mRNA_H-elongata_contig125116.1891.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: D7FPA6_ECTSI (Glutamine synthetase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7FPA6_ECTSI) HSP 1 Score: 343 bits (881), Expect = 9.510e-117 Identity = 153/171 (89.47%), Postives = 164/171 (95.91%), Query Frame = 1
Query: 4 VDQVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
+++ KE VPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIG+ENAFGRHIMEAHYKACLFAG+ ISGTNGEVMPGQWEYQVGPCEGI SGDELW+SRYLLQRVCEQFGVI+SLDPKPIPGDWNGAGCHTNYS+K MREEGGY IIAA+EKLG+KH+EHIAAYGE
Sbjct: 126 MEKAKELVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGYENAFGRHIMEAHYKACLFAGVNISGTNGEVMPGQWEYQVGPCEGIASGDELWISRYLLQRVCEQFGVIVSLDPKPIPGDWNGAGCHTNYSTKPMREEGGYKDIIAAIEKLGEKHDEHIAAYGE 296
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A835YJ88_9STRA (Glutamine synthetase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ88_9STRA) HSP 1 Score: 319 bits (818), Expect = 3.620e-107 Identity = 140/169 (82.84%), Postives = 154/169 (91.12%), Query Frame = 1
Query: 10 QVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
+ ++ +PWFGIEQEYTLFEADGVTPFGWPK GYPGPQGPYYC+IG ENAFGRHIMEAHYKACLFAG+ ISGTNGEVMPGQWEYQVGPC GI +GD+LW+SRYLLQRVCE FGVI+SLDPKPIPGDWNGAGCHTNYS++ MR GGY II A+EKLGKKHE+HI AYGE
Sbjct: 128 EAEKEIPWFGIEQEYTLFEADGVTPFGWPKGGYPGPQGPYYCAIGKENAFGRHIMEAHYKACLFAGVKISGTNGEVMPGQWEYQVGPCVGITAGDDLWVSRYLLQRVCELFGVIVSLDPKPIPGDWNGAGCHTNYSTEPMRNPGGYAKIIEAIEKLGKKHEQHIKAYGE 296
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A0P6IKA6_9CRUS (Glutamine synthetase 2 cytoplasmic n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6IKA6_9CRUS) HSP 1 Score: 290 bits (743), Expect = 2.550e-97 Identity = 124/170 (72.94%), Postives = 145/170 (85.29%), Query Frame = 1
Query: 4 VDQVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYG 513
++ K H+PWFGIEQEYTLFEADGVTP+GWPK G+PGPQGPYYC G +AFGR I++AHY+ACLFAG+ ISG N EVMPGQWEYQVGPC GI+SGD +W+SRY+L RVCE FGVI+S DPKPIPGDWNGAGCHTNYS++ MRE+GG II A+EK+ KH+ HIAAYG
Sbjct: 16 MEAAKAHIPWFGIEQEYTLFEADGVTPYGWPKGGFPGPQGPYYCGAGAHSAFGRLIVDAHYRACLFAGVNISGVNAEVMPGQWEYQVGPCTGIESGDHMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNYSTQAMREDGGMAVIIEAIEKMKLKHKVHIAAYG 185
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: W7U2J3_9STRA (Glutamine synthetase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2J3_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.540e-96 Identity = 129/169 (76.33%), Postives = 149/169 (88.17%), Query Frame = 1
Query: 10 QVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
+V+ VPWFGIEQEYTLFEADGVTPFGWPK G+PG QGPYYCS+G ENAFGRHI EAHY+ACLFA I ISG NGEV+PGQWEYQVGP GI+SGD++W+SRY+LQRVCE FGVI+SLDPKPIPGDWNG+GCHTN+S++ MR+ GG+ II A+EKL +H EHIAAYGE
