prot_H-elongata_contig12495.1883.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12495.1883.1
Unique Nameprot_H-elongata_contig12495.1883.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: D8LI31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI31_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 9.590e-52
Identity = 87/104 (83.65%), Postives = 93/104 (89.42%), Query Frame = 0
Query:    1 MPKRKSFISQGAAFGTSLFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            MPK K  +SQG AF TSLFTD+AGVA+QGVRQATTLGEDD RL VPG VWFAKPRRLK+GATL RVM GN++EDMLWQLHDIMLTKSMLSHHRLDKYIK LDRV
Sbjct:  553 MPKGKGLLSQGVAFSTSLFTDVAGVAMQGVRQATTLGEDDARLTVPGRVWFAKPRRLKNGATLKRVMRGNVKEDMLWQLHDIMLTKSMLSHHRLDKYIKILDRV 656          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A835YUE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE7_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.780e-36
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 0
Query:    1 MPKRKSFISQGAAFGTSLFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            +P+   F  Q  A GT+LFTD+AGVA QG+RQ +  G DD+ L VPG VWF KPRRL++GAT+ +  +G LR+D+LWQ+HD+MLTKSMLSHH L +Y+  LDRV
Sbjct:  401 LPRGSGFFGQSLAMGTTLFTDVAGVAAQGLRQRSAAGGDDSALIVPGTVWFVKPRRLRAGATMTKSRSGALRDDVLWQMHDVMLTKSMLSHHSLARYVAVLDRV 504          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A4D9DDN3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DDN3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 6.590e-18
Identity = 47/111 (42.34%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    7 FISQGAAFGT------SLFTDIAGVAIQGV--RQATTLGEDDTR-----LAVPGLVWFAKPRRLKSGATLARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            ++S+G A G       S    + G  +Q V   Q T   E++       L +PG V++ KPR+L  GAT+  VM GNLRED+LW++HDI +++SML HH LDKYI  L R+
Sbjct:  477 YVSEGDATGIYFDYARSWMKGVVGATLQQVVTHQVTKKEEEEDEGGVEALILPGRVYYIKPRKLHGGATIKEVMRGNLREDVLWKIHDIFVSQSMLKHHSLDKYITVLARI 587          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A7S1B8E3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B8E3_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.230e-12
Identity = 40/95 (42.11%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   12 AAFGTSLFTDIAGVAIQGV--RQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            +A G S  +     ++ G+  R A   GE+  R++VPG  +  KPRRL  GA++  V  GN+R ++LWQLHD+ L+  M  H  LD YI  LDRV
Sbjct:  441 SAVGASWVSAAVSTSVDGIGKRVAGREGEE-FRMSVPGKAFVVKPRRLDHGASMYEVEEGNVRAEVLWQLHDVPLSIKMWRHGTLDSYIHGLDRV 534          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: K0SG86_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SG86_THAOC)

HSP 1 Score: 68.2 bits (165), Expect = 1.650e-12
Identity = 34/91 (37.36%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   18 LFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNG----NLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            + +D   + + G+ +     + D +L++PG V+  +PRRL  G++    +N     +LR  +LWQL DI+L++S+ SHHRL+ YI+TLD+V
Sbjct:   28 IMSDAVSLTVSGIGKDK---KGDEKLSLPGRVFLVRPRRLGGGSSSIHEVNDGGKESLRAAVLWQLKDILLSRSLWSHHRLEGYIETLDKV 115          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A6T5V5A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5V5A5_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.810e-12
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   39 DDTRLAVPGLVWFAKPRRLKSGATLARVMN----GNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            ++T+L++PG  +F KPRRL    +L  V +    G +R  +LWQL DI+L+KSM  HH LD YI+ LDRV
Sbjct:  474 EETKLSIPGTKYFVKPRRLGGACSLHHVGDISGTGAIRASVLWQLDDILLSKSMWDHHGLDNYIQALDRV 543          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A7S3ZRK4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZRK4_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.050e-11
Identity = 45/97 (46.39%), Postives = 58/97 (59.79%), Query Frame = 0
Query:   11 GAAFGTSLFTDIAGVAIQGV--RQATTLGEDDTRLAVPGLVWFAKPRRLKSGAT-LARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            GAA   S F    G A + V   Q T L +DD  L +PG V+F KPR    GA  + R   G  RE++LWQL+D++L+KSML+H  LD YI  LDR+
Sbjct:  374 GAALAGSAFEQGMGAAGRAVTDEQRTKLTDDD-ELRLPGDVFFLKPRA--DGAVGVYRGGAGRAREELLWQLNDVLLSKSMLAHATLDAYISALDRI 467          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A7S2LJY6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LJY6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 9.550e-11
Identity = 34/96 (35.42%), Postives = 55/96 (57.29%), Query Frame = 0
Query:   15 GTSLFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNG------NLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            G    +D A + + G+   ++  + D  LAVPG V+  +PRR+  G++    + G      N R  +LWQL+D++L+KS+  HH    YI++LDRV
Sbjct:  439 GVGWMSDAARLTVTGLTSGSSK-KKDAHLAVPGRVYLIRPRRIGGGSSSIHEVGGSIGGRENFRAAVLWQLNDVLLSKSLWKHHSQSSYIRSLDRV 533          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: A0A7S2FE87_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FE87_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.090e-10
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
Query:   38 EDDTRLAVPGLVWFAKPRRLKSGAT-LARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            ++DT L+ PG+V+  KPR   SG   +     G + E +LWQLHDI+++KSML+HH L  Y++ LD V
Sbjct:  112 DEDTLLSCPGVVYMLKPRA--SGQVHMVTTKRGGIGESLLWQLHDILISKSMLAHHTLPAYVRCLDVV 177          
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Match: K0SZK5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZK5_THAOC)

HSP 1 Score: 65.9 bits (159), Expect = 2.420e-10
Identity = 32/91 (35.16%), Postives = 58/91 (63.74%), Query Frame = 0
Query:   18 LFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVWFAKPRRLKSGATLARVMNG----NLREDMLWQLHDIMLTKSMLSHHRLDKYIKTLDRV 104
            + +D   + + G+ +     + D +L++PG V+  +PRRL  G++    +N     +LR  +LWQL DI+L++S+ SHH+++ YI+TLD+V
Sbjct:  433 IMSDAVSLTVSGIGKDK---KGDEKLSLPGRVFLVRPRRLGGGSSSIHEVNDGGKQSLRAAVLWQLKDILLSRSLWSHHQVEGYIRTLDKV 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12495.1883.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LI31_ECTSI9.590e-5283.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUE7_9STRA3.780e-3658.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DDN3_9STRA6.590e-1842.34Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S1B8E3_9STRA1.230e-1242.11Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
K0SG86_THAOC1.650e-1237.36Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6T5V5A5_9STRA5.810e-1248.57Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3ZRK4_9STRA1.050e-1146.39Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2LJY6_9STRA9.550e-1135.42Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2FE87_9STRA1.090e-1045.59Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K0SZK5_THAOC2.420e-1035.16Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12495contigH-elongata_contig12495:3221..4047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12495.1883.1mRNA_H-elongata_contig12495.1883.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12495 3221..4050 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12495.1883.1 ID=prot_H-elongata_contig12495.1883.1|Name=mRNA_H-elongata_contig12495.1883.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MPKRKSFISQGAAFGTSLFTDIAGVAIQGVRQATTLGEDDTRLAVPGLVW
FAKPRRLKSGATLARVMNGNLREDMLWQLHDIMLTKSMLSHHRLDKYIKT
LDRV*
back to top