prot_H-elongata_contig12584.1925.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12584.1925.1
Unique Nameprot_H-elongata_contig12584.1925.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length899
Homology
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BLAST of mRNA_H-elongata_contig12584.1925.1 vs. uniprot
Match: D8LQK9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQK9_ECTSI)

HSP 1 Score: 673 bits (1736), Expect = 6.000e-221
Identity = 463/979 (47.29%), Postives = 574/979 (58.63%), Query Frame = 0 
Query:    1 GDDAQTVECQVECARLLSSVAGRSATLLLSGGALGTLEDMIERLGAKHSSMMRSCCEALERVSQTETGRRSLEERGTGGILLATIRDFPDALDEGSDPALAPALKVVERIFTNKSSEACALSLRTHTEEESSDDPHRPTSSDYASCTETLLAVAEATPEAPGSAAASCLWWLSGASDVAPGRALAAILLAAADENAEKYAEEAEHRDSLGKDNEEKGTIDLLQWEIWSWFPRA------IENDAITDPPTAPRPLEAARFLAALCLCKPGLQSLEKRVRRDYPRAVG-ALVKLCRSEDPSLAGACLRVVKGLARGGLGEKVFLEAGALKQATEAGTRFESADDATIVXXXXXXXXXXXXXXXRARAIAAALGVVASLVEAAGEDARPLVDEAFHLSVRCLRKIGEFSGRPAAATAKSALDVITTRLSWSDRSKVLASSRCRISGAPSLMDGGSSFKKTKEIGEVDDQLSSGTPNRLSV---VGEVDEPMEVLGDASAILAAMKAHPMDLRVQQSGWKSLIAMDTGRGYVETLLAPGGDGKRTRRQMLRDALERHGGDSLVAGQVAEILEGLVLQGDS-DGE-NSLTASMSDVHGDESLCSPTCDIESSG------------------------------------------LGSTEDAHPRESSV---GED------VAVAGPEGD-PEMSGRDVA----ADAVADDKPANGGGGGDGVPVDDA-GSDDEIAPEDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVWLRLNLEGQKAL---GSEGAESGE--------LSEDGESTDGNGSIVGTRIVRALFGE-GVSDGGDHEVEYLIDTPRVRARAGRRAGASVLFYPLVISSSRMVCFKRALWIELERLHKDVMGRSELLGGDSADMVAAMFDPDALKEKVRDLLAGARGRKAKDAIAASSVAMVDALTAATEALAASQKEVQR 898
            GDDAQTVECQVECARL+SS+AG++A+LL+ GGALG +E M+E+LG  HSS+MR CCEALERVS+TE GR + EERGTGG+LLATIRDFP+AL+EGSD ALA ALKVVERIFT KS EACALSLR  +EEES DDPHRPT SDY +C ET+L V EATPEAPG+AAA+CLWWLSGAS  AP RAL+AIL AAA  +  +   EA       ++ E+     L+  ++WSWF R       ++ +    PP   RP+E ARFLAALCLC+PGL+ LE  V R+ PR V  ALV LC S DP LA AC R+++ LA+GG G +VF++AGAL  A  AG  FE  +DA  V                A AIAAALG VA+L +A G+DARP+VD+AF LSVRCL ++GE+SGRPAAA AKSALDVIT RL+  DR K  A  R   + A    + G +  +  E G   D+  SG P    V     +VD PME+L DA AILA MKAH  D RVQQSGW+SLIAMDTGRG VE      GDG ++RRQMLRD LERHGGDSLVAGQVA+ILEGLVLQGDS DG+ +SLTAS+SD  G+ES   P+   E+ G                                            ST+ AH +E      GED      + V G +GD PE  G +V     A AVA+     G   G   P+ DA G  + + PEDV                                                     + + L G K L   GS G+            ++ED  +  G GS     + R+LFG  G ++  +      ++  +  A+A     ASV     V+ S   +  +R+ W +LE LH D++GRS++LGG+SA MVAAM +P  LKE+V  LL       ++DA AA+S+A+V ALTAAT AL  SQKEVQR
Sbjct:  119 GDDAQTVECQVECARLMSSLAGQAASLLIDGGALGAIECMLEQLGGNHSSIMRPCCEALERVSRTEEGRATFEERGTGGVLLATIRDFPEALEEGSDVALASALKVVERIFTGKSPEACALSLRAKSEEESCDDPHRPTFSDYDNCVETVLTVVEATPEAPGAAAATCLWWLSGASSKAPDRALSAILAAAAVADGTEATNEA-------REAEKAAAQLLVSADVWSWFSRGDGGEGDVQEEGENVPPA--RPVEGARFLAALCLCRPGLECLEAAVERESPRRVAEALVTLCESADPLLARACFRIIERLAKGGTGPQVFVDAGALAAAAVAGALFEVEEDAETVEDA------------EAHAIAAALGAVATLADAGGKDARPVVDDAFQLSVRCLARVGEYSGRPAAAAAKSALDVITVRLTRPDRPKGAAGVRGGGAAAGPAPEAGGAVVENDEGGGDTDKAVSGAPGDAKVEDAAEDVDTPMEILKDAGAILAVMKAHSTDARVQQSGWRSLIAMDTGRGDVEKFWTGVGDGPQSRRQMLRDCLERHGGDSLVAGQVADILEGLVLQGDSADGDGSSLTASLSDAPGEESPRLPSDHEEAEGGDEDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDNIKHSTDAAHQQEVEQVVNGEDEDKDGGLEVPGDKGDVPEDKGAEVEGGDEATAVAEASEGAGNADGGSDPLGDAEGKSETLLPEDV----------------------------------------------------LIEIGLIGTKTLEGGGSSGSSDSSRTASVVAAVAED--AVTGEGSTTRPNVARSLFGSNGHANDKNSAAGDTVEAEKPEAKADCSLNASV-----VVPSKEELKLRRS-WAKLETLHSDIVGRSQILGGESAPMVAAMAEPSVLKERVSALLEETESGDSRDAFAAASLALVGALTAATGALNNSQKEVQR 1016
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12584.1925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQK9_ECTSI6.000e-22147.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 882..898
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12584contigH-elongata_contig12584:194..5962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12584.1925.1mRNA_H-elongata_contig12584.1925.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12584 194..5962 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12584.1925.1 ID=prot_H-elongata_contig12584.1925.1|Name=mRNA_H-elongata_contig12584.1925.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=899bp
GDDAQTVECQVECARLLSSVAGRSATLLLSGGALGTLEDMIERLGAKHSS
MMRSCCEALERVSQTETGRRSLEERGTGGILLATIRDFPDALDEGSDPAL
APALKVVERIFTNKSSEACALSLRTHTEEESSDDPHRPTSSDYASCTETL
LAVAEATPEAPGSAAASCLWWLSGASDVAPGRALAAILLAAADENAEKYA
EEAEHRDSLGKDNEEKGTIDLLQWEIWSWFPRAIENDAITDPPTAPRPLE
AARFLAALCLCKPGLQSLEKRVRRDYPRAVGALVKLCRSEDPSLAGACLR
VVKGLARGGLGEKVFLEAGALKQATEAGTRFESADDATIVDDAATVDDAI
HAENARARAIAAALGVVASLVEAAGEDARPLVDEAFHLSVRCLRKIGEFS
GRPAAATAKSALDVITTRLSWSDRSKVLASSRCRISGAPSLMDGGSSFKK
TKEIGEVDDQLSSGTPNRLSVVGEVDEPMEVLGDASAILAAMKAHPMDLR
VQQSGWKSLIAMDTGRGYVETLLAPGGDGKRTRRQMLRDALERHGGDSLV
AGQVAEILEGLVLQGDSDGENSLTASMSDVHGDESLCSPTCDIESSGLGS
TEDAHPRESSVGEDVAVAGPEGDPEMSGRDVAADAVADDKPANGGGGGDG
VPVDDAGSDDEIAPEDVDGGDGDNNGMSAEGSKSGSEIAPEDVDGGDGDD
NGMPAEGSKSGGEIAPEEVWLRLNLEGQKALGSEGAESGELSEDGESTDG
NGSIVGTRIVRALFGEGVSDGGDHEVEYLIDTPRVRARAGRRAGASVLFY
PLVISSSRMVCFKRALWIELERLHKDVMGRSELLGGDSADMVAAMFDPDA
LKEKVRDLLAGARGRKAKDAIAASSVAMVDALTAATEALAASQKEVQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold