prot_H-elongata_contig125715.1920.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig125715.1920.1
Unique Nameprot_H-elongata_contig125715.1920.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length89
Homology
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BLAST of mRNA_H-elongata_contig125715.1920.1 vs. uniprot
Match: D7FTC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC7_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 6.560e-30
Identity = 61/84 (72.62%), Postives = 68/84 (80.95%), Query Frame = 0 
Query:    1 AISEENSPSSTPVFGLREEVRTNPEERADMTSTAMIRIDTLDRFSREHRVVGYALVAIFTDPFGNQPTISTARTISLREGNYQV 84
            AISE +SPS+ PVFGLR+E RT PE R DMTST MIR+DTLDRFS EHR VGYAL+AIF DP GNQPT ++A    LREGNYQV
Sbjct: 1291 AISEGDSPSNNPVFGLRQEYRTGPESRMDMTSTVMIRVDTLDRFSSEHRAVGYALLAIFMDPSGNQPTNASADGAFLREGNYQV 1374
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BLAST of mRNA_H-elongata_contig125715.1920.1 vs. uniprot
Match: A0A6H5K786_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K786_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 6.890e-18
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 0 
Query:   24 PEERADMTSTAMIRIDTLDRFSREHRVVGYALVAIFTDPFGNQPTISTARTISLREGNYQ 83
            P +R DMTST MIR++TLDRFS EHR VGYAL+AIF DP GNQPT ++A    LREGNYQ
Sbjct: 1071 PLQRMDMTSTVMIRVETLDRFSSEHRAVGYALLAIFMDPSGNQPTNASADGAFLREGNYQ 1130
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125715.1920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTC7_ECTSI6.560e-3072.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K786_9PHAE6.890e-1870.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig125715contigH-elongata_contig125715:440..1623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig125715.1920.1mRNA_H-elongata_contig125715.1920.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig125715 440..1623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig125715.1920.1 ID=prot_H-elongata_contig125715.1920.1|Name=mRNA_H-elongata_contig125715.1920.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=89bp
AISEENSPSSTPVFGLREEVRTNPEERADMTSTAMIRIDTLDRFSREHRV
VGYALVAIFTDPFGNQPTISTARTISLREGNYQVNQLL*
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