prot_H-elongata_contig12454.1845.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12454.1845.1
Unique Nameprot_H-elongata_contig12454.1845.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length123
Homology
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: D7G1Z5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Z5_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 6.970e-18
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 0
Query:    1 MIAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDMGGAEPLY 55
            MIA KIVSLCRGYA++LTVELG+CLEGRC EELPE  +GVIRLVN+D+  AEPL+
Sbjct:  577 MIAEKIVSLCRGYAKALTVELGICLEGRCDEELPETVMGVIRLVNVDIDMAEPLH 631          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: A0A835ZES