prot_H-elongata_contig12522.1895.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12522.1895.1
Unique Nameprot_H-elongata_contig12522.1895.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length122
Homology
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A6H5L2V5_9PHAE (Beta_elim_lyase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2V5_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.120e-49
Identity = 83/121 (68.60%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 121
            MGNLI VGA C+RGDE+ILG KSHIF+YEG GASA MGV+YHT+ N EDG L++  I +A+RGDD HYPRS+LLCLENTQNLCGARAI   RM EMCAA R  G+KVHVDG R     V++
Sbjct:  213 MGNLIAVGAHCRRGDELILGDKSHIFQYEGAGASALMGVSYHTVRNAEDGGLEVADIETAVRGDDPHYPRSSLLCLENTQNLCGARAIAPARMAEMCAAGRHAGLKVHVDGARLWNAAVSL 333          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A8K1FA57_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA57_PYTOL)

HSP 1 Score: 135 bits (341), Expect = 1.660e-36
Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 121
            MGNLI +GA C+RGDEIILG KSHIF YEG GASA+MGV++HTL N  +G+L +  + +A+R DDQHYPR+ L+ LENT N CG R + V  + E+ A  R+  +++H+DG R     V +
Sbjct:   45 MGNLIAIGAHCRRGDEIILGNKSHIFMYEGGGASAYMGVSFHTLPNQANGTLRLDDLKNAVRDDDQHYPRTRLVALENTHNTCGGRVLSVDYVNEVAAFCRQQKLQLHIDGARLANASVAL 165          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A2D4C5R1_PYTIN (L-allo-threonine aldolase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5R1_PYTIN)

HSP 1 Score: 133 bits (335), Expect = 1.650e-35
Identity = 63/121 (52.07%), Postives = 86/121 (71.07%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 121
            MGNLI VG  C+RGDEIILG KSHIF YEG GASA+MGV +H++ N  DG+L +  +A+A+R DD HYPR+ L+ LENT N CG R + ++ + ++ A  R+ G+++HVDG R     V +
Sbjct:   57 MGNLIAVGVHCRRGDEIILGDKSHIFMYEGAGASAYMGVGFHSVRNQSDGTLALEDLANAVRADDPHYPRTRLVALENTHNTCGGRVLPLEFLEQVEAFCRQRGLRLHVDGARLANASVAL 177          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A6G0XNI5_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNI5_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.770e-35
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            MGNLI VG  C RGDE+ILG KSH+F+YEG GASAF+GV+ HT+ N  DGSL +  I +A+R DD H+PRS L+ +ENT N CG R +  + ++ + A   R G+K+HVDG R
Sbjct:   65 MGNLISVGVHCNRGDEVILGNKSHVFKYEGGGASAFLGVSMHTVPNQADGSLLLEDIEAAIREDDPHFPRSQLVVIENTHNTCGGRVVPTETVQSISALCERRGLKLHVDGAR 177          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A0P1AV90_PLAHL (L-allo-threonine aldolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AV90_PLAHL)

HSP 1 Score: 125 bits (315), Expect = 4.620e-34
Identity = 57/113 (50.44%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            M NLI +G  C+RG+EII G K+HIF YEG GASA+MGV+ HT++N  DG+LDI  + +A+R DD HYPR++L+ +ENTQN CG R +  + +R +     +  +++HVDG R
Sbjct:   67 MSNLIAIGTHCRRGEEIICGDKAHIFLYEGAGASAYMGVSLHTVENQRDGTLDIKDVQNAIRADDPHYPRTSLVTIENTQNTCGGRVLPQQFVRTLEQLCHKRNLRLHVDGAR 179          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A485LPZ3_9STRA (Aste57867_24183 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPZ3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.700e-32
Identity = 58/113 (51.33%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            MGNLI VG  C RGDE+ILG KSH+F+YEG G SA+MGV  HT+ N  +G++ +  I SA+RGDD HYPRS L+ +ENT N CG R +  + +  +        +K+HVDG R
Sbjct:   65 MGNLIAVGVHCNRGDEVILGNKSHVFKYEGAGVSAYMGVGMHTVPNQTNGTMFVPDIQSAIRGDDPHYPRSRLVIVENTHNTCGGRVVPTETVASIADICDAHDLKLHVDGAR 177          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A5D6XWH6_9STRA (Beta_elim_lyase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWH6_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.520e-32
Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            M NLI +GA C RGDEII+G K+HIF YEG GASA++GV  HT+ N  DG+L +  I SA+R DD HYPR+ L+ +ENT N CG R + +  +RE+    R   +K+HVDG R
Sbjct:   67 MSNLIALGAHCNRGDEIIVGDKAHIFMYEGAGASAYLGVGLHTVRNQADGTLALADIRSAVRADDPHYPRTRLVAIENTHNTCGGRVLPLAFVREVEGFCRDASLKLHVDGAR 179          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A1V9ZG07_9STRA (L-allo-threonine aldolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZG07_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.540e-32
Identity = 56/113 (49.56%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            M NLI VGA CQRGDEI+LG+KSHIF YEG G SA++GV  +T+    +GSL +  + SA+R DD HYPR+ L+ +ENT N CG R +  + +R++ +      +K+H+DG R
Sbjct:   65 MSNLIAVGAHCQRGDEIVLGKKSHIFTYEGAGVSAYLGVGMNTVPTQPNGSLSVADVESAIRDDDPHYPRTTLVAVENTHNTCGGRVVPTEAIRDIASICASHNLKLHMDGAR 177          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: H3G779_PHYRM (Beta_elim_lyase domain-containing protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3G779_PHYRM)

HSP 1 Score: 122 bits (306), Expect = 3.160e-31
Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGER 113
            M NLI +G  CQRGDE+I G KSHIF YEG GASA+MGV+  TL N  DG++ ++ +A+A+R DD HYPR++L+ +ENT N CG R + +  +RE+    +   + +HVDG R
Sbjct:   59 MSNLIAIGTHCQRGDEVICGNKSHIFTYEGAGASAYMGVSLATLPNQPDGTIKLSDMAAAVRADDIHYPRTSLVEIENTHNTCGGRVLPLSYIREVEQFCKEHNLSLHVDGAR 171          
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Match: A0A067CNT0_SAPPC (Beta_elim_lyase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNT0_SAPPC)

HSP 1 Score: 122 bits (306), Expect = 3.850e-31
Identity = 59/121 (48.76%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDGSLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAARRGGIKVHVDGERSLKERVTV 121
            M NLI VGA CQRGDE+ILG+KSHIF YEG G SA++GV  +T+    +G+L    I SA+R DD HYPR++L+ +ENT N CG R I  + +  + A   R  +K+H+DG R     V +
Sbjct:   66 MSNLIAVGAHCQRGDEVILGKKSHIFTYEGAGVSAYLGVGMNTVPTQANGNLLAADIESAIRDDDPHYPRTSLVAVENTHNTCGGRVIPTESIGAIAAVCARHNLKLHMDGARLANASVAL 186          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12522.1895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L2V5_9PHAE2.120e-4968.60Beta_elim_lyase domain-containing protein n=2 Tax=... [more]
A0A8K1FA57_PYTOL1.660e-3652.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C5R1_PYTIN1.650e-3552.07L-allo-threonine aldolase n=1 Tax=Pythium insidios... [more]
A0A6G0XNI5_9STRA2.770e-3554.87Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
A0A0P1AV90_PLAHL4.620e-3450.44L-allo-threonine aldolase n=1 Tax=Plasmopara halst... [more]
A0A485LPZ3_9STRA1.700e-3251.33Aste57867_24183 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XWH6_9STRA2.520e-3253.10Beta_elim_lyase domain-containing protein n=1 Tax=... [more]
A0A1V9ZG07_9STRA3.540e-3249.56L-allo-threonine aldolase n=1 Tax=Achlya hypogyna ... [more]
H3G779_PHYRM3.160e-3150.44Beta_elim_lyase domain-containing protein n=22 Tax... [more]
A0A067CNT0_SAPPC3.850e-3148.76Beta_elim_lyase domain-containing protein n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001597Aromatic amino acid beta-eliminating lyase/threonine aldolasePFAMPF01212Beta_elim_lyasecoord: 1..113
e-value: 7.7E-25
score: 87.8
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..117
e-value: 2.0E-25
score: 91.4
NoneNo IPR availablePANTHERPTHR10289:SF5L-THREONINE ALDOLASEcoord: 1..113
IPR023603Threonine aldolasePANTHERPTHR10289THREONINE ALDOLASEcoord: 1..113
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12522contigH-elongata_contig12522:4745..5793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12522.1895.1mRNA_H-elongata_contig12522.1895.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12522 4736..5793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12522.1895.1 ID=prot_H-elongata_contig12522.1895.1|Name=mRNA_H-elongata_contig12522.1895.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=122bp
MGNLIGVGAQCQRGDEIILGRKSHIFEYEGMGASAFMGVAYHTLDNLEDG
SLDITAIASALRGDDQHYPRSALLCLENTQNLCGARAIGVKRMREMCAAA
RRGGIKVHVDGERSLKERVTV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001597ArAA_b-elim_lyase/Thr_aldolase
IPR015421PyrdxlP-dep_Trfase_major
IPR023603Threonine_aldolase
IPR015424PyrdxlP-dep_Trfase