mRNA_H-elongata_contig12524.1896.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12524.1896.1
Unique NamemRNA_H-elongata_contig12524.1896.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: D7FVQ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVQ1_ECTSI)

HSP 1 Score: 441 bits (1135), Expect = 1.220e-142
Identity = 267/553 (48.28%), Postives = 348/553 (62.93%), Query Frame = 1 
Query:    1 QIMEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMINDGHAILRTAESMVKELLAGMELGPKE-----------------NNDDVSGADSVSGRMS----SKPGIRSRSEHDGKEDYQNVPAVQQ-----PDER----WAAPRPSD--STLIYPK---------------TVNSLGEGESVRSVEVAPLQDGSCLHSQD----------NLLGTCLSRVQDTHRKACRRYSSLVAEIKARNATLTAKLSEATRVGDNSMLRAAEWETQHRALEERLATVEKALRADVDDSTERAERESARARNASDALKSILERATPMLLSMVSTIVPRDTEELGAELFRALDIKPEVYAHIIATKRMFQ----------ADLESRAFEILAAERERTTAE 1458
            QIM  IR GGR V ++F+DVL+  WEGLL+EYLR+VGCPLR  E DPR FV++YWRRS+LDPSVR  FVPFY +REVK R+S++ E++DIR+IRAGL  RE +VK+ E + REQHDYRFVL+YF ASR+LHRTLVANVNYLANEVEQLRAN+DHS ESI++ME Q VELETKYD+VVGGLVHRGAFQ TLE  LYGMI +GH  L++A  M +E+L GM+ GP+                  N D  S   +  G  S    S  G+ + ++ +G++  +   A        P+E     WAAPRP    ST I  +               T   LGEGE     +    +  +  H  D          N+LG CL +  +THR+AC RYS+ VA+++ +NA LTA+ + A ++ + +   A   E +H ALE+RLA VE+  R D+  + ERA++   R     +     LERATP LL M++   PR+TEELGA L  +LDI+P++YAHI+ATKRMF+          AD+ESRAFE+L AER+   AE
Sbjct:   81 QIMNYIREGGRHVGKRFADVLKFCWEGLLFEYLRTVGCPLRDREHDPRHFVMRYWRRSMLDPSVRPGFVPFYAKREVKKRNSLMQEERDIRNIRAGLALREDVVKDAENKTREQHDYRFVLQYFSASRDLHRTLVANVNYLANEVEQLRANMDHSSESISIMEQQFVELETKYDQVVGGLVHRGAFQLTLEGTLYGMIKEGHVALKSAAVMAREVLDGMDTGPERFDGVDPEVVNGCSANESNGDGYSPCPTQRGFGSAAGGSDLGLAAANQTEGRKRLEESKAGASGAEVDPEENGKQTWAAPRPQGGGSTRIDSRRTGGNNSQERRQTVLTEMKLGEGEEEGVSQTRTDKGATWGHGHDDGSGRRRNLLNVLGPCLGKTLETHRRACTRYSNQVADLEGQNAALTARAAAACKLAEEATTEAKLLEAKHCALEQRLAEVEERSRQDLACAEERADKACLRTLEVVELQTEKLERATPTLLDMLTRFAPRETEELGAYLLHSLDIEPDLYAHIVATKRMFELQEVLAFTTKADMESRAFEMLEAERKIALAE 633
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A836CGG2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGG2_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.040e-30
Identity = 70/132 (53.03%), Postives = 90/132 (68.18%), Query Frame = 1 
Query:    4 IMEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPE-DKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHR 396
            +M  IR G  Q +++F++VLR  WEGLL+EYLRSVGCP+  +E DPR +VLKYWRRS  DP    SFVP+YL+R V  R+   PE D D+ ++RA +M  E  VKE E  VR   DYR +L YF A+ +LHR
Sbjct:   85 VMHYIREGRHQAEQRFAEVLRFVWEGLLFEYLRSVGCPVFTAERDPRIYVLKYWRRSTTDPRGAASFVPYYLERRVYARADGQPEEDPDVGEVRARIMGAEVAVKEAEALVRASRDYRHILTYFSATADLHR 216
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A7S1XJ94_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ94_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.870e-23
Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 1 
Query:   19 RSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREVK--HRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETK 516
            +  G  V+R + +VL++ WEG+L+EYLRSVG PL  + LDPR FV +YW++   DP  R  FVP+Y  REV+  H +    +D D+  +   + T+E  VK+ E  +R++ DYR +L +  A +EL     ++ +YL  +VE+LR+   H   S  +ME Q  ELE +
Sbjct:   99 KENGTHVERNYHEVLKVVWEGVLFEYLRSVGQPLHSNHLDPRTFVARYWKKRATDPKNRL-FVPYYTGREVRNCHENGDYKDD-DLEMVLDDVETKEITVKKMETIMRKERDYRHILNFLNAVKELRDAEKSHRDYLILQVEKLRSVHGHWISSQKIMEEQTEELEQR 264
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: F0YAF5_AURAN (WW domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAF5_AURAN)

HSP 1 Score: 110 bits (274), Expect = 3.740e-21
Identity = 60/169 (35.50%), Postives = 92/169 (54.44%), Query Frame = 1 
Query:   40 QRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWR-RSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLV 543
            ++   D L + W+G+L+EYLR+ G PLR + +DPR F L+ WR R+  +      F P Y+ R ++ R    P   D+  I  G+  +E  VK  E ++R++ DYR V+R+   +  LH       +YL +E+E  R  +DH   S+ M   QL ELE K++R    LV
Sbjct:  100 EKAHMDCLAMMWDGILFEYLRAEGMPLRSARIDPRVFTLQLWRKRAAFNSGGNVVFRPHYVPRHIRRRGKGAPRAADLEGILRGVEAKELAVKHVENKIRKESDYRNVIRFLADTTSLHEFERDARDYLMHELEAARDRIDHYNMSLEMTAEQLGELELKHERCAEVLV 268
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A8J2WS82_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WS82_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.900e-19
Identity = 63/183 (34.43%), Postives = 96/183 (52.46%), Query Frame = 1 
Query:    4 IMEVIRSGGR--QVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQS-FVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLV 543
            + +V ++G R    +R   + L   W+G+LYEYLR+ G PLR + +DPR F L+ WRR        Q  F P Y+ R V+ R    P   D+  +  G+  +E  +K  E++VR++ DYR V+R+   +  LH       +YL +E+E  R  +DH   S+ M   QL E E  ++R    LV
Sbjct:  167 LRKVAQTGARYNSTERAHMECLETMWDGILYEYLRAEGQPLRSARVDPRVFTLQMWRRRAAFSQGGQGIFRPHYVPRMVRMRDQKPPRAADLEGLLRGVEAKELALKHIERKVRKESDYRNVIRFLADTTSLHEFERDARDYLMHELESCRDRIDHYQASLEMTGEQLGEAELVHERATTTLV 349
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A812VQK1_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VQK1_SYMMI)

HSP 1 Score: 86.3 bits (212), Expect = 4.410e-14
Identity = 56/174 (32.18%), Postives = 84/174 (48.28%), Query Frame = 1 
Query:    4 IMEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVLKYWRRSVLDPSVRQSFVPFYLQREV--KHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKY 519
            I++  +  G     K    +   WEG L+EYL+S+G        DP+  V+K WRR     S + +F P Y+QR V  +H S +    +DI    A L T E  +K  E+++ E+HDY   L +F    ++ R      +YL N++E  RA L     +  M    L E ET+Y
Sbjct:   74 IIQFCKDDGDFQDVKVMKAVNNMWEGALFEYLKSIGQGFNTCLPDPKQAVMKIWRRGGFHESNKDTFTPHYIQRRVLTRHDSEL---SEDIASRAATLKTIENSLKHVERELFEEHDYTNALMFFQKIGDVRRLETEFRDYLINKLELARAELSREKSNQEMAASMLAESETRY 244
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BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Match: A0A7S4DIU4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIU4_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 4.410e-13
Identity = 46/126 (36.51%), Postives = 71/126 (56.35%), Query Frame = 1 
Query:  217 LQREVKHRSSIIPEDKDIRDIRAGLMTRERMVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANLDHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMI 594
            L R+ + RS     D+DI  I   +  +E  VK+ EQ +R ++DYRFVLRYF A  ELH      ++++  E E LRA ++H  ++ ++   QL ELE +++ +    V RGAF+  L   L G +
Sbjct:    1 LPRKFEVRSGRPRHDRDIGKIVEEIAGKEIAVKQAEQCLRRENDYRFVLRYFTAVNELHDAQKRGMDFMTAEAEMLRARMEHCEQNFSVTAEQLEELEYRHEVLKDRFVARGAFEGALADTLVGTL 126
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12524.1896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FVQ1_ECTSI1.220e-14248.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGG2_9STRA3.040e-3053.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1XJ94_9STRA1.870e-2339.29Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0YAF5_AURAN3.740e-2135.50WW domain-containing protein n=1 Tax=Aureococcus a... [more]
A0A8J2WS82_9STRA1.900e-1934.43Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A812VQK1_SYMMI4.410e-1432.18Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A7S4DIU4_HETAK4.410e-1336.51Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12524contigH-elongata_contig12524:102..3060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.8
Seed ortholog evalue1.5e-22
Seed eggNOG ortholog44056.XP_009037371.1
KEGG koko:K19612
EggNOG free text desc.Endonuclease/Exonuclease/phosphatase family
EggNOG OGsCOG5239@1,KOG0620@2759
EC3.1.13.4
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_005930.1
Exons4
Model size1860
Cds size1854
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12524.1896.1prot_H-elongata_contig12524.1896.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12524 108..3060 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929740.1710162-UTR-H-elongata_contig12524:101..1071622929740.1710162-UTR-H-elongata_contig12524:101..107Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12524 102..107 +
1691679139.4436314-UTR-H-elongata_contig12524:101..1071691679139.4436314-UTR-H-elongata_contig12524:101..107Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12524 102..107 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929740.193717-CDS-H-elongata_contig12524:107..3291622929740.193717-CDS-H-elongata_contig12524:107..329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 108..329 +
1691679139.4551508-CDS-H-elongata_contig12524:107..3291691679139.4551508-CDS-H-elongata_contig12524:107..329Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 108..329 +
1622929740.213016-CDS-H-elongata_contig12524:610..8921622929740.213016-CDS-H-elongata_contig12524:610..892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 611..892 +
1691679139.4720993-CDS-H-elongata_contig12524:610..8921691679139.4720993-CDS-H-elongata_contig12524:610..892Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 611..892 +
1622929740.2372048-CDS-H-elongata_contig12524:1261..21461622929740.2372048-CDS-H-elongata_contig12524:1261..2146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 1262..2146 +
1691679139.4860878-CDS-H-elongata_contig12524:1261..21461691679139.4860878-CDS-H-elongata_contig12524:1261..2146Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 1262..2146 +
1622929740.255702-CDS-H-elongata_contig12524:2595..30601622929740.255702-CDS-H-elongata_contig12524:2595..3060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 2596..3060 +
1691679139.497119-CDS-H-elongata_contig12524:2595..30601691679139.497119-CDS-H-elongata_contig12524:2595..3060Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12524 2596..3060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12524.1896.1

>prot_H-elongata_contig12524.1896.1 ID=prot_H-elongata_contig12524.1896.1|Name=mRNA_H-elongata_contig12524.1896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=618bp
MEVIRSGGRQVQRKFSDVLRLFWEGLLYEYLRSVGCPLRQSELDPRDFVL
KYWRRSVLDPSVRQSFVPFYLQREVKHRSSIIPEDKDIRDIRAGLMTRER
MVKETEQQVREQHDYRFVLRYFCASRELHRTLVANVNYLANEVEQLRANL
DHSGESITMMEHQLVELETKYDRVVGGLVHRGAFQQTLESALYGMINDGH
AILRTAESMVKELLAGMELGPKENNDDVSGADSVSGRMSSKPGIRSRSEH
DGKEDYQNVPAVQQPDERWAAPRPSDSTLIYPKTVNSLGEGESVRSVEVA
PLQDGSCLHSQDNLLGTCLSRVQDTHRKACRRYSSLVAEIKARNATLTAK
LSEATRVGDNSMLRAAEWETQHRALEERLATVEKALRADVDDSTERAERE
SARARNASDALKSILERATPMLLSMVSTIVPRDTEELGAELFRALDIKPE
VYAHIIATKRMFQADLESRAFEILAAERERTTAEMESVGQEHEQAVGTKK
RGRGRPKSRGKAVRQVTKKGKEASKSRSKSNPAEDAKAATNTEMDGKAGG
GGQNKSEGNGESISRQGETEYSPARGEGKRSRRTAGKGASNPGRAKAQRV
PSPAGKRNAKENKKSKS*
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mRNA from alignment at H-elongata_contig12524:102..3060+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12524.1896.1 ID=mRNA_H-elongata_contig12524.1896.1|Name=mRNA_H-elongata_contig12524.1896.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2959bp|location=Sequence derived from alignment at H-elongata_contig12524:102..3060+ (Himanthalia elongata Himel1 dioecious)
CAGATCATGGAGGTTATAAGAAGCGGCGGCAGACAGGTTCAACGAAAGTT
TTCGGATGTCCTGCGGTTGTTTTGGGAAGGGTTGCTGTATGAGTACCTAC
GATCGGTGGGATGTCCGCTTCGTCAGTCGGAGCTCGACCCTCGAGACTTC
GTGCTGAAGTATTGGCGAAGGAGCGTACTTGACCCGAGCGTTCGACAGAG
CTTCGTTCCTTTCTATCTACAGAGGGAGGTATGAAGCAGCATCGACGTTC
CCAGTCCTTGCGTAGAGCTATGTAGGATTATGGATTCCTGTTCTATAGTC
TGTAGGATGGAGAACATAAAAAGGATGACTGCCTTCGACGACGGAGCGAT
GGCGTCAGAAGTACTAGGTCACGTTAGGGGGACAATATTTATGTATATAG
ACCACGATTTGAATAATTAAGAGCGAGATTCCCATCGGACTCCACGGCTC
AAACGATGTGTATCTGTATTAGACACACAGAAGCCATTTATACGTCATTC
ATCATACAGGTAAAACACCGGAGTAGCATAATCCCGGAAGACAAAGACAT
ACGAGATATCCGTGCGGGTCTAATGACCCGTGAGAGGATGGTTAAGGAAA
CCGAGCAGCAGGTCAGGGAGCAGCACGACTACCGATTCGTCCTGCGCTAC
TTTTGCGCCTCTAGGGAACTTCATCGCACGTTGGTTGCGAATGTTAATTA
CCTGGCGAACGAAGTGGAGCAGCTGCGAGCAAACCTTGATCACAGCGGTG
AGAGCATCACCATGATGGAACATCAGCTCGTAGAACTGGAGGTGAGAGCT
CATGCTGCTTACAGAATCAAGTAACTCGTAAGCTTTGGCTAGATGCGCTT
TGCTAGGCCCGCCGTTGTCGAGGTTGTGCCACCGCGGCTTCACATGCTTC
GGGGTGGCTAAAAATAGTTTGCCGTGACGTTCCCTTCTAGGCTAGTATCG
CGATCCAAACAAATGTTCCCGTCCTGCGCGCTGTGTGCGTTTTCGCGTTG
CCCATTGCCTAGTCCTCCGCACATAATTGCGAGAGCCACACCCTACAGCA
GTCGGGCGCGCTGTTCGTATTTTAAACGCACTTTGGGATAGCAAGCAGAC
AAACCTAGGAAAATTACCTGTGCCATTCTAACCCTTAGTGTCCCGTTGTA
TCAAGGGCAGACGAAATATGATCGAGTTGTCGGAGGCTTGGTCCATCGAG
GCGCCTTCCAGCAGACGTTGGAGAGCGCCCTTTATGGCATGATCAACGAC
GGGCACGCGATCCTTAGAACCGCGGAGAGCATGGTGAAAGAACTCCTTGC
GGGCATGGAACTCGGTCCGAAGGAAAATAATGATGACGTCTCTGGGGCCG
ACAGTGTCAGCGGCAGAATGAGTTCGAAACCTGGCATCAGATCAAGGTCG
GAACACGACGGTAAGGAGGATTATCAAAACGTTCCCGCCGTACAACAACC
GGATGAAAGGTGGGCAGCCCCTCGACCTAGCGACTCAACATTGATCTACC
CCAAGACCGTGAACTCATTAGGAGAGGGCGAATCCGTGCGATCGGTGGAG
GTGGCCCCCTTGCAAGATGGAAGCTGTCTCCACAGCCAAGACAATCTCTT
GGGAACTTGTCTTTCACGGGTGCAAGATACTCACCGGAAGGCCTGCAGGA
GGTACTCTAGCCTCGTGGCAGAGATCAAAGCCAGAAATGCCACTCTGACG
GCTAAGCTGTCAGAGGCGACCAGAGTCGGGGATAATTCCATGCTGCGGGC
GGCTGAGTGGGAGACTCAACATAGAGCTCTCGAGGAACGTCTGGCAACTG
TTGAAAAAGCCTTACGAGCAGATGTCGATGACAGCACCGAACGCGCAGAG
CGAGAGAGCGCCCGCGCAAGAAATGCATCGGATGCGCTGAAAAGTATACT
CGAGAGGGCGACGCCGATGTTGCTCAGTATGGTGTCAACGATCGTTCCCA
GGGACACGGAGGAGCTCGGCGCGGAATTGTTCCGCGCGTTGGACATCAAG
CCCGAAGTATATGCGCATATTATTGCAACAAAGCGGATGTTCCAGGTGTT
GTGCGCATGCTTAAAATACGACCAAACTAAAATACTCATAGTTGTACCAC
ACCGCATCCACCCCCCTCTTATTTCGCGCATTCCTCGTGTGCGTAGATTG
TGCGCAGGTATTTTTAATTTCGACCTTCGCCGCTAAGGGCGGGTATTAAC
GGGGTTACAAAAAAAAAAAAATCCCGCTGATTTAAACATAAATCGGCTGG
AATTTCAATTTTTGTAACCCCGTTAATACCCGCCCTAAGTGGCGTTGTAC
GATGCTCGAACGGTTGGCTTTACCATCTTCTACGCTTGCAAGCGGGCCTG
GAAACCCGTGATGAGCGTACATTGTACCGGGTCGTCCATAGGTTGAGAGT
ACATCAACGGCACAACCCGAGGGGGTTTGCCACAGGGCGACCAAAAGAGG
ACCTGAAAATCAACGCTTATTATCTCTGCCCGCGTACGCTTCAGGCCGAT
CTGGAATCTCGCGCCTTCGAGATCTTGGCTGCCGAACGGGAGCGTACTAC
CGCGGAGATGGAAAGCGTCGGACAGGAACATGAACAGGCAGTAGGCACCA
AGAAGAGGGGCCGGGGGCGCCCGAAGTCGAGAGGTAAGGCAGTGAGGCAA
GTCACGAAGAAGGGCAAGGAGGCAAGCAAATCGAGGAGCAAATCGAATCC
CGCAGAGGACGCAAAAGCGGCGACAAACACCGAAATGGATGGCAAGGCCG
GTGGGGGCGGTCAAAATAAGTCTGAAGGGAACGGGGAGTCGATATCTCGT
CAGGGGGAAACTGAATATTCCCCCGCTCGAGGGGAGGGAAAGCGTAGCAG
AAGAACTGCCGGTAAGGGCGCTTCAAACCCAGGCAGGGCGAAGGCGCAAC
GTGTGCCAAGTCCTGCAGGAAAGAGAAACGCCAAGGAAAACAAAAAGAGC
AAATCTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig12524:102..3060+

>mRNA_H-elongata_contig12524.1896.1 ID=mRNA_H-elongata_contig12524.1896.1|Name=mRNA_H-elongata_contig12524.1896.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3708bp|location=Sequence derived from alignment at H-elongata_contig12524:102..3060+ (Himanthalia elongata Himel1 dioecious)
ATGGAGGTTATAAGAAGCGGCGGCAGACAGGTTCAACGAAAGTTTTCGGA
TGTCCTGCGGTTGTTTTGGGAAGGGTTGCTGTATGAGTACCTACGATCGG
TGGGATGTCCGCTTCGTCAGTCGGAGCTCGACCCTCGAGACTTCGTGCTG
AAGTATTGGCGAAGGAGCGTACTTGACCCGAGCGTTCGACAGAGCTTCGT
TCCTTTCTATCTACAGAGGGAGATGGAGGTTATAAGAAGCGGCGGCAGAC
AGGTTCAACGAAAGTTTTCGGATGTCCTGCGGTTGTTTTGGGAAGGGTTG
CTGTATGAGTACCTACGATCGGTGGGATGTCCGCTTCGTCAGTCGGAGCT
CGACCCTCGAGACTTCGTGCTGAAGTATTGGCGAAGGAGCGTACTTGACC
CGAGCGTTCGACAGAGCTTCGTTCCTTTCTATCTACAGAGGGAGGTAAAA
CACCGGAGTAGCATAATCCCGGAAGACAAAGACATACGAGATATCCGTGC
GGGTCTAATGACCCGTGAGAGGATGGTTAAGGAAACCGAGCAGCAGGTCA
GGGAGCAGCACGACTACCGATTCGTCCTGCGCTACTTTTGCGCCTCTAGG
GAACTTCATCGCACGTTGGTTGCGAATGTTAATTACCTGGCGAACGAAGT
GGAGCAGCTGCGAGCAAACCTTGATCACAGCGGTGAGAGCATCACCATGA
TGGAACATCAGCTCGTAGAACTGGAGGTAAAACACCGGAGTAGCATAATC
CCGGAAGACAAAGACATACGAGATATCCGTGCGGGTCTAATGACCCGTGA
GAGGATGGTTAAGGAAACCGAGCAGCAGGTCAGGGAGCAGCACGACTACC
GATTCGTCCTGCGCTACTTTTGCGCCTCTAGGGAACTTCATCGCACGTTG
GTTGCGAATGTTAATTACCTGGCGAACGAAGTGGAGCAGCTGCGAGCAAA
CCTTGATCACAGCGGTGAGAGCATCACCATGATGGAACATCAGCTCGTAG
AACTGGAGACGAAATATGATCGAGTTGTCGGAGGCTTGGTCCATCGAGGC
GCCTTCCAGCAGACGTTGGAGAGCGCCCTTTATGGCATGATCAACGACGG
GCACGCGATCCTTAGAACCGCGGAGAGCATGGTGAAAGAACTCCTTGCGG
GCATGGAACTCGGTCCGAAGGAAAATAATGATGACGTCTCTGGGGCCGAC
AGTGTCAGCGGCAGAATGAGTTCGAAACCTGGCATCAGATCAAGGTCGGA
ACACGACGGTAAGGAGGATTATCAAAACGTTCCCGCCGTACAACAACCGG
ATGAAAGGTGGGCAGCCCCTCGACCTAGCGACTCAACATTGATCTACCCC
AAGACCGTGAACTCATTAGGAGAGGGCGAATCCGTGCGATCGGTGGAGGT
GGCCCCCTTGCAAGATGGAAGCTGTCTCCACAGCCAAGACAATCTCTTGG
GAACTTGTCTTTCACGGGTGCAAGATACTCACCGGAAGGCCTGCAGGAGG
TACTCTAGCCTCGTGGCAGAGATCAAAGCCAGAAATGCCACTCTGACGGC
TAAGCTGTCAGAGGCGACCAGAGTCGGGGATAATTCCATGCTGCGGGCGG
CTGAGTGGGAGACTCAACATAGAGCTCTCGAGGAACGTCTGGCAACTGTT
GAAAAAGCCTTACGAGCAGATGTCGATGACAGCACCGAACGCGCAGAGCG
AGAGAGCGCCCGCGCAAGAAATGCATCGGATGCGCTGAAAAGTATACTCG
AGAGGGCGACGCCGATGTTGCTCAGTATGGTGTCAACGATCGTTCCCAGG
GACACGGAGGAGCTCGGCGCGGAATTGTTCCGCGCGTTGGACATCAAGCC
CGAAGTATATGCGCATATTATTGCAACAAAGCGGATGTTCCAGACGAAAT
ATGATCGAGTTGTCGGAGGCTTGGTCCATCGAGGCGCCTTCCAGCAGACG
TTGGAGAGCGCCCTTTATGGCATGATCAACGACGGGCACGCGATCCTTAG
AACCGCGGAGAGCATGGTGAAAGAACTCCTTGCGGGCATGGAACTCGGTC
CGAAGGAAAATAATGATGACGTCTCTGGGGCCGACAGTGTCAGCGGCAGA
ATGAGTTCGAAACCTGGCATCAGATCAAGGTCGGAACACGACGGTAAGGA
GGATTATCAAAACGTTCCCGCCGTACAACAACCGGATGAAAGGTGGGCAG
CCCCTCGACCTAGCGACTCAACATTGATCTACCCCAAGACCGTGAACTCA
TTAGGAGAGGGCGAATCCGTGCGATCGGTGGAGGTGGCCCCCTTGCAAGA
TGGAAGCTGTCTCCACAGCCAAGACAATCTCTTGGGAACTTGTCTTTCAC
GGGTGCAAGATACTCACCGGAAGGCCTGCAGGAGGTACTCTAGCCTCGTG
GCAGAGATCAAAGCCAGAAATGCCACTCTGACGGCTAAGCTGTCAGAGGC
GACCAGAGTCGGGGATAATTCCATGCTGCGGGCGGCTGAGTGGGAGACTC
AACATAGAGCTCTCGAGGAACGTCTGGCAACTGTTGAAAAAGCCTTACGA
GCAGATGTCGATGACAGCACCGAACGCGCAGAGCGAGAGAGCGCCCGCGC
AAGAAATGCATCGGATGCGCTGAAAAGTATACTCGAGAGGGCGACGCCGA
TGTTGCTCAGTATGGTGTCAACGATCGTTCCCAGGGACACGGAGGAGCTC
GGCGCGGAATTGTTCCGCGCGTTGGACATCAAGCCCGAAGTATATGCGCA
TATTATTGCAACAAAGCGGATGTTCCAGGCCGATCTGGAATCTCGCGCCT
TCGAGATCTTGGCTGCCGAACGGGAGCGTACTACCGCGGAGATGGAAAGC
GTCGGACAGGAACATGAACAGGCAGTAGGCACCAAGAAGAGGGGCCGGGG
GCGCCCGAAGTCGAGAGGTAAGGCAGTGAGGCAAGTCACGAAGAAGGGCA
AGGAGGCAAGCAAATCGAGGAGCAAATCGAATCCCGCAGAGGACGCAAAA
GCGGCGACAAACACCGAAATGGATGGCAAGGCCGGTGGGGGCGGTCAAAA
TAAGTCTGAAGGGAACGGGGAGTCGATATCTCGTCAGGGGGAAACTGAAT
ATTCCCCCGCTCGAGGGGAGGGAAAGCGTAGCAGAAGAACTGCCGGTAAG
GGCGCTTCAAACCCAGGCAGGGCGAAGGCGCAACGTGTGCCAAGTCCTGC
AGGAAAGAGAAACGCCAAGGAAAACAAAAAGAGCAAATCTTGAGCCGATC
TGGAATCTCGCGCCTTCGAGATCTTGGCTGCCGAACGGGAGCGTACTACC
GCGGAGATGGAAAGCGTCGGACAGGAACATGAACAGGCAGTAGGCACCAA
GAAGAGGGGCCGGGGGCGCCCGAAGTCGAGAGGTAAGGCAGTGAGGCAAG
TCACGAAGAAGGGCAAGGAGGCAAGCAAATCGAGGAGCAAATCGAATCCC
GCAGAGGACGCAAAAGCGGCGACAAACACCGAAATGGATGGCAAGGCCGG
TGGGGGCGGTCAAAATAAGTCTGAAGGGAACGGGGAGTCGATATCTCGTC
AGGGGGAAACTGAATATTCCCCCGCTCGAGGGGAGGGAAAGCGTAGCAGA
AGAACTGCCGGTAAGGGCGCTTCAAACCCAGGCAGGGCGAAGGCGCAACG
TGTGCCAAGTCCTGCAGGAAAGAGAAACGCCAAGGAAAACAAAAAGAGCA
AATCTTGA
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