prot_H-elongata_contig125374.1901.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig125374.1901.1
Unique Name	prot_H-elongata_contig125374.1901.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	156

Homology

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: W7TSF6_9STRA (Ankyrin repeat family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF6_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.770e-19
Identity = 61/152 (40.13%), Postives = 89/152 (58.55%), Query Frame = 0

Query:    1 NFSVIAGVCT-LH-AIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSG-GATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSALGADVGMEEVMARGEVR 149
            + +  AG  T LH A  +    +++ L+  G + D  N QGL+P+I+AAA GCG  V  L + GAD G +LSG G T LH+ A+ G  + V+A LAT       A Q+++   P HLAA ++ +D+VE LLP+S +   V  EE+M+ G  R
Sbjct:  184 DVNAAAGTGTPLHWASAEGAKASLEALIETGGDVDAVNDQGLSPIILAAAHGCGGCVALLAKGGADVGFILSGAGLTALHMMAEYGSLDGVQAILATGAPGVACAVQESENGKPIHLAAWAAHKDVVETLLPYSDVKETV--EELMSWGRAR 333

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: D8LBH9_ECTSI (Putative ankyrin protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBH9_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 2.590e-17
Identity = 45/61 (73.77%), Postives = 51/61 (83.61%), Query Frame = 0

Query:   87 AVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSALGADVGMEEVMARGE 147
            AVEA LAT +GRKCAA  D+QG +PAHLAAMSSR D+VE LLPHS LG DVG+E VMARG+
Sbjct:  177 AVEAILATAVGRKCAALADSQGRVPAHLAAMSSRTDLVETLLPHSGLGPDVGLEVVMARGK 237

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A7S0SRZ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRZ6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 4.430e-12
Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = 0

Query:   31 NPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLP 129
            +P+  +  GL P+IMAA       V  L++A  + G +LSG  T+LHICA+ G++ AV   + +  G  CA  +   G LP HLAAMS   +I+E+L+P
Sbjct:  151 DPNELSGSGLPPVIMAAVAHSEECVCLLLEANVNVGFILSGNLTLLHICAENGMKNAVALIIKSIDGINCANLETIDGNLPIHLAAMSKYEEIIEILIP 249

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A836CAJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.230e-11
Identity = 41/83 (49.40%), Postives = 54/83 (65.06%), Query Frame = 0

Query:   69 LSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSALGADVG-----MEEVMARG 146
            +SGG TVLHICAD+G   AV+A LAT++GRKCAA ++  G+ P  LAAM   R +VE L P +   +  G     +EE+MA G
Sbjct:    1 MSGGLTVLHICADLGSAAAVDALLATDVGRKCAALRNDAGMRPIDLAAMGRHRALVEKLHPVTTSNSGGGGSGETVEELMAAG 83

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A7S2RLK0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK0_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.440e-10
Identity = 48/126 (38.10%), Postives = 62/126 (49.21%), Query Frame = 0

Query:   24 KLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSALGADV--GMEEVMARGE 147
            KL+SLG++ +  N QGLTP+I                                HICADM L E VEA L TE G+ CA  +DA+G LP  LAA +    IV LL PHS    D    +++V+A G+
Sbjct:  227 KLISLGADVEAVNDQGLTPIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHICADMELSEGVEALLETETGKTCAKLKDARGNLPMDLAAQAGAEAIVHLLHPHSFGDGDQVQPIQQVLATGK 352

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: F0WIY4_9STRA (Uncharacterized protein AlNc14C115G6520 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WIY4_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 4.190e-7
Identity = 46/122 (37.70%), Postives = 61/122 (50.00%), Query Frame = 0

Query:   11 LH-AIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLA--TEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLP 129
            LH A+ + R  T   LL  G+N + RN  G+TPLI+       +  V L++A  D    +  G T LHI A+MG  E V+A L+   E     A A+   G  P  LAA +    IVELL P
Sbjct:  165 LHMAVSEKREKTACFLLEKGANVNARNPDGVTPLILCCILNVPNIAVKLLEALCDITCTVMEGLTALHIAAEMGSEEIVQAILSIRAEEAIVVANARSKAGSTPLQLAAGAKHLKIVELLKP 286

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A1R3JNB7_9ROSI (Tetratricopeptide TPR-1 n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3JNB7_9ROSI)

HSP 1 Score: 55.8 bits (133), Expect = 3.560e-6
Identity = 44/124 (35.48%), Postives = 61/124 (49.19%), Query Frame = 0

Query:    6 AGVCTLHAIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLP 129
            AG   + A    +   V+ LL   +NP+   +  +TPL+ A A G  + +  LVQAGA   I  +GGAT LHI AD+G  E + + L          A D  G  P  +AA   +R  VE+L P
Sbjct:  154 AGTPLVWAAGHGQHDAVKVLLEHQANPNAETEDNITPLLSAVAAGSLACLDLLVQAGAKVNIT-AGGATPLHIAADIGNPELINSLLKAGADPN---AIDEDGQKPIQVAAGRGQRAAVEMLFP 273

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A5N6Q1A1_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q1A1_9ASTR)

HSP 1 Score: 55.8 bits (133), Expect = 3.630e-6
Identity = 42/127 (33.07%), Postives = 61/127 (48.03%), Query Frame = 0

Query:    6 AGVCTLHAIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSA 132
            +G   + A    +   ++ LL   ++P+     G+TPL+ A A G    +  LVQA A   I+ +GGAT LH+ AD+G  E +   L            D  GL P  +AA    R  VE+LLP S+
Sbjct:  154 SGTPLIWAAGHGQQDALKLLLKHNADPNIETDDGITPLLSAVAAGSLQCLELLVQACAKVNII-AGGATPLHVAADIGNSELIACLLKAGADPNMT---DEDGLKPVQVAAARGNRGAVEILLPLSS 276

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: A0A2I0ARY9_9ASPA (Putative E3 ubiquitin-protein ligase XBOS33 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ARY9_9ASPA)

HSP 1 Score: 55.1 bits (131), Expect = 6.280e-6
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0

Query:    6 AGVCTLHAIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELL 127
            AG   + A    + G+V+ LL   ++P+   + G+TPL+ A A G    +  L++AGA   I  +GGAT LH+ AD+G +E V   L          A D   L P  +AA    R  VE+L
Sbjct:  163 AGTPLIWAAGHGQQGSVKLLLEHDADPNAETEDGITPLLSAVAAGSLPCLELLIEAGASADIK-AGGATPLHVAADVGNKEIVNCLLKAGGDPN---AFDEDDLKPIQVAAARGNRVAVEIL 280

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BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Match: UPI001CB901C3 (putative ankyrin repeat protein RF_0381 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB901C3)

HSP 1 Score: 55.1 bits (131), Expect = 6.590e-6
Identity = 42/127 (33.07%), Postives = 61/127 (48.03%), Query Frame = 0

Query:    6 AGVCTLHAIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARGCGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKCAAAQDAQGLLPAHLAAMSSRRDIVELLLPHSA 132
            +G   + A    +   V+ LL   ++P+     G+TPL+   A G    +  LV+AGA   I+ +GGAT LHI AD+G  E +   L            D  G  P  +AA    R+ VE+LLP S+
Sbjct:  155 SGTPLIWAAGHGQQDAVKLLLEHKADPNIETDDGITPLLSTVAAGSLPCLELLVEAGAKVNII-AGGATPLHIAADIGNSELIMCLLKAGADPNMT---DEDGQKPVQVAAARGNRNAVEILLPLSS 277

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot

BLAST of mRNA_H-elongata_contig125374.1901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13


Match Name	E-value	Identity	Description
W7TSF6_9STRA	1.770e-19	40.13	Ankyrin repeat family protein n=2 Tax=Monodopsidac...	[more]
D8LBH9_ECTSI	2.590e-17	73.77	Putative ankyrin protein n=2 Tax=Ectocarpus TaxID=...	[more]
A0A7S0SRZ6_9STRA	4.430e-12	40.40	Hypothetical protein (Fragment) n=1 Tax=Chromulina...	[more]
A0A836CAJ6_9STRA	1.230e-11	49.40	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2RLK0_9STRA	1.440e-10	38.10	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
F0WIY4_9STRA	4.190e-7	37.70	Uncharacterized protein AlNc14C115G6520 n=1 Tax=Al...	[more]
A0A1R3JNB7_9ROSI	3.560e-6	35.48	Tetratricopeptide TPR-1 n=1 Tax=Corchorus olitoriu...	[more]
A0A5N6Q1A1_9ASTR	3.630e-6	33.07	Uncharacterized protein n=1 Tax=Mikania micrantha ...	[more]
A0A2I0ARY9_9ASPA	6.280e-6	34.43	Putative E3 ubiquitin-protein ligase XBOS33 n=1 Ta...	[more]
UPI001CB901C3	6.590e-6	33.07	putative ankyrin repeat protein RF_0381 n=1 Tax=Er...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 38..67 e-value: 1.2 score: 18.2 coord: 107..139 e-value: 8.7 score: 15.3
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 38..70 score: 8.523
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 9..145 e-value: 4.5E-23 score: 83.6
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 12..137
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 45..139 e-value: 4.5E-10 score: 40.0
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 13..132 score: 20.102
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 12..95
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..155

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig125374	contig	H-elongata_contig125374:1016..1762 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig125374.1901.1	mRNA_H-elongata_contig125374.1901.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig125374 1016..1762 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig125374.1901.1 ID=prot_H-elongata_contig125374.1901.1|Name=mRNA_H-elongata_contig125374.1901.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
NFSVIAGVCTLHAIPQARAGTVQKLLSLGSNPDPRNKQGLTPLIMAAARG
CGSAVVHLVQAGADPGIVLSGGATVLHICADMGLREAVEATLATEIGRKC
AAAQDAQGLLPAHLAAMSSRRDIVELLLPHSALGADVGMEEVMARGEVRK
LPRRG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom