A RV  ES
Sbjct:    1 MRGRGYRLGCVLAV-QGI--STPVSVARKLMEHGQHTVLAGEGAKTFALENGFKEENILTDESRREFELWKREQN-------FTVDKEASHDTIGIICRDETGELVVATSTSGWKFKLPGRVGDSPLVGSGFYVDQACGAAVATGDGEEIMRGCLSFLVVERMRMGDSPTRACEHAIARLRSKKEFLS-GASFQGENRQHKKLTVGIVAMNTNGDVGASSTLGPANIHRGKPAFPCIVWKQVGA-RVGGES 239          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A496SGX4_9BACT (Glycosylasparaginase n=4 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A496SGX4_9BACT)

HSP 1 Score: 226 bits (577), Expect = 1.480e-67
Identity = 143/308 (46.43%), Postives = 188/308 (61.04%), Query Frame = 3
Query:  312 PTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEA 1235
            P A+ATW FG+ AV+ A   L +G TALDA+EA GI  VE D +    VGLGGLPN++GV+ELDAA+M+GKT+  GAV A+R  LH    ++ AR VME + H +L GEGA KFAL +G    +  T+ESR+ +  W+                 ++HDT+ +V LD +GN+AAG STSG  +K PGRVGDSP+VGAGLY D  VG A ATG GEDI+R C  FLVVE+MR G SP  AC + +   R I +R G+          V+V ++A+   G  GAA       + +G   FP AV  +G +
Sbjct:    4 PAAVATWRFGKKAVEGAMKALREGGTALDAVEA-GIKVVEADPEVDS-VGLGGLPNSEGVVELDAAIMEGKTLRVGAVAALRDVLH---PISVARKVMEETQHVLLVGEGALKFALEHGFRKQDLTTEESRRKWREWK-----------------DAHDTIGLVVLDGEGNMAAGCSTSGSAYKLPGRVGDSPIVGAGLYVDDDVGGAAATGRGEDIMRYCSCFLVVEHMRRGLSPQEACLEVV---RRIYEREGK----------VSVNLVALDREGRYGAAG------IKKG---FPYAVGFEGRS 267          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A2D6CUP6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A2D6CUP6_9BACT)

HSP 1 Score: 224 bits (570), Expect = 2.590e-66
Identity = 143/310 (46.13%), Postives = 187/310 (60.32%), Query Frame = 3
Query:  309 RPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEAT 1238
            R  A+ATW FG+ AV A+   L DG +A+DA+EA GI   ELD   ++ VG GGLPN DGV+++DAAVMDG T+  GAV ++ +G+   + ++ AR VM  S H  L GEGA +FA  +G    E LTDE+R+ ++ WR          G+    G+ HDT+ ++ LD DGNLAAG STSG  FK+ GRVGDSP++G+GLY D   GAA ATG GE+IL+ C+SF VVE MRAG  P  AC+   SR   ++ R  E A+          AV+A+   G  G  +T         R  F  AVWR GEAT
Sbjct:   13 RGVAVATWKFGQAAVAASGAALSDGGSAMDAVEA-GIRVAELD-ASEHSVGYGGLPNEDGVVQMDAAVMDGATLDVGAVASL-EGVR--APISVARRVMTDSRHVFLVGEGAGRFARKHGFGVEETLTDEARRKWQEWR----------GSPNRNGDGHDTIGLLSLDADGNLAAGCSTSGVGFKEVGRVGDSPLIGSGLYADNEGGAAAATGLGEEILKFCMSFQVVEFMRAGLPPTEACRAAASR---MLARRPETAEHM-------AAVVALDPQGRAGGYAT---------RDGFSYAVWRDGEAT 288          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A7C7Q882_9BACT (Glycosylasparaginase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A7C7Q882_9BACT)

HSP 1 Score: 219 bits (558), Expect = 1.060e-64
Identity = 143/309 (46.28%), Postives = 181/309 (58.58%), Query Frame = 3
Query:  312 PTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELD-NQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVWRKGEA 1235
            P A+ATW FG+ AV+ A  +L  G  ALDA+EA GI  VE D N D   VGLGG PN++GV+ELDAA+MDG T   GAV A+R  LH    ++ AR VME + H +LAGEGA +FAL  G    +  T++SR+ +  W+               +   HDT+ +V LD DGNLAAG STSGW +K PGRVGDSP+VGAGLY D  VGAA ATG GEDI+R C  FLVVE MR G  P  AC   ++  R I +R G           V + ++A+   G  G A       + +G   FP AV  +G +
Sbjct:    5 PVAVATWRFGKEAVEDAARVLRGGGNALDAVEA-GIRVVEADPNVDT--VGLGGAPNSEGVVELDAALMDGATCRAGAVAALRDILH---PISVARKVMEETSHVLLAGEGALRFALEQGFRRQDLTTEKSRRKWREWK---------------QARCHDTIGLVVLDGDGNLAAGCSTSGWAYKLPGRVGDSPIVGAGLYADNEVGAAAATGRGEDIMRYCSCFLVVEYMRQGLPPQEAC---LAVLRRIYEREG---------GKVQLCLIALDKEGRYGTAG------MKKG---FPYAVHLEGRS 271          
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Match: A0A524AQX5_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A524AQX5_9CHLR)

HSP 1 Score: 216 bits (550), Expect = 1.800e-63
Identity = 138/306 (45.10%), Postives = 183/306 (59.80%), Query Frame = 3
Query:  303 KVRPTAIATWMFGEIAVDAAKGLLDDGATALDALEAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAIRQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESRKVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGWKFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMRAGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVGAASTLGPTSVHRGRPVFPLAVW 1220
            +V P AIATW  G +AV AA  +L  G +AL+A+E +GI  +ELD  D + VG GG PNA+G++ELDAA+MDG+T   G+V A+R+       ++ AR VME S H +L  +GA  FAL++G  A + LT ES      WR  Q  + AG+         HDT+ +V LD +G++A G STSGW  K PGRVGDSP++G+GLY D  VG A ATG GE+IL+ C SFLVVE MR G SP+ AC++ I R      +  E          VT+ ++A++  GE GAA T         R  F  AVW
Sbjct:    5 RVVPGAIATWKTGLVAVRAAGQVLIAGGSALEAVE-KGINLIELD-PDVHSVGYGGWPNAEGIVELDAAIMDGRTHDAGSVAALRR---IRRPISVARRVMEASQHAMLVADGALAFALSHGFSAEDLLTQESMAK---WREWQRDEQAGSPTP------HDTIGLVALDGEGDIACGCSTSGWPHKPPGRVGDSPLIGSGLYVDNDVGGAAATGLGEEILKFCASFLVVEQMRNGHSPMDACRRTIERILRKKPQARE----------VTIGLVALNGRGESGAACT---------RSGFEYAVW 277          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12593.1934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH2_ECTSI4.650e-10664.96Asparaginase, c-terminal n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4KZ67_GUITH2.400e-9054.48Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
W7U6H4_9STRA1.990e-8848.99N-(Beta-n-acetylglucosaminyl)-l-asparaginase n=2 T... [more]
A0A4D9D6T5_9STRA1.350e-8050.18Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A836CML1_9STRA5.240e-7854.23Asparaginase, c-terminal n=1 Tax=Tribonema minus T... [more]
L1INR1_GUITC3.260e-6951.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A496SGX4_9BACT1.480e-6746.43Glycosylasparaginase n=4 Tax=Candidatus Latescibac... [more]
A0A2D6CUP6_9BACT2.590e-6646.13Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
A0A7C7Q882_9BACT1.060e-6446.28Glycosylasparaginase n=1 Tax=Candidatus Latescibac... [more]
A0A524AQX5_9CHLR1.800e-6345.10Uncharacterized protein n=1 Tax=Anaerolineales bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12593contigH-elongata_contig12593:5827..8429 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.4
Seed ortholog evalue9.1e-87
Seed eggNOG ortholog2880.D8LBH2
KEGG koko:K01444
KEGG Pathwayko00511,ko04142,map00511,map04142
EggNOG free text desc.N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
EggNOG OGsCOG1446@1,KOG1593@2759
EC3.5.1.26
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionAsparaginase, c-terminal
Ec32 orthologEc-27_003980.1
Exons4
Model size1396
Cds size1176
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12593.1934.1prot_H-elongata_contig12593.1934.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12593 5931..8313 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929745.4278142-UTR-H-elongata_contig12593:5826..59301622929745.4278142-UTR-H-elongata_contig12593:5826..5930Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12593 5827..5930 +
1691679141.126987-UTR-H-elongata_contig12593:5826..59301691679141.126987-UTR-H-elongata_contig12593:5826..5930Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12593 5827..5930 +
1622929745.5240893-UTR-H-elongata_contig12593:8313..84291622929745.5240893-UTR-H-elongata_contig12593:8313..8429Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12593 8314..8429 +
1691679141.1897295-UTR-H-elongata_contig12593:8313..84291691679141.1897295-UTR-H-elongata_contig12593:8313..8429Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12593 8314..8429 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929745.45055-CDS-H-elongata_contig12593:5930..62371622929745.45055-CDS-H-elongata_contig12593:5930..6237Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 5931..6237 +
1691679141.1366222-CDS-H-elongata_contig12593:5930..62371691679141.1366222-CDS-H-elongata_contig12593:5930..6237Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 5931..6237 +
1622929745.4725592-CDS-H-elongata_contig12593:7066..72421622929745.4725592-CDS-H-elongata_contig12593:7066..7242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7067..7242 +
1691679141.1440125-CDS-H-elongata_contig12593:7066..72421691679141.1440125-CDS-H-elongata_contig12593:7066..7242Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7067..7242 +
1622929745.492763-CDS-H-elongata_contig12593:7441..76921622929745.492763-CDS-H-elongata_contig12593:7441..7692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7442..7692 +
1691679141.1515224-CDS-H-elongata_contig12593:7441..76921691679141.1515224-CDS-H-elongata_contig12593:7441..7692Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7442..7692 +
1622929745.5083306-CDS-H-elongata_contig12593:7871..83131622929745.5083306-CDS-H-elongata_contig12593:7871..8313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7872..8313 +
1691679141.1773322-CDS-H-elongata_contig12593:7871..83131691679141.1773322-CDS-H-elongata_contig12593:7871..8313Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12593 7872..8313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12593.1934.1

>prot_H-elongata_contig12593.1934.1 ID=prot_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp
MSYLHGPARTWLMLVAGCTIGALSIVAGVVSSRSKSKLNLFSVSASRHHE
DITSNNENMSGDRSNEKVRPTAIATWMFGEIAVDAAKGLLDDGATALDAL
EAEGITAVELDNQDQYFVGLGGLPNADGVMELDAAVMDGKTMAYGAVMAI
RQGLHNSSSLAAARLVMERSPHCVLAGEGATKFALANGVEAAEALTDESR
KVFEAWRFKQTGKAAGAGASEDRGESHDTVAMVCLDDDGNLAAGTSTSGW
KFKQPGRVGDSPVVGAGLYCDASVGAAVATGDGEDILRTCLSFLVVENMR
AGDSPVLACKKGISRAREIVDRLGEGADVSRMHDNVTVAVMAMSSTGEVG
AASTLGPTSVHRGRPVFPLAVWRKGEATRVVNESDLPLESE*
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mRNA from alignment at H-elongata_contig12593:5827..8429+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12593.1934.1 ID=mRNA_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2603bp|location=Sequence derived from alignment at H-elongata_contig12593:5827..8429+ (Himanthalia elongata Himel1 dioecious)
ATTATAAGTACTGTACTGTATATGTTTTTTTTCGCTCCGAGTTTAGAAGA GGTCACATTATCACCGTACTCGTTTGCGATTGGTTTGATAATCTTGAGGC CACCATGAGTTATCTTCATGGGCCTGCACGAACGTGGTTGATGCTAGTCG CGGGATGTACAATTGGGGCCCTCTCAATCGTCGCTGGCGTTGTGAGTTCA AGATCCAAATCCAAACTAAATCTCTTCAGTGTGTCGGCGTCGCGACATCA CGAGGATATTACTAGTAATAACGAAAATATGAGTGGCGACCGGAGTAATG AAAAGGTGCGACCTACAGCCATCGCGACGTGGATGTTTGGCGAGATAGCG GTGGACGCGGCGAAGGGCTTGCTCGACGATGGGGCGACAGCTCTTGATGC CTTGGAAGCAGGTACGTGTGCTATGTATCGCTGCTGGTATCTAATCAATT GTAATACAAACCTTGTGTTGGCATTCGTAATCTCCAAACCTACCGCCTGG AATATAGAACGTAATATATCTAGATCTGTTGTTCATCTAACACACCGATA CCGATTACCGATTGGAGGTATTCCCATAAGGAGGCGGCGCCACACCGATT TGCAAATAACCCCCAATCGCTCATGGTACGCTGAACATAGAAAATATAAT AGGAAGAAACAAAATAACGTTTCCTCTTAATTTCCTCTAAAGTTCATAAT CATATAATCATGAGACCCCTGACATTATTCCGTTGACCCGATGAACTTAC CATTGGGGAACACGATTAGTCACGTGGTGTGACGATTTTGTGCTCAAAGG TAGTAATATACAAAGGACTGCACCTCTCACGGTGTTAAGAAGGTTGTTGT TGGTGGTGTTGGTCACACATTTAGCAGGAGACCAACCGGATTTGGTTGCC TTCTGCTCGTGGTCAGCTGAACAGGACCGGCGTGGCGCCCCCTTACGTGT CTTGCCGGTTTGCGCGGTTTAATGCAAATTGATAAAAAGGGAAAACAATT TTCCCCTGTATCCGTTGTCTGGATGTTAATATTTATTTCAAGAAAAATAT TCGTTGTACGACATCCCAGCGAAGCGCTGTCGTACATTATAACTCCGTTC AAACCCTCCGAATATCCACGCCTTCTTAGCACCGTAAGATGCACCAGTGG GTGACGTCCACTAAACCCGAGTGGCTAACAGTTATTGTCAGATCCCTGAA CGAACAAGTTTGCTTGTGAACTTTACCGATCCTGCCGGAGAAGGCATCAC GGCTGTTGAACTCGATAATCAAGATCAGTACTTTGTCGGACTCGGCGGTT TGCCCAACGCGGACGGGGTGATGGAGCTCGACGCTGCTGTCATGGACGGC AAGACGATGGCATATGGCGCGGTCATGGCCATAAGGCAAGGACTTCACAA TTCATCATCCCTGGCGGTGGTGATGTGAACTTGACGTCACCGCTTCGTTT CTCACAGCTTCAGCTTTCAGTTTGTGCAAGCACAATTCACGAACTATATA ACCACTAATAAATCTTAAACACGCTGTTCGTTTCCCTTAAACATATTCCC GCATGTAATTATTGTCCACTTCGTGCCTTTGCATTTTTAATAGGGGAGTC GTCACGGCTTTCAAGGCCGCCCGCTTGGTCATGGAACGCAGTCCACACTG TGTTCTTGCTGGCGAGGGTGCCACAAAGTTTGCTCTCGCGAACGGGGTAG AGGCGGCCGAGGCTCTAACGGACGAATCTCGGAAAGTTTTCGAAGCTTGG AGGTTTAAACAGACCGGCAAAGCGGCAGGGGCGGGTGCAAGCGAAGACCG AGGAGAATCGCACGATACCGTCGCGATGGTGTGCTTGGATGATGACGGAA ACCTCGCCGCTGGGACGTGAGACGAATGTTAAGAGGGTATCATTACGCTA TTGCGTTTCATCCTTCTAAAACGATATTACTTCAATACCCCGAACTGGCC CTGCCTTAGTAGAAGCTCAAAGTAACGTGTTAACCGTATATTATGCTTGC ATTGTTCTAAATATCTCCCTCTACCGCGAGCTGTCGCCTTGGCAGATCCA CATCTGGATGGAAGTTCAAACAACCCGGTCGTGTTGGGGACTCTCCTGTC GTCGGGGCCGGGCTTTACTGTGATGCAAGCGTCGGGGCAGCAGTGGCGAC GGGCGACGGTGAAGACATTCTTCGGACCTGCTTGAGCTTTCTGGTTGTGG AAAATATGCGCGCAGGCGACTCTCCGGTCTTAGCGTGTAAGAAGGGTATC TCTAGGGCACGCGAAATCGTGGATCGACTGGGAGAGGGTGCTGATGTGTC GAGAATGCACGACAACGTCACGGTGGCCGTGATGGCCATGAGTTCTACCG GGGAGGTGGGCGCGGCCTCTACGTTAGGACCGACAAGCGTTCACCGTGGA CGCCCAGTGTTTCCGTTGGCTGTGTGGAGAAAGGGCGAGGCTACTCGTGT AGTGAACGAGAGTGACTTACCGCTGGAGAGCGAATGAAAATAAGTTGGGG TTGCGCCTCGTTACCCAAGTTTTGTGTCTGAGTACGTTCTTCTTCTTATC TTCTTACCTTGGAACAGAACGGCCAGAACGGCCAGGTGATCAGGTGTCGC GTC
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Coding sequence (CDS) from alignment at H-elongata_contig12593:5827..8429+

>mRNA_H-elongata_contig12593.1934.1 ID=mRNA_H-elongata_contig12593.1934.1|Name=mRNA_H-elongata_contig12593.1934.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2352bp|location=Sequence derived from alignment at H-elongata_contig12593:5827..8429+ (Himanthalia elongata Himel1 dioecious)
ATGAGTTATCTTCATGGGCCTGCACGAACGTGGTTGATGCTAGTCGCGGG
ATGTACAATTGGGGCCCTCTCAATCGTCGCTGGCGTTGTGAGTTCAAGAT
CCAAATCCAAACTAAATCTCTTCAGTGTGTCGGCGTCGCGACATCACGAG
GATATTACTAGTAATAACGAAAATATGAGTGGCGACCGGAGTAATGAAAA
GGTGCGACCTACAGCCATCGCGACGTGGATGTTTGGCGAGATAGCGGTGG
ACGCGGCGAAGGGCTTGCTCGACGATGGGGCGACAGCTCTTGATGCCTTG
GAAGCAGATGAGTTATCTTCATGGGCCTGCACGAACGTGGTTGATGCTAG
TCGCGGGATGTACAATTGGGGCCCTCTCAATCGTCGCTGGCGTTGTGAGT
TCAAGATCCAAATCCAAACTAAATCTCTTCAGTGTGTCGGCGTCGCGACA
TCACGAGGATATTACTAGTAATAACGAAAATATGAGTGGCGACCGGAGTA
ATGAAAAGGTGCGACCTACAGCCATCGCGACGTGGATGTTTGGCGAGATA
GCGGTGGACGCGGCGAAGGGCTTGCTCGACGATGGGGCGACAGCTCTTGA
TGCCTTGGAAGCAGAAGGCATCACGGCTGTTGAACTCGATAATCAAGATC
AGTACTTTGTCGGACTCGGCGGTTTGCCCAACGCGGACGGGGTGATGGAG
CTCGACGCTGCTGTCATGGACGGCAAGACGATGGCATATGGCGCGGTCAT
GGCCATAAGGCAAGGACTTCACAATTCATCATCCCTGGCGAAGGCATCAC
GGCTGTTGAACTCGATAATCAAGATCAGTACTTTGTCGGACTCGGCGGTT
TGCCCAACGCGGACGGGGTGATGGAGCTCGACGCTGCTGTCATGGACGGC
AAGACGATGGCATATGGCGCGGTCATGGCCATAAGGCAAGGACTTCACAA
TTCATCATCCCTGGCGGCCGCCCGCTTGGTCATGGAACGCAGTCCACACT
GTGTTCTTGCTGGCGAGGGTGCCACAAAGTTTGCTCTCGCGAACGGGGTA
GAGGCGGCCGAGGCTCTAACGGACGAATCTCGGAAAGTTTTCGAAGCTTG
GAGGTTTAAACAGACCGGCAAAGCGGCAGGGGCGGGTGCAAGCGAAGACC
GAGGAGAATCGCACGATACCGTCGCGATGGTGTGCTTGGATGATGACGGA
AACCTCGCCGCTGGGACGCCGCCCGCTTGGTCATGGAACGCAGTCCACAC
TGTGTTCTTGCTGGCGAGGGTGCCACAAAGTTTGCTCTCGCGAACGGGGT
AGAGGCGGCCGAGGCTCTAACGGACGAATCTCGGAAAGTTTTCGAAGCTT
GGAGGTTTAAACAGACCGGCAAAGCGGCAGGGGCGGGTGCAAGCGAAGAC
CGAGGAGAATCGCACGATACCGTCGCGATGGTGTGCTTGGATGATGACGG
AAACCTCGCCGCTGGGACATCCACATCTGGATGGAAGTTCAAACAACCCG
GTCGTGTTGGGGACTCTCCTGTCGTCGGGGCCGGGCTTTACTGTGATGCA
AGCGTCGGGGCAGCAGTGGCGACGGGCGACGGTGAAGACATTCTTCGGAC
CTGCTTGAGCTTTCTGGTTGTGGAAAATATGCGCGCAGGCGACTCTCCGG
TCTTAGCGTGTAAGAAGGGTATCTCTAGGGCACGCGAAATCGTGGATCGA
CTGGGAGAGGGTGCTGATGTGTCGAGAATGCACGACAACGTCACGGTGGC
CGTGATGGCCATGAGTTCTACCGGGGAGGTGGGCGCGGCCTCTACGTTAG
GACCGACAAGCGTTCACCGTGGACGCCCAGTGTTTCCGTTGGCTGTGTGG
AGAAAGGGCGAGGCTACTCGTGTAGTGAACGAGAGTGACTTACCGCTGGA
GAGCGAATGAATCCACATCTGGATGGAAGTTCAAACAACCCGGTCGTGTT
GGGGACTCTCCTGTCGTCGGGGCCGGGCTTTACTGTGATGCAAGCGTCGG
GGCAGCAGTGGCGACGGGCGACGGTGAAGACATTCTTCGGACCTGCTTGA
GCTTTCTGGTTGTGGAAAATATGCGCGCAGGCGACTCTCCGGTCTTAGCG
TGTAAGAAGGGTATCTCTAGGGCACGCGAAATCGTGGATCGACTGGGAGA
GGGTGCTGATGTGTCGAGAATGCACGACAACGTCACGGTGGCCGTGATGG
CCATGAGTTCTACCGGGGAGGTGGGCGCGGCCTCTACGTTAGGACCGACA
AGCGTTCACCGTGGACGCCCAGTGTTTCCGTTGGCTGTGTGGAGAAAGGG
CGAGGCTACTCGTGTAGTGAACGAGAGTGACTTACCGCTGGAGAGCGAAT
GA
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