prot_H-elongata_contig12531.1900.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12531.1900.1
Unique Nameprot_H-elongata_contig12531.1900.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length401
Homology
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BLAST of mRNA_H-elongata_contig12531.1900.1 vs. uniprot
Match: A0A6H5KU01_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU01_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 2.160e-118
Identity = 205/331 (61.93%), Postives = 243/331 (73.41%), Query Frame = 0 
Query:   77 LFEEAEDVVDYASLVVFASEQPAALRAASAVSRLRGHLLAVRKSKDVNLRATLEAFIVGDGEERGGGGGILRPAEFDITLRELGLEFTRDEKTALYKRLDPTG--TGINCHDLVAFIKDESNNRHG-------DMVLATVDEEVGLGKLLRRAQATIFEAAQRMDADFEGFDRPYLRYDWRQTGRVGTAEFIRSTIRCGFPFTRAQAAFLAGIFGDGSEVAYPKFLSWATPGPDGLAASGRQAGAVGALCGPLPWIERRRTASIGAGDRNRQQNFRDNAEEDLEDDEAELKIRTALHRMGKDGVSKAWREFERMDPEGRRGGVCKQELVEV 398
            +FEEAED+VDYASLV FA EQPAA RAAS VSRLR HLLAVR  + ++LRATLEAF V DG   GGG  +LR  + +  LRELG + T DEK+ALY RLD +G   GI C DLV F++  ++  +G        + +A+ DEE G+GKLLRRAQATI EAAQRMD+DFE FDRPYLRYDWR+TGRVGTA F+RST RCGFPFTRAQAAFLAG+FGDGS+V+YP FLSWATPGPDGLAASG      G              A++ A +  R  + R    +  E++EAELK+RTAL RMG+DGV++AW EFERMDP GRRGGV +QELVEV
Sbjct:    1 MFEEAEDMVDYASLVAFAKEQPAARRAASVVSRLRSHLLAVRNGEGLDLRATLEAFAVDDGG--GGGRRVLRQPQLESALRELGFKCTDDEKSALYNRLDLSGGNAGIVCTDLVGFVEGPADYDYGVVDTAIGAVTVASRDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLRYDWRRTGRVGTAAFVRSTARCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASGVGGDRRGTGESASRLQRHPGEAALSALEGGRSASRRGGVSD--EEEEAELKVRTALQRMGEDGVARAWEEFERMDPGGRRGGVQEQELVEV 327
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BLAST of mRNA_H-elongata_contig12531.1900.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.800e-109
Identity = 201/328 (61.28%), Postives = 242/328 (73.78%), Query Frame = 0 
Query:   84 VVDYASLVVFASEQPAALRAASAVSRLRGHLLAVRKSKDVNLRATLEAFIVGDGEERGGGGGILRPAEFDITLRELGLEFTRDEKTALYKRLDPTG--TGINCHDLVAFIKDESNNRHG-------DMVLATVDEEVGLGKLLRRAQATIFEAAQRMDADFEGFDRPYLRYDWRQTGRVGTAEFIRSTIRCGFPFTRAQAAFLAGIFGDGSEVAYPKFLSWATPGPDGLAASGRQAGAVGALCGPLPWIERRR----TASIGAGDRNRQQNFRDNAEEDLEDDEAELKIRTALHRMGKDGVSKAWREFERMDPEGRRGGVCKQELVEV 398
            +VDYASLV FA EQPAA RAA+ VSRLR HLLAVR  K ++LRATLEAF V DG   GGG  +LR  + +  LRELG + T DEK+ALY RLD +G   GI C DLVAF++  ++  +G        + +A+ DEE G+GKLLRRAQATI EAAQRMD+DFE FDRPYL YDWR+TGRVGTAEF+RST+RCGFPFTRAQAAFLAG+FGDGS+V+YP FLSWATPGPDGLAASG      G L G      R +     A++ A +  R  + R   ++  E++EAELK+RTAL RMG+DGV++AW EFERMDP  RRGGV ++ELVEV
Sbjct:    1 MVDYASLVAFAKEQPAARRAAAVVSRLRSHLLAVRNGKGLDLRATLEAFAVDDGG--GGGRRVLRQPQLEDALRELGFKCTEDEKSALYNRLDLSGGNAGIVCTDLVAFVEGPADYDNGVVDTAIGAVTVASRDEERGVGKLLRRAQATIVEAAQRMDSDFEAFDRPYLCYDWRRTGRVGTAEFVRSTVRCGFPFTRAQAAFLAGVFGDGSDVSYPTFLSWATPGPDGLAASG----VGGDLRGTGESASRLQRHPGAAALSALEGGRSASRRGGVKD--EEEEAELKVRTALQRMGEDGVARAWEEFERMDPGRRRGGVQEEELVEV 320
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12531.1900.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU01_9PHAE2.160e-11861.93EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LSF6_ECTSI1.800e-10961.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 336..356
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 143..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12531contigH-elongata_contig12531:3818..6520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12531.1900.1mRNA_H-elongata_contig12531.1900.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12531 3818..6520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12531.1900.1 ID=prot_H-elongata_contig12531.1900.1|Name=mRNA_H-elongata_contig12531.1900.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=401bp
AFTIFCEERRPPDVSPAVVLLRSTVLHPGAVDVFARQDPLGKGYICRVDL
FDGLRELGITGTPPLQARKSLRNLALLFEEAEDVVDYASLVVFASEQPAA
LRAASAVSRLRGHLLAVRKSKDVNLRATLEAFIVGDGEERGGGGGILRPA
EFDITLRELGLEFTRDEKTALYKRLDPTGTGINCHDLVAFIKDESNNRHG
DMVLATVDEEVGLGKLLRRAQATIFEAAQRMDADFEGFDRPYLRYDWRQT
GRVGTAEFIRSTIRCGFPFTRAQAAFLAGIFGDGSEVAYPKFLSWATPGP
DGLAASGRQAGAVGALCGPLPWIERRRTASIGAGDRNRQQNFRDNAEEDL
EDDEAELKIRTALHRMGKDGVSKAWREFERMDPEGRRGGVCKQELVEVRG
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair