prot_H-elongata_contig124678.1862.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124678.1862.1
Unique Nameprot_H-elongata_contig124678.1862.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length170
Homology
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: D7G5L0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L0_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 2.860e-97
Identity = 142/161 (88.20%), Postives = 151/161 (93.79%), Query Frame = 0
Query:    4 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGL 164
            NIVKVVAGWGHSAALT DGQLYVCGRNYQGQLGLG+PQ FPQNERGHPFQADFCLIDRL HLKI+QIACGGEHSVAVA+NGEVWSFGAGQKGQLGHESTTRED+PRLVQALK TRREI+HVACGNNCTLVLAGGVAFP+LFE  A+V+RGNP+L  DV  L
Sbjct:  492 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKSTRREIMHVACGNNCTLVLAGGVAFPTLFEMTASVVRGNPRLWEDVESL 652          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A6H5JJV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV9_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.360e-96
Identity = 145/161 (90.06%), Postives = 153/161 (95.03%), Query Frame = 0
Query:    4 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGL 164
            NIVKVVAGWGHSAALT DGQLYVCGRNYQGQLGLG+PQ FPQNERGHPFQADFCLIDRL HLKI+QIACGGEHSVAVA+NGEVWSFGAGQKGQLGHESTTRED+PRLVQALKRTRREI+HVACGNNCTLVLAGGVAFP+LFE  AAV+RGNP+L  DVG L
Sbjct:  879 NIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQALKRTRREIMHVACGNNCTLVLAGGVAFPTLFEMTAAVVRGNPRLWEDVGSL 1039          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: F0Y909_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y909_AURAN)

HSP 1 Score: 199 bits (507), Expect = 3.990e-60
Identity = 94/159 (59.12%), Postives = 117/159 (73.58%), Query Frame = 0
Query:    7 KVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADVGGLV 165
            +VVAGWGH+A LT +G  YVCGRN+QGQLGLG+P+ FP NERGHP+Q DF L+DRL   ++ QIACGGEHSVA+ ++GEV S GAG KGQLGH +   E +PR+V  LK +RR++L VACGNN TLVL G    PSLF+  A VI  +P    DV  ++
Sbjct:  179 RVVAGWGHTALLTAEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASRRDVLEVACGNNGTLVLCGYFNPPSLFDCCAEVICADPDRFDDVDAIL 337          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S2FHZ6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHZ6_9STRA)

HSP 1 Score: 204 bits (520), Expect = 6.900e-59
Identity = 93/154 (60.39%), Postives = 117/154 (75.97%), Query Frame = 0
Query:    4 NIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 157
            N+ +VVAGWGHSAALT  G++ +CGRN+QGQLGLG+PQ FP+NERGHP+QA F  +D+L   K+ QIACGGEHSVA+ + G+V++FGAG KGQLGH     E +P L+  LK+TRR++  VACGNNCTL+LAG    PSL +R   VIR  P L
Sbjct:  571 NVRQVVAGWGHSAALTVSGEVLICGRNFQGQLGLGDPQDFPKNERGHPYQAQFITLDKLDGQKVIQIACGGEHSVALTECGDVYTFGAGNKGQLGHGGLANEHFPALLTDLKKTRRDVHQVACGNNCTLILAGYFNPPSLLQRCTEVIRSTPAL 724          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S4E565_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E565_9STRA)

HSP 1 Score: 197 bits (502), Expect = 8.660e-57
Identity = 91/145 (62.76%), Postives = 112/145 (77.24%), Query Frame = 0
Query:    7 KVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVI 151
            +VVAGWGH+A LT DG  YVCGRN+QGQLGLG+P+ FP NERGHP+Q DF L++ L+  ++ Q+ACGGEHSVA+  +GEV+S GAG KGQLGH S   E +PRLV  LK TRR++L VACGNN TLVL G    P+LF+R A V+
Sbjct:  479 RVVAGWGHTALLTADGACYVCGRNFQGQLGLGDPEAFPHNERGHPYQPDFRLVETLARKRVAQVACGGEHSVALTADGEVYSCGAGNKGQLGHGSGENEQFPRLVARLKATRRDVLEVACGNNGTLVLCGYFEPPTLFDRCAEVL 623          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S2HV15_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV15_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.840e-56
Identity = 99/157 (63.06%), Postives = 121/157 (77.07%), Query Frame = 0
Query:    5 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVA--DNG-EVWSFGAGQKGQLGHEST-TREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 157
            I +VVAGWGHSA LT  G++ +CGRNYQGQLGLG+P+ F +NERGHPFQA F ++DRL   ++ QIACGGEH+VA+   +NG +V+SFGAG KGQLGH +    E++PRLV  LKRTRR I  VACGNNCT++LAG    PSLF+RA  VIRG P L
Sbjct:  500 IRQVVAGWGHSAVLTVSGEVLICGRNYQGQLGLGSPEEFQKNERGHPFQAKFEVLDRLDGDRVAQIACGGEHTVALCKEENGSKVFSFGAGNKGQLGHGTPLANENFPRLVIDLKRTRRNIHQVACGNNCTVILAGTFNPPSLFDRAIEVIRGTPGL 656          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S1XMC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMC2_9STRA)

HSP 1 Score: 189 bits (480), Expect = 3.270e-54
Identity = 84/157 (53.50%), Postives = 110/157 (70.06%), Query Frame = 0
Query:    5 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKLCADV 161
            +  VVAGWGHSA LT  G++Y+CGRN+QGQLGLG+P +FP NERGHPFQ+ F  +  L HL++RQ++CGGEHSV +    EV++FG G +GQLGH  +  E+YPR ++ + RT R++LH ACGNN TL+L G     SL+      IR N  L A V
Sbjct:  308 VTDVVAGWGHSAVLTAAGEVYICGRNFQGQLGLGSPDKFPLNERGHPFQSVFVRLHTLGHLRVRQVSCGGEHSVCIDGRNEVYTFGLGAQGQLGHTDSESENYPRRLEVMLRTHRQVLHAACGNNSTLLLTGPTVIRSLYHLCIDAIRKNEVLYALV 464          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: W7TK43_9STRA (Regulator of chromosome condensation-like protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TK43_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.970e-50
Identity = 84/160 (52.50%), Postives = 107/160 (66.88%), Query Frame = 0
Query:    1 PPQNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLS---HLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAVIRGNPKL 157
            PP  I KV+AGWGHSA +  +G +Y+CGRN+QGQLGLG+P+ F +NER HP+ A F +I  L      K++Q ACGGEHS A+ +N EV++FGAG +GQLGH  +  E YPRL Q ++ TRR I  VACGNNCT++L G    P L E     I  N  L
Sbjct:  230 PPLRIQKVIAGWGHSAVVCGNGDVYICGRNFQGQLGLGDPKNFERNERNHPYLAHFRVITDLQTGGQQKVKQFACGGEHSAALLNNDEVYTFGAGARGQLGHGDSRNEAYPRLNQTMRATRRVIKDVACGNNCTVMLVGAHRIPPLTEYCLEFITQNWSL 389          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A835Z9L6_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 2.810e-43
Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 0
Query:    3 QNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLIDRLSHLKIRQ-----------IACGGEHSVAVADNGE-VWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCT 131
            + +V VVAGWGHSAALT  GQLY+CGRNY+GQLGLG+P  F QNERGH +QA F  ++ LS+ ++ Q           I+CGGEHS  +   G  ++SFGAG KGQLGH +   E  PR V+AL  T R +LHVACGNNCT
Sbjct:  534 KGVVAVVAGWGHSAALTASGQLYICGRNYKGQLGLGDPVLFQQNERGHHYQAHFQQLEDLSYERVTQAVLCYAAHTSQISCGGEHSAVITQGGSTIYSFGAGHKGQLGHGNCMNEYRPRRVEALMSTHRTLLHVACGNNCT 674          
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Match: A0A7S0C718_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C718_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.050e-38
Identity = 66/142 (46.48%), Postives = 94/142 (66.20%), Query Frame = 0
Query:    5 IVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGHPFQADFCLID-RLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHESTTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFE 145
            + +V+AGWGHSA +T DG+L+ CGRN+QGQLG G+P     N RGHP+Q +F  +   LS  +IR I+CGGEHSV + ++G+++SFG G KGQLG  S   + YP  V   +   R I+ V  GN+ +++L    + PSLF+
Sbjct:   23 VSQVIAGWGHSALVTVDGKLFTCGRNFQGQLGRGDPDFSHVNVRGHPYQPEFRRVTGELSGHRIRHISCGGEHSVVLTEDGKLFSFGKGHKGQLGISSCKSQSYPTRVYVPEHRNRPIIQVVSGNDFSIILRKHYSIPSLFD 164          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124678.1862.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5L0_ECTSI2.860e-9788.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJV9_9PHAE1.360e-9690.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y909_AURAN3.990e-6059.12Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2FHZ6_9STRA6.900e-5960.39Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4E565_9STRA8.660e-5762.76Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2HV15_9STRA1.840e-5663.06Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XMC2_9STRA3.270e-5453.50Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7TK43_9STRA3.970e-5052.50Regulator of chromosome condensation-like protein ... [more]
A0A835Z9L6_9STRA2.810e-4356.03Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7S0C718_9STRA1.050e-3846.48Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 79..100
score: 39.39
coord: 11..29
score: 39.47
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 21..80
e-value: 1.1E-11
score: 45.2
coord: 83..134
e-value: 9.7E-14
score: 51.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 70..80
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 22..83
score: 12.997
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 84..137
score: 14.806
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 1..138
e-value: 1.3E-38
score: 134.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 3..134
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 4..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124678contigH-elongata_contig124678:296..1675 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124678.1862.1mRNA_H-elongata_contig124678.1862.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124678 296..1675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124678.1862.1 ID=prot_H-elongata_contig124678.1862.1|Name=mRNA_H-elongata_contig124678.1862.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp
PPQNIVKVVAGWGHSAALTKDGQLYVCGRNYQGQLGLGNPQRFPQNERGH
PFQADFCLIDRLSHLKIRQIACGGEHSVAVADNGEVWSFGAGQKGQLGHE
STTREDYPRLVQALKRTRREILHVACGNNCTLVLAGGVAFPSLFERAAAV
IRGNPKLCADVGGLVCCFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II