prot_H-elongata_contig12495.1882.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12495.1882.1
Unique Nameprot_H-elongata_contig12495.1882.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: D8LI22_ECTSI (Importin subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI22_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 2.520e-76
Identity = 137/218 (62.84%), Postives = 165/218 (75.69%), Query Frame = 0
Query:   89 QRALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDE---EEDDN------------GHGGNGAWSHH-SNEPGGQH------LPSLGRGAHLTRPAWMN 284
            +R LVKEAAWVASNVAAGR EHR AL+ QG+PAALT LLLSDQ DLQQEAA+GIWN+V+HD  LL QAA+++++M  +  LVR  SPPVVRCALSF++LVC+NVPGG R+VE +GGLEAIDDVHY+GQ DP+L+EAAGAIVD+FFG++GY+SSDE   EE D               GG+G  S + +  P GQ       L  LGRGAHLTRP+WMN
Sbjct:  358 RRVLVKEAAWVASNVAAGRREHREALVAQGSPAALTLLLLSDQLDLQQEAAHGIWNIVAHDSELLLQAAKDDRVMGAYVALVRAQSPPVVRCALSFLQLVCQNVPGGPRMVESAGGLEAIDDVHYSGQADPELQEAAGAIVDRFFGDDGYESSDEGGDEETDTETVVGGGDGFGFNFGGSGDTSQNGARGPPGQXXXXXQPLAPLGRGAHLTRPSWMN 575          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A835YTV7_9STRA (Importin subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTV7_9STRA)

HSP 1 Score: 127 bits (319), Expect = 1.120e-29
Identity = 81/205 (39.51%), Postives = 108/205 (52.68%), Query Frame = 0
Query:   91 ALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGG------LLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEED-----DNGHGGNGAWSHHSNEPGGQHLPSLGRGAHLTRPAWMN 284
            A+VKEAAW+ S++  G    R A++  G       LL S Q DLQ+EAA  +WN+V+           L        +++ F  L+R P    V  ALS+++LVCE VP G+R VE +GGLEAID++HY G  DP +   A AIVDKFFGE+  + S  +       D GHG                   +GRG HLT PAWM+
Sbjct:  364 AMVKEAAWLVSSLVGGHASCRDAVLAAGFLVPTLDLLRSGQFDLQREAARAVWNIVADAANSAGAQQALQAVTAEPGVLAAFVALLRVPDMETVAVALSYVRLVCERVPEGSRAVERAGGLEAIDELHY-GPVDPAISAQAAAIVDKFFGEDYEEDSTAQPAAPAPADIGHG-------------------MGRGKHLTEPAWMH 548          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S2XV23_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV23_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.160e-25
Identity = 70/177 (39.55%), Postives = 100/177 (56.50%), Query Frame = 0
Query:  111 RAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPS----LGRGAHLTRPAWM 283
            R AL+Q G    L  LL SDQ D Q+EAA+G++N+   DG  L +  +++ ++  +  L+R P   VVRCALSF+ +V  + P G  +VE +GG+E IDD+HY+  TD ++   AG +VD+FFGE+ +   D           G           Q  P+    LGRG HLT+PAWM
Sbjct:   11 RRALVQAGVGPCLLHLLHSDQFDFQKEAAFGLYNLCC-DGVHLEEVMKSD-VLQIYLRLLRVPDNSVVRCALSFLTVVLTHYPQGPHVVERAGGIEVIDDIHYH-HTDVEIAAYAGHLVDEFFGEDYHGDLD-----------GPSPPFEPRQPQQEPPAFSLGLGRGKHLTQPAWM 173          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S2BA76_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BA76_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.610e-20
Identity = 75/197 (38.07%), Postives = 112/197 (56.85%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGA-RLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPS--LGRGAHLTRPAWM 283
            R L+KEA W  SN+AAG P H   ++    P  LT LL + + D+Q+EA + + N++S D   +A A  N  +    A L+RT    V+ C+L+ + ++ +  P  A  +VE++GGLEAIDD+HY G    D+RE A ++VD ++G+E Y+ +   +D    G  G     S+  G Q  P   LGRG  + RPAWM
Sbjct:  118 RGLLKEAVWTMSNMAAG-PVHHRTMMANFLPDLLT-LLNTGKFDVQREALFAVRNLMS-DPACVAFALGNGVLPPCIA-LLRTHDHDVILCSLTVIGVILKTSPSTAPTIVEDAGGLEAIDDLHY-GDVSDDVRELAASLVDTYYGDE-YEPTQSGDD----GRQGQLMQFSDVRGPQAQPQGGLGRGRDINRPAWM 304          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S4L2U6_GUITH (Importin subunit alpha n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L2U6_GUITH)

HSP 1 Score: 91.7 bits (226), Expect = 3.250e-17
Identity = 50/147 (34.01%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEE 236
            + L+KEA WV SN+AAG+  HRAA++++G  A+L  +L +   D+++EAA+ +++++ HD          E + + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y   +   +  ++  +VDK+FGE+
Sbjct:  339 KGLMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSS-FLVDKYFGED 482          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S0HZ05_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HZ05_9CRYP)

HSP 1 Score: 90.9 bits (224), Expect = 5.210e-17
Identity = 47/124 (37.90%), Postives = 80/124 (64.52%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHY 213
            +AL+KEA+WV SNVAAG+P HRAA++++G    L  +L +   D+++EAA+ +++++ HD     Q   N ++ + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y
Sbjct:  321 KALMKEASWVLSNVAAGKPTHRAAMMEEGMQKTLFHILQTSHFDIRKEAAFALFHLL-HDPAY-TQTLFNRELATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIY 442          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: L1IB06_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IB06_GUITC)

HSP 1 Score: 87.0 bits (214), Expect = 4.560e-16
Identity = 53/161 (32.92%), Postives = 90/161 (55.90%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQT-----------DPDLREAAGA---IVDKFFGEE 236
            + L+KEA WV SN+AAG+  HRAA++++G  A+L  +L +   D+++EAA+ +++++ HD          E + + F  L+R P P VV  AL+  + +   + GG RL EE+ G++A++ + Y   +           +   RE   A    VDK+FGE+
Sbjct:  165 KGLMKEATWVLSNIAAGKANHRAAMMEEGVHASLIVILKTSHFDIRKEAAFALFHLL-HDPAYTPTLFTPE-LATEFVGLLRAPDPQVVDMALTVAERILATMEGGPRLFEEADGIDALEQLIYANSSQAVVARSSFLGESPRREGGDADVCAVDKYFGED 323          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A7S0DM12_9EUKA (Importin subunit alpha n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM12_9EUKA)

HSP 1 Score: 79.7 bits (195), Expect = 4.030e-13
Identity = 51/158 (32.28%), Postives = 82/158 (51.90%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPD--LREAAGAIVDKFFGEEGYDSSDEEE 245
            R L KEA WV  N+ AG  EH   +I+ G    L  +    Q DL++EA + + NV  +D  L  +    + ++     L++      +   + F++++        RLVEE+GG++A++ V    QT PD  L + AG IVDK++GE+     DE+E
Sbjct:  338 RGLKKEAIWVVGNILAGPKEHVEVVIKSGFLPVLLEIFQKGQFDLKREAIHALLNVAKYDEPL--EFMVKQGVIPPVLSLMKVDERDTIAACIQFIEIILARNKDAVRLVEEAGGIDALETV----QTHPDGSLWDRAGGIVDKYWGEDADYDDDEKE 489          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A8H4AKR9_GIGMA (ARM repeat-containing protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AKR9_GIGMA)

