prot_H-elongata_contig124984.1885.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124984.1885.1
Unique Nameprot_H-elongata_contig124984.1885.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: D7FVY2_ECTSI (EamA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVY2_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.040e-54
Identity = 103/194 (53.09%), Postives = 137/194 (70.62%), Query Frame = 0
Query:    1 PLCLLSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVGPVLQARLLSMVAATGAMETLKEAAGVVDVGEFQDTVGAVGTVVKDIVQD 194
            PLC   F L FW  ER  R YP+  +GLV AQ+L +A+L+  WCA  G+LP SL S+   V P+SG+LA+PI+++WTG+VTT+L+V+GET+A++KVSAAESTIILST+PIWGTAFAAV+LGE++G          +SACTWTSVGP LQ+++LS+ AA     T+ E           D    VGTV+K+IV+D
Sbjct:  465 PLC---FGLGFWLTERCSRKYPEEIFGLVAAQLLTVAVLAVGWCAQAGDLPLSLASLRETVLPSSGNLAVPISLMWTGLVTTSLTVFGETVAMKKVSAAESTIILSTEPIWGTAFAAVLLGESIGXXXXXXXXXXVSACTWTSVGPALQSKMLSLAAAVAGAGTVVEGG--------DDLAETVGTVIKEIVKD 647          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A835ZPH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPH7_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.220e-29
Identity = 70/162 (43.21%), Postives = 103/162 (63.58%), Query Frame = 0
Query:    1 PLCLLSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVGPVLQARLLSMVAATGAM 162
            P+C   F + FWRM +  R  P +A GL  AQ+L ++ LS LW  + G   S +  VL+      G   + + +LWTG++TTAL+V  ET+AL+++SAAEST+I ST+P+WGTAFA  +LGE  G +T  GA+LI+ AC W++    ++ +LL   AA G +
Sbjct:  301 PVC---FGMGFWRMAKFARESPNHAMGLTAAQLLAVSGLSTLWAMLSGADFSVVPGVLA------GDARVGVALLWTGLITTALTVGFETVALKRLSAAESTVIFSTEPLWGTAFAVALLGEHAGLHTAAGALLILCACLWST----MKRQLLGGAAAVGGL 449          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A6U3SPQ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SPQ3_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.120e-25
Identity = 58/148 (39.19%), Postives = 92/148 (62.16%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELP-------SSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            L F + +WRME   + +P+++  +   Q+  + +LS LW  VD           +SLD+++  V  A  S  +  T+LWTG+V T L+VYGETLA+ ++SA E+T++ S +P+ G AFA V LGE +  +TL+GA +I+ AC W ++G
Sbjct:  160 LGFGIGYWRMETMSQRWPRHSLTIAAGQVFAVGLLSWLWVLVDQSNDGMFVWDATSLDALIGEVGGAVQSPKIIATMLWTGVVATGLTVYGETLAMTQISATEATLLFSIEPVCGAAFARVFLGEKLSLSTLIGAGVILMACVWNALG 307          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: B7GA19_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GA19_PHATC)

HSP 1 Score: 111 bits (277), Expect = 5.910e-25
Identity = 65/148 (43.92%), Postives = 99/148 (66.89%), Query Frame = 0
Query:    1 PLCLLSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILS---GLWCAVDGELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            P+C   F +AFWRME   + +P  A     AQ+L++ ++S   GL+        + L + LS     +  LA   ++ WTG ++TAL+VY ETLAL+ +SAAE+T+I ST+P+WGTAFAA+++GET+GW + VGAVLI+S C ++++G
Sbjct:  336 PIC---FGIAFWRMEAAMQRFPNEANRSTAAQLLMVFLVSLTFGLFTDPGAFNVAQLQAWLS----DTNILA---SLFWTGCISTALTVYMETLALKTLSAAETTLIFSTEPLWGTAFAALIMGETLGWESAVGAVLILSGCVFSNLG 473          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A448Z5H3_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5H3_9STRA)

HSP 1 Score: 111 bits (277), Expect = 6.070e-25
Identity = 67/153 (43.79%), Postives = 96/153 (62.75%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILS---GLWCAV------DGELPSSLDSVLSLVFPASGSLAMP---ITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            L+F L FWRME+    +P+ A  +  AQ+L I   S   GLW          G  P+ L+S+ +  FP       P    ++ WTG VTTAL++Y ETLAL+ +SAAE+T+I ST+P+WGTAFA  V+GE +G N +VGA LI++AC ++++G
Sbjct:  393 LTFGLGFWRMEQAMHLFPREAPRMTAAQLLAIFCASAGYGLWTLGVFGGPGAGADPAGLESIAA-AFPWRDWCTDPSILFSLFWTGCVTTALTIYMETLALESLSAAETTLIFSTEPLWGTAFAVAVMGEQMGTNAVVGAGLILAACLYSNLG 544          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A6S8J0W1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8J0W1_9STRA)

HSP 1 Score: 110 bits (274), Expect = 9.530e-25
Identity = 63/141 (44.68%), Postives = 94/141 (66.67%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            L+F +AFWRME+    YP+ A     AQ+L + + S  +  V    P   D    + F +  ++ +  ++ WTG +TTAL++Y E+ AL+ +SAAE+T+ILST+P+WGTAFAA VLGE VG +T +GAVLII+AC  +++G
Sbjct:  277 LAFGVAFWRMEQVMHKYPEEAKRATAAQLLAVFLGSAAYGFVTD--PGFFDMTKIIQFVSEPTVLL--SLFWTGCITTALTIYMESTALKSLSAAETTLILSTEPLWGTAFAAAVLGEQVGVDTGIGAVLIIAACLVSNLG 413          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A7S0TJA2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TJA2_HEMAN)

HSP 1 Score: 106 bits (265), Expect = 2.280e-24
Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVD-------GELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISAC 139
            L+F   FW+ME   R +P     L   Q+ ++A+ +  W  +        GELP+ +D++++    A G   + + +LWTG+VTTAL+V+ ET+AL ++ +AE T++ ST+P+WGTAFAA +LGE VG NT VG  LI++AC
Sbjct:  161 LAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPA-IDALVA----ALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAAC 297          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A7S2UQU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQU1_9STRA)

HSP 1 Score: 106 bits (264), Expect = 5.420e-24
Identity = 58/144 (40.28%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELPSSLDSVLSLVFPASGSLAMPI---TILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            ++F L FWRME+  + +P +A  +  AQ+L + + S  +CA+     S    V+  +   +  L  P+    + WTG++TTAL+VY ETLAL+ +SAAE+T+I ST+P+WG+AFAA V+GE  G +  +GA LI+  C ++++G
Sbjct:  121 VAFGLGFWRMEKAMQRFPDDAARMTAAQLLAVFVSSATYCAISF---SKGMEVIPDMTQLTEWLTDPMILGALFWTGLITTALTVYMETLALKTLSAAETTLIFSTEPLWGSAFAAAVVGERFGMDAAIGAGLILGGCAYSNIG 261          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A7S1EIS4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIS4_HEMAN)

HSP 1 Score: 106 bits (265), Expect = 1.020e-23
Identity = 59/142 (41.55%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVD-------GELPSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISAC 139
            L+F   FW+ME   R +P     L   Q+ ++A+ +  W  +        GELP+ +D++++    A G   + + +LWTG+VTTAL+V+ ET+AL ++ +AE T++ ST+P+WGTAFAA +LGE VG NT VG  LI++AC
Sbjct:  279 LAFGAGFWKMEHAMRDHPGQGGALTAVQLAVVALCTVAWTVLSPGSGTPMGELPA-IDALVA----ALGQSQVQMALLWTGLVTTALTVWLETVALGRLPSAEVTVLFSTEPLWGTAFAAALLGEQVGANTFVGGGLIMAAC 415          
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Match: A0A1E7FD72_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD72_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.740e-23
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 0
Query:    5 LSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGELPSSLDSVLSLVFPASGSLAMP---ITILWTGIVTTALSVYGETLALQKVSAAESTIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVG 145
            L+F + FW++E+    YP  A  L  AQ+L I      +CA  G   SS+D+     +P       P    ++ WTG++T+AL++Y E  A++ +SAAE+T+I +T+PIWGTAFAAVV+ E  G N+ VGA  I+SAC ++++G
Sbjct:  237 LAFGIGFWKVEKALERYPTEARRLTAAQLLAI------FCASVGFGLSSIDASTLQSYPWMDWFTNPSIMFSLFWTGVITSALTIYMENKAMETLSAAEATVIFATEPIWGTAFAAVVMSEQFGMNSAVGAAFIMSACFYSNLG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124984.1885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVY2_ECTSI2.040e-5453.09EamA domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZPH7_9STRA2.220e-2943.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U3SPQ3_9STRA3.120e-2539.19Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7GA19_PHATC5.910e-2543.92Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A448Z5H3_9STRA6.070e-2543.79Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A6S8J0W1_9STRA9.530e-2544.68Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0TJA2_HEMAN2.280e-2441.55Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2UQU1_9STRA5.420e-2440.28Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S1EIS4_HEMAN1.020e-2341.55Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A1E7FD72_9STRA6.740e-2340.97Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000620EamA domainPFAMPF00892EamAcoord: 26..143
e-value: 4.5E-9
score: 36.6
NoneNo IPR availablePANTHERPTHR42920:SF5coord: 3..141
NoneNo IPR availablePANTHERPTHR42920FAMILY NOT NAMEDcoord: 3..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 149..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..46
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 72..145
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 123..145
NoneNo IPR availableTMHMMTMhelixcoord: 24..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124984contigH-elongata_contig124984:592..1182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124984.1885.1mRNA_H-elongata_contig124984.1885.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124984 592..1182 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124984.1885.1 ID=prot_H-elongata_contig124984.1885.1|Name=mRNA_H-elongata_contig124984.1885.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
PLCLLSFALAFWRMERHCRAYPKNAWGLVGAQMLIIAILSGLWCAVDGEL
PSSLDSVLSLVFPASGSLAMPITILWTGIVTTALSVYGETLALQKVSAAE
STIILSTQPIWGTAFAAVVLGETVGWNTLVGAVLIISACTWTSVGPVLQA
RLLSMVAATGAMETLKEAAGVVDVGEFQDTVGAVGTVVKDIVQDHL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000620EamA_dom