Sbjct: 126 KVESLVPWFGIEQEYTLFEADGVTPFGWPKGGFPGAQGPYYCSVGTENAFGRHIAEAHYRACLFAKINISGINGEVLPGQWEYQVGPSVGIESGDQMWVSRYILQRVCEAFGVIVSLDPKPIPGDWNGSGCHTNFSTEPMRKPGGFTIIIDALEKLRARHAEHIAAYGE 294
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A7S0P9X0_CAFRO (Glutamine synthetase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0P9X0_CAFRO) HSP 1 Score: 291 bits (746), Expect = 5.140e-96 Identity = 126/162 (77.78%), Postives = 139/162 (85.80%), Query Frame = 1
Query: 28 PWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYG 513
PWFG+EQEYTLFEADG TP GWPK GYPGPQGPYYCS G ENAFGR I +AHY+ACLFAGI +SG N EVMPGQWEYQVGPC GI+SGD +W+SRY++QRVCE FGV+ S DPKPIPGDWNGAGCH NYS+K MRE GGY AII A+EKLG KH EH+A YG
Sbjct: 151 PWFGVEQEYTLFEADGRTPLGWPKGGYPGPQGPYYCSAGAENAFGRAIADAHYRACLFAGIKVSGINAEVMPGQWEYQVGPCLGIESGDHMWLSRYIMQRVCEDFGVVCSFDPKPIPGDWNGAGCHVNYSTKPMREAGGYAAIIEAIEKLGAKHLEHMAVYG 312
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A7S3XXT5_HETAK (Glutamine synthetase n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXT5_HETAK) HSP 1 Score: 287 bits (734), Expect = 3.080e-94 Identity = 128/171 (74.85%), Postives = 146/171 (85.38%), Query Frame = 1
Query: 4 VDQVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
+++ K+ +PWFGIEQEYTLFEADGVTPFGWPKSGYP PQGPYYC G ENA+GR I+EAHYKACL+AGI ISG N EVMPGQWEYQVGP GI SGD +W+SRYLL RVCE FGVI+S DPKPIPGDWNGAGCHTN+S++ MR GG+ I A++KLG+KH EHIAAYGE
Sbjct: 141 MERAKDLLPWFGIEQEYTLFEADGVTPFGWPKSGYPLPQGPYYCGNGTENAYGRPIVEAHYKACLYAGINISGINAEVMPGQWEYQVGPSVGIDSGDHMWVSRYLLTRVCEDFGVIVSYDPKPIPGDWNGAGCHTNFSTEPMRRPGGFAVIEDALKKLGEKHAEHIAAYGE 311
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A024G6F3_9STRA (Glutamine synthetase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6F3_9STRA) HSP 1 Score: 283 bits (724), Expect = 5.250e-93 Identity = 124/165 (75.15%), Postives = 140/165 (84.85%), Query Frame = 1
Query: 22 HVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
H PWFGIEQEYTLFEAD VTP+GWPK G+PGPQGPYYC G +A+GR I +AHY+ACL+AGI ISG N EVMPGQWEYQVGPC GI+SGD+LW+SRY+L RVCE FGV +S DPKPIPGDWNGAGCHTNYS+KEMRE+GG II A+EKL KH HIAAYG+
Sbjct: 123 HEPWFGIEQEYTLFEADNVTPYGWPKGGFPGPQGPYYCGAGAHSAYGRMIADAHYRACLYAGINISGINAEVMPGQWEYQVGPCTGIESGDQLWISRYVLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTKEMREDGGMGKIIEAIEKLKIKHHVHIAAYGQ 287
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A485LAW0_9STRA (Glutamine synthetase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAW0_9STRA) HSP 1 Score: 282 bits (722), Expect = 1.020e-92 Identity = 124/164 (75.61%), Postives = 138/164 (84.15%), Query Frame = 1
Query: 22 HVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYG 513
H PWFGIEQEYTLFEAD VTP+GWPK GYPGPQGPYYC G +AFGR I +AHY+ACLFAGI +SG N EVMPGQWEYQVGPC GI SGD++W+SRY+L RVCE FGVI+S DPKPIPGDWNGAGCHTN S+K MRE GG II A+EK+ KH+EHIAAYG
Sbjct: 122 HEPWFGIEQEYTLFEADKVTPYGWPKGGYPGPQGPYYCGAGAHSAFGRLIADAHYRACLFAGIRVSGINAEVMPGQWEYQVGPCVGIASGDQMWISRYILLRVCEDFGVIVSFDPKPIPGDWNGAGCHTNVSTKAMRENGGIAVIIEALEKMKLKHKEHIAAYG 285
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: A0A1Y1I4U7_KLENI (Glutamine synthetase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I4U7_KLENI) HSP 1 Score: 282 bits (721), Expect = 2.690e-92 Identity = 125/171 (73.10%), Postives = 142/171 (83.04%), Query Frame = 1
Query: 4 VDQVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
+++VKEHVPWFGIEQEYTL++A P GWPK GYPGPQGPYYC +G + A+GR I+ AHYKACL+AGI ISG NGEVMPGQWEYQVGPC GI SGD+LWMSRYLL+RV E V+L+LDPKPIPGDWNGAGCHTNYS+KEMRE+GG AI A+ KL KH EHI YGE
Sbjct: 115 LEKVKEHVPWFGIEQEYTLYQAGTNWPLGWPKGGYPGPQGPYYCGVGADKAWGREIVNAHYKACLYAGINISGINGEVMPGQWEYQVGPCVGIDSGDQLWMSRYLLERVTEMADVVLTLDPKPIPGDWNGAGCHTNYSTKEMREKGGMAAIEEAISKLAIKHVEHIECYGE 285
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Match: F0WLP0_9STRA (Glutamine synthetase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLP0_9STRA) HSP 1 Score: 281 bits (719), Expect = 3.000e-92 Identity = 122/168 (72.62%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 13 VKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFENAFGRHIMEAHYKACLFAGITISGTNGEVMPGQWEYQVGPCEGIKSGDELWMSRYLLQRVCEQFGVILSLDPKPIPGDWNGAGCHTNYSSKEMREEGGYDAIIAAVEKLGKKHEEHIAAYGE 516
V+ HVPWFGIEQEYTLFEAD VTP+GWPK G+PGPQGPYYC G +A+GR I++AHY+ACL+AG+ +SG N EVMPGQWEYQVGPC GI++GD LW+SRYLL RVCE FGV +S DPKPIPGDWNGAGCHTNYS+ MRE+GG II A+EKL KH HIAAYG+
Sbjct: 120 VEAHVPWFGIEQEYTLFEADNVTPYGWPKGGFPGPQGPYYCGAGAHSAYGRSIVDAHYRACLYAGVKVSGINAEVMPGQWEYQVGPCVGIEAGDMLWISRYLLLRVCEDFGVNVSWDPKPIPGDWNGAGCHTNYSTAAMREDGGLSKIIEAIEKLKLKHHVHIAAYGQ 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig125116.1891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig125116.1891.1 >prot_H-elongata_contig125116.1891.1 ID=prot_H-elongata_contig125116.1891.1|Name=mRNA_H-elongata_contig125116.1891.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp FVDQVKEHVPWFGIEQEYTLFEADGVTPFGWPKSGYPGPQGPYYCSIGFEback to top mRNA from alignment at H-elongata_contig125116:353..1685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig125116.1891.1 ID=mRNA_H-elongata_contig125116.1891.1|Name=mRNA_H-elongata_contig125116.1891.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1333bp|location=Sequence derived from alignment at H-elongata_contig125116:353..1685- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig125116:353..1685- >mRNA_H-elongata_contig125116.1891.1 ID=mRNA_H-elongata_contig125116.1891.1|Name=mRNA_H-elongata_contig125116.1891.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1032bp|location=Sequence derived from alignment at H-elongata_contig125116:353..1685- (Himanthalia elongata Himel1 dioecious)back to top |