HSP 1 Score: 77.4 bits (189), Expect = 1.720e-12
Identity = 44/153 (28.76%), Postives = 86/153 (56.21%), Query Frame = 0
Query:   90 RALVKEAAWVASNVAAGR-PEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSS 241
            R + KE+ WV SN+ A R PE    +   G    L+++      D+++EAAY + N+ SH G    +   ++ ++  F   +R+    ++R  L +++L+   V  G +L+E+  G++A++ V    Q DP LR+ +  ++DK+FGE+ ++++
Sbjct:  228 RPVKKESLWVMSNITASRRPEVLIKVFNAGFIPILSSIATHTNFDIRKEAAYSLLNIASH-GEEYMKPLPHQDLLPGFLVFIRSQDIDLIRLGLGYVELLLTQVQNGQQLLEQMQGIDALESV--TSQEDPSLRDTSTRLMDKYFGEDFFNTN 377          
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Match: A0A024TZR0_9STRA (Importin subunit alpha n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZR0_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.440e-12
Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 0
Query:   77 LHFLRNLLPLKPQRALVKEAAWVASNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDGGLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVEESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGHGGNGAWSHHSNEPGGQHLPSLGRGAHLTRPAW 282
            L+ L+ LL L+    +V EAAWV SN+AA        L++      L A       D+++EAA+ + N+         Q    + ++  +  L+  P   VV  AL F++ V  +VP G   VE +GG+ A++ +     T   L   A  +V++F+GE    S D      GH     ++   + P  Q    +GRGAH+TRPAW
Sbjct:  314 LYMLKRLLWLENDSHVVAEAAWVVSNLAARDAAVVELLVKHDFLPRLGACFRDGGYDIRKEAAFALTNIAITSTTYAEQIVALD-VIDGYVTLLSVPDLNVVGTALQFIEHVLRHVPRGVYTVESAGGIAALETIQDG--TSDFLATKAEQLVNEFYGE----SYDAPFSPPGHAPEATFNQPQSSP--QSTAGMGRGAHMTRPAW 510          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12495.1882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LI22_ECTSI2.520e-7662.84Importin subunit alpha n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835YTV7_9STRA1.120e-2939.51Importin subunit alpha n=1 Tax=Tribonema minus Tax... [more]
A0A7S2XV23_9STRA1.160e-2539.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BA76_9STRA1.610e-2038.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4L2U6_GUITH3.250e-1734.01Importin subunit alpha n=1 Tax=Guillardia theta Ta... [more]
A0A7S0HZ05_9CRYP5.210e-1737.90Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1IB06_GUITC4.560e-1632.92Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0DM12_9EUKA4.030e-1332.28Importin subunit alpha n=1 Tax=Amorphochlora amoeb... [more]
A0A8H4AKR9_GIGMA1.720e-1228.76ARM repeat-containing protein n=1 Tax=Gigaspora ma... [more]
A0A024TZR0_9STRA2.440e-1230.58Importin subunit alpha n=1 Tax=Aphanomyces invadan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 107..147
e-value: 0.09
score: 21.9
coord: 149..190
e-value: 120.0
score: 4.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 68..235
e-value: 8.1E-23
score: 82.5
NoneNo IPR availablePANTHERPTHR23316:SF1IMPORTIN SUBUNIT ALPHA-9coord: 89..236
NoneNo IPR availablePANTHERPTHR23316IMPORTIN ALPHAcoord: 89..236
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 78..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12495contigH-elongata_contig12495:24..1581 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12495.1882.1mRNA_H-elongata_contig12495.1882.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12495 24..1581 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12495.1882.1 ID=prot_H-elongata_contig12495.1882.1|Name=mRNA_H-elongata_contig12495.1882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
LALLILECEIAPGAMFGMRGVLVFASTAKRESGVSHSDAIMNTFWFCFYS
FFCCWTLDDVFFCFVSFLDSIPSPSHLHFLRNLLPLKPQRALVKEAAWVA
SNVAAGRPEHRAALIQQGTPAALTALLLSDQRDLQQEAAYGIWNVVSHDG
GLLAQAARNEKIMSTFAELVRTPSPPVVRCALSFMKLVCENVPGGARLVE
ESGGLEAIDDVHYNGQTDPDLREAAGAIVDKFFGEEGYDSSDEEEDDNGH
GGNGAWSHHSNEPGGQHLPSLGRGAHLTRPAWMNP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold