prot_H-elongata_contig12469.1863.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12469.1863.1
Unique Nameprot_H-elongata_contig12469.1863.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length948
Homology
BLAST of mRNA_H-elongata_contig12469.1863.1 vs. uniprot
Match: D8LKW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW2_ECTSI)

HSP 1 Score: 484 bits (1247), Expect = 2.650e-148
Identity = 422/1078 (39.15%), Postives = 520/1078 (48.24%), Query Frame = 0
Query:    1 MVAQPGFTKKRGGCRQHLVQTLVEAAPGPVPPSALSPMLRARETGPSVGDLALEILERVA----DGNGRSSLDGESMGAPKKAILELFHVLVEEVVASGTGKRGKSAATRGGPPGHLLSFLVRARTVLPAHVLVFSKELLALADSRWSAARKLSIAVLGLIL----ELGGACSETI-DQALASVLQFARTDSDATVRAAAFDCVVDFLDGSYERVLSRAVRDPDQSLRWWVRYFNALRQVLL---PTSLHYILCQADE-GEGRASGRGIV--------------------ASDVNSSDDIP-------------------------------NDGPPDDGSRAHGRGHSSGAHIHTMQTNMGPDEKDDGERPGKRRDIVE--PWAVGGVLLTCLSVSAEAPLVDGSKVVRAKAIACSLRILDAYGGGIGREG-HCHKTVGEVGEKFHNSNRTTARVLSIVRSGVVRGACVALEAVASESCVGATTQSASSPGLAGSGKTRRVVDAARDLLSLTCVTPTPIDLLVCYTRC--------GNASGATTAPAAEAKRAIRDVVVKRFCSDIGSLLKMISTVMKAKYREGTEADPEESFDSTGRGNDRHLEGCSSDSPSEVLCELLAGVDTEALTRLLGAALEAYSGVGNGVNSDHSGEPSNFSAGTDVPVLLRTLVLLGEAKGLT----------------------TGATTGPGRTESLDQDHLLASRIGHFWRRLEQRMWDIERYEAGPTCSGRS--------NNRGVEVDDDD-----------EMAASNAVPECAELLRLFRLLATRSLLSQEDRVALEDLVFPSALSRRRLILPAVSLALALDEPHRLLLSSLAVLQDAAFYRTSTDVGRACNYVRLIGVMARENASFITAHVRKQYGRLADRRIGQGDLQEEATQRDLEDGED-YMAEVSNREAMEREIRDLREASVTSDGMLSCYTPFLLAIVKRRASEDPDSGDTPDVSPGSR-EAQDG--------HGGVYP----RSEEGSVGGAVGHA-------RCPPSLCAEALWALSEYAVLSPGLAAAEVLPVAEALARNTVEHPQV 941
            +VAQPGF KKR G RQHLV  L EAA GPVPPSAL P+LRA+ETGP+  DL LEIL+R+     +G G  S+   S    K A+++L H +V EVV SG  K G+  A   GPP HL+SFLV A + LP + LVF+K+LL L +S  S ARK+S+A+L  IL    ELG  C  TI D ALA+VL+ +R+D DATVR++AFD V  F+ G  E  L R   D D      +        VL    P +    L   D  G G   GRG+                     A+    +D  P                                +G     SR H  GH   AH  T +     +    G R  +R+  V   PWAVGG L + LS +AEA L DGSK VRAKA+AC LRIL+ +GG I   G  C  T G+           ++RV +I+ S V +GA  ALE +A ++  G T Q AS     G G+ R+  D AR LL L C+  +P+DL++CY RC        G A GAT     EAKRA+R++    FC+DI  L K +S +M A  R     D   + D          EG S    SEVLCE+LAGVD+ A+  LL  ALEAY+        D  G      A    PVLLRTL LL EA G                         G +   G  +  +Q   LA   G FWRRLEQRM DIER + G    GR           RGV V  +              AAS+ + E +ELLR+F+LLATRSLLS E+  ALE LVFP+ALSRRR                                        AC+YVRLIGV+ARENASFI AH+R+QY      R G+        +   E+GED YMA VSNREAM         A+   +G                     D GD      GSR +AQD          GG       R + G   GA   A        CP +LC EALWALSEYAVLS GLAAAEVLP+AE LA +T+EHPQV
Sbjct:   80 LVAQPGFAKKRKGYRQHLVHALAEAASGPVPPSALLPILRAKETGPAATDLTLEILQRIIRKADEGGGGGSI--RSNDTSKNAVIDLLHHVVAEVVTSGVTKGGRRGAK--GPPAHLISFLVNAFSTLPEYALVFAKDLLVLTESSSSPARKMSLAILASILGHGRELGAQCGGTILDPALAAVLRLSRSDGDATVRSSAFDSVAKFI-GEVESTLYRQRLDDDDDTSSDLDDGTPSGDVLAHQQPRNTAETLTDDDSTGSGAGGGRGVTHGARATETMEMEIAPRGDGAANHAGDADACPLSEKRPSATARTPAACTQMGAMHGATSGRQSGEGDTPVTSRQHTTGH---AHRETREAGAASE----GNRGQRRKAKVSAGPWAVGGALQSSLSAAAEALLTDGSKAVRAKALACLLRILEVHGGTIKPRGASCENTTGDKAGSAAAPG-VSSRVETIL-SAVAKGALAALEPLAGDNTGGPTIQ-ASLNSTGGGGRHRKAADTARALLVLPCIESSPVDLVMCYARCRVAPGVGEGEAVGAT-----EAKRALREIAQATFCADIRKLWKAVSVIMAADERRQGLEDGSANIDFADT-----TEGASFPL-SEVLCEVLAGVDSGAIASLLCDALEAYAAEDEIAPRDRDG------AAASAPVLLRTLALLAEATGHAKNGVDERNGARQPGGSSNRERLAGRSGQHGAGDEEEQLRTLAGSQGLFWRRLEQRMEDIERDKRGEETGGRGVEGDRGQLRRRGVGVSVEQYHGGXXXXXXXRSAASDTISELSELLRMFQLLATRSLLSPENGAALEALVFPAALSRRR----------------------------------------ACDYVRLIGVLARENASFIAAHIREQYSARCLSRPGE--------EESAENGEDDYMAGVSNREAM-------GAATTAEEGEXXXXXXXXXXXXXXXXXXXXD-GDCGGARVGSRGDAQDEMQYRMAQQDGGKVEATVFREDVGQDRGATAAAGVSLPASSCPRALCTEALWALSEYAVLSAGLAAAEVLPLAERLASDTLEHPQV 1069          
BLAST of mRNA_H-elongata_contig12469.1863.1 vs. uniprot
Match: A0A6H5L3C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C3_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.170e-61
Identity = 262/841 (31.15%), Postives = 350/841 (41.62%), Query Frame = 0
Query:  132 SKELLALADSRWSAARKLSIAVLGLILE----LGGACSETI-DQALASVLQFARTDSDATVRAAAFDCVVDFL-----------------------DGS---------YERVLSRAVRDPDQSLRWWVRYFNALRQVLLPTSLHYILCQADEGEGRASG----------------------------RGIVASDVNSSDDIPNDGPPDDGSRAHGRGHSSGAHIHTMQTNMGPDEKDDGERPGKRRDIVEPWAVGGVLLTCLSVSAEAPLVDGSKVVRAKAIACSLRILDAYGGGIGREGHC-HKTVG-EVGEK----------------------------FHNSNRTTAR-------------------------------------------------------VLSIVRSGVVRGACVALEAVASESCVGATTQSASSPGLAGSGKTRRVVDAARDLLSLTCVTPTPIDLLVCYTRCGNASGA---TTAPAAEAKRAIRDVVVKRFCSDIGSLLKMISTVMKA-KYREGTEADPEESFDSTGRGNDRHLEGCSSDSPSEVLCELLAGVDTEALTRLLGAALEAYSGVGNGVNSDHSGEPSNFSA-GTDVPVLLRTLVLLGEAKGLTTGATTGPGRTESLDQDHLLASRIGHFWRRLEQRMWDIER--------YEAGPTCSGRSNNRGVEVDDDD------------------EMAASNAVPECAELLRLFRLLATRSLLSQEDRVALEDLVFPSALSRRRLILPAVSLALALDEPHRLLLSSLAVLQDAAFYRTSTDVGRACNYVRLIGVMARENASFITAHVRKQYGRLADRRIG 791
            +++LLAL +S  S ARK+S+AVL  ILE    LG  C  TI D ALA++L+ AR+D DATVR++AFD +  F+                       DG+           R  + A+ D                      ++   +  ++ G    +G                             G  +   +     P   P     RAH     +GA          P E + G+R  + +    PW +GG L + LS +AEA L DGSK VRAKA+ACSL IL+ +G  I   G C   T G E G                              F  S R   R                                                       + ++ R  V +GA +ALEA+A ++  G+TTQ AS     G G+ R+  D AR LL L CV P+P++L++CY RC  ASG        A EAKRA+R++    F +DI  LLK +S +M A + R+G E       D +   N       +S S SEVL E+LAGVD+ A+  LL  ALEAY+        D  GE   +S   +D    LRTL                             A   G FWRRLEQRM DIER        ++      G+   RG+ +  +                     AA +AV E +ELLR+F+LLAT SLLS ++  ALE LVFP+ALSRRRLI+                  S+ +    AF        RAC+YVRLIGV+ARENASFI AHVR+QY    +RR G
Sbjct:   11 TQDLLALTESSSSPARKMSLAVLAAILEHGRELGAQCGGTILDPALAALLRLARSDGDATVRSSAFDSIAKFIGQMGTTLYRQRLHDNDDTSSDLDDGTPSGDVLAHQQSRSTAEALTDXXXXXXXXXXXRGVTHGARATETMDMEIAPSERGAADHAGDADACPLSEKIPSATARTPMARTQMGAMHGATSGRQSRQGRTPVISPQHTSDRAHRATRGAGA----------PSEGNRGQRR-EAKVSAGPWTMGGALQSSLSAAAEALLTDGSKAVRAKALACSLLILEVHGDTIQPRGACCENTAGDEAGSAAGPGVSSRVERTLSTASSRCGGILILMAFLRSQRRLPRSSVDFASRPCMSGIAILCPSLRKRDLRQRCFPYTRGSFTWVHLSKSLVVQEPFLPLSTLCRVQVAKGALLALEALAGDNHGGSTTQ-ASLNSTGGGGRHRKAADTARALLILPCVEPSPVELVMCYARCRVASGVGEGEAVGATEAKRALREIAQATFSADIRKLLKAVSVIMAADERRQGLE-------DGSANINFADTTEGASFSLSEVLGEVLAGVDSGAIASLLCDALEAYAAEDEIAPRDRDGETRKYSNYNSDEEEQLRTL-----------------------------AGSQGLFWRRLEQRMEDIERDERREESGWQGAQGDRGQLRRRGLGLSIEQYHGGGGXXXXXXXXXHGHRSAAPDAVSELSELLRIFQLLATYSLLSAKNSAALEALVFPAALSRRRLIVSR----------------SIDIHNSFAFLVLVWG-SRACDYVRLIGVLARENASFIAAHVREQYRCEKERREG 786          
BLAST of mRNA_H-elongata_contig12469.1863.1 vs. uniprot
Match: A0A6H5KWW9_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWW9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.680e-8
Identity = 63/165 (38.18%), Postives = 73/165 (44.24%), Query Frame = 0
Query:  837 MLSCYTPFLLAIVKRRASEDPDS--------------------------------------GDTPDVSPGSREAQDGH-----------GGVYP----RSEEGSVGGAVGHAR-------CPPSLCAEALWALSEYAVLSPGLAAAEVLPVAEALARNTVEHPQV 941
            MLSCYTPFLLAIV+RR ++   +                                      GD  +   GS    D H           GG       R + G   GA   A        CP +LC EAL ALSEYAVLS GLAAAEVLP+AE LA +T+EHPQV
Sbjct:    1 MLSCYTPFLLAIVRRRVADTAAARNVTAEKGAATKAEXXXXXXXXXXXXXXXXASAGGAADGDCDEARVGS--GGDAHDETRLHVVQQDGGKVEATDFRKDGGQGRGATTAASVSLPASSCPRALCTEALRALSEYAVLSAGLAAAEVLPLAEGLASDTLEHPQV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12469.1863.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKW2_ECTSI2.650e-14839.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3C3_9PHAE1.170e-6131.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWW9_9PHAE1.680e-838.18Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 810..830
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 125..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12469contigH-elongata_contig12469:950..7480 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12469.1863.1mRNA_H-elongata_contig12469.1863.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12469 920..7480 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12469.1863.1 ID=prot_H-elongata_contig12469.1863.1|Name=mRNA_H-elongata_contig12469.1863.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=948bp
MVAQPGFTKKRGGCRQHLVQTLVEAAPGPVPPSALSPMLRARETGPSVGD
LALEILERVADGNGRSSLDGESMGAPKKAILELFHVLVEEVVASGTGKRG
KSAATRGGPPGHLLSFLVRARTVLPAHVLVFSKELLALADSRWSAARKLS
IAVLGLILELGGACSETIDQALASVLQFARTDSDATVRAAAFDCVVDFLD
GSYERVLSRAVRDPDQSLRWWVRYFNALRQVLLPTSLHYILCQADEGEGR
ASGRGIVASDVNSSDDIPNDGPPDDGSRAHGRGHSSGAHIHTMQTNMGPD
EKDDGERPGKRRDIVEPWAVGGVLLTCLSVSAEAPLVDGSKVVRAKAIAC
SLRILDAYGGGIGREGHCHKTVGEVGEKFHNSNRTTARVLSIVRSGVVRG
ACVALEAVASESCVGATTQSASSPGLAGSGKTRRVVDAARDLLSLTCVTP
TPIDLLVCYTRCGNASGATTAPAAEAKRAIRDVVVKRFCSDIGSLLKMIS
TVMKAKYREGTEADPEESFDSTGRGNDRHLEGCSSDSPSEVLCELLAGVD
TEALTRLLGAALEAYSGVGNGVNSDHSGEPSNFSAGTDVPVLLRTLVLLG
EAKGLTTGATTGPGRTESLDQDHLLASRIGHFWRRLEQRMWDIERYEAGP
TCSGRSNNRGVEVDDDDEMAASNAVPECAELLRLFRLLATRSLLSQEDRV
ALEDLVFPSALSRRRLILPAVSLALALDEPHRLLLSSLAVLQDAAFYRTS
TDVGRACNYVRLIGVMARENASFITAHVRKQYGRLADRRIGQGDLQEEAT
QRDLEDGEDYMAEVSNREAMEREIRDLREASVTSDGMLSCYTPFLLAIVK
RRASEDPDSGDTPDVSPGSREAQDGHGGVYPRSEEGSVGGAVGHARCPPS
LCAEALWALSEYAVLSPGLAAAEVLPVAEALARNTVEHPQVHMITLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold