prot_H-elongata_contig12593.1933.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12593.1933.1
Unique Nameprot_H-elongata_contig12593.1933.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length583
Homology
BLAST of mRNA_H-elongata_contig12593.1933.1 vs. uniprot
Match: D8LBH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 6.530e-101
Identity = 206/416 (49.52%), Postives = 269/416 (64.66%), Query Frame = 0
Query:  170 SKWVVMSAEQVEHAAKKLRGETDKNKTLQAKLEKHKHDRVLIYDAAMKQATEREEEGVKEVKRTFEREKIVMRAEVDQEVVKVNDLYEKRCRDYAQMVSDECEEEISTASAELRKDWARQKKTIAQLVREGAGKDRQASVAVIARAVMEHLLEEKMDEAAAMRTDIYTEVQMEFENRERTLRDALQSEFRADLDGQLLLAEIRHQKEIDNLRIELRGDHAPPTGVAGEAIVLFNRGCRECEGLGPRPKSLDSITKNSRHRQHRQKKPFRSEAAGNWGNDSGVSRAATVGGKSGLVKKLPIFRTPSQKASTSDLKKTSIKPT------SQRRPRIKSPSWSPKTGNLSSTFPEPLDCVFQHEDEEFDGNITSALTVSPTKAPGIVVTPSISIENVLVEEAASPVPQRPKKRGKRLFT 579
            SKW+++S EQVE  A+K+R + +KNK L+  ++ HK +RVLIYDAAMKQA +RE EGV EVK+  ER++ +MRAEVDQE+ K++DLY++RCRDYA MVSDEC+ E S A+ +LRKDWARQKKTI QLVR G  +DRQ SV  IARAV+E L EE+ DE A++R  IY++V+MEFE+RE  LRD L+S+F+ADLDGQLLLAEIRHQKE++ LR+EL G   P T      IV++N    +C G G R     S T +    +    K   SEA+G      GV    T  G   L +K P+F+TP QK       K +++P       S R+PR  S     +   +S+T P       + +++E D  ITSAL VSPTKA   VVTPSI  E  +  E +S    RPKKR K+LF+
Sbjct:   89 SKWMIVSKEQVEQTAEKMRDQAEKNKALETTVKIHKRERVLIYDAAMKQAAKRELEGVNEVKQVLERQQGMMRAEVDQEMQKISDLYQERCRDYATMVSDECDGEDSKAATDLRKDWARQKKTIDQLVRSGGEEDRQVSV--IARAVVEQLQEERRDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTGEIVVYNPETPQCAGRGQRSSGTSSFTPSPSFSRRPLHKMNISEASGGNSGADGVHVPTTPRGTQ-LGRKFPVFKTPVQKQIPGASNKKAVRPKEHPVRDSTRQPRNSSVG---RHTEISTTTP------IREQEDELDVGITSALMVSPTKAIYGVVTPSIGSEGEVSGEGSS----RPKKRAKKLFS 488          
BLAST of mRNA_H-elongata_contig12593.1933.1 vs. uniprot
Match: A0A6H5KNT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT9_9PHAE)

HSP 1 Score: 315 bits (806), Expect = 1.660e-96
Identity = 204/411 (49.64%), Postives = 263/411 (63.99%), Query Frame = 0
Query:  170 SKWVVMSAEQVEHAAKKLRGETDKNKTLQAKLEKHKHDRVLIYDAAMKQATEREEEGVKEVKRTFEREKIVMRAEVDQEVVKVNDLYEKRCRDYAQMVSDECEEEISTASAELRKDWARQKKTIAQLVREGAGKDRQASVAVIARAVMEHLLEEKMDEAAAMRTDIYTEVQMEFENRERTLRDALQSEFRADLDGQLLLAEIRHQKEIDNLRIELRGDHAPPTGVAGEAIVLFNRGCRECEGLGPRPKSLDSITKN-SRHRQHRQKKPFRSEAAGNWGNDSGVSRAATVGGKSGLVKKLPIFRTPSQKASTSDLKKTSIKPTSQRRPRIKSPSWSPKTGNLSSTFPEPLDCVFQHEDEEFDGNITSALTVSPTKAPGIVVTPSISIENVLVEEAASPVPQRPKKRGKRLFT 579
            SKW+++S EQVE  AKK+R + +KNK L+  ++ HK +RVLIYDAAMKQA +RE EGV EVK+  ER++ +MRAEVDQE+ K++DLY++RCRDYA+MVSDEC+ E S A  +LRKDWARQKKTI QLVR    +DRQ S   IARAV+E L EE+ DE A++R  IY++V+MEFE+RE  LRD L+S+F+ADLDGQLLLAEIRHQKE++ LR+EL G   P T      I+++N    +C G G R     S T + S  R+H  K      + GN G   GV    T  G   L +K P+F+TP QK       K +++P     P   S   S  +     T    +  + +HED   D  ITSAL VSPTKA   VVTPSI  E  +  E +S    RPKKR K+LF+
Sbjct:  169 SKWMIVSKEQVEQTAKKMRDQAEKNKALETTVKSHKRERVLIYDAAMKQAAKRELEGVDEVKQVLERQQGMMRAEVDQEMRKISDLYQERCRDYARMVSDECDGEDSKAVTDLRKDWARQKKTIDQLVRSSREEDRQVSA--IARAVVEQLQEERSDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTSEIIVYNPETLQCAGSGQRSSGASSFTASPSFSRRHLHKMNIGEASGGNSGA-GGVHVPTTPRGTQ-LGRKFPVFKTPVQKKIPGIGNKKAVRPKGH--PVSDSTRKSRNSSAGRHTKISTITPIREHEDY-LDVGITSALMVSPTKAIHGVVTPSIGSEGGVSGEGSS----RPKKRAKKLFS 568          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12593.1933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBH1_ECTSI6.530e-10149.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNT9_9PHAE1.660e-9649.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12593contigH-elongata_contig12593:2404..5151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12593.1933.1mRNA_H-elongata_contig12593.1933.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12593 2404..5151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12593.1933.1 ID=prot_H-elongata_contig12593.1933.1|Name=mRNA_H-elongata_contig12593.1933.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=583bp
QQYDWRLEVTDQRPKFGSSELEGKHPFDDRNDKGNGSSQVRPTAANLHDL
SLSFSDSIPTSSAESPALEQRAPILDHVGTTVERENSLAIVPFTGDRHFQ
PSSQTPGLRYRQFSLTPNDQQGLRFPPASDQFPVLTIGAPSVGGNEISND
KTATSNLKRGAISPRQEGRSKWVVMSAEQVEHAAKKLRGETDKNKTLQAK
LEKHKHDRVLIYDAAMKQATEREEEGVKEVKRTFEREKIVMRAEVDQEVV
KVNDLYEKRCRDYAQMVSDECEEEISTASAELRKDWARQKKTIAQLVREG
AGKDRQASVAVIARAVMEHLLEEKMDEAAAMRTDIYTEVQMEFENRERTL
RDALQSEFRADLDGQLLLAEIRHQKEIDNLRIELRGDHAPPTGVAGEAIV
LFNRGCRECEGLGPRPKSLDSITKNSRHRQHRQKKPFRSEAAGNWGNDSG
VSRAATVGGKSGLVKKLPIFRTPSQKASTSDLKKTSIKPTSQRRPRIKSP
SWSPKTGNLSSTFPEPLDCVFQHEDEEFDGNITSALTVSPTKAPGIVVTP
SISIENVLVEEAASPVPQRPKKRGKRLFTPQA*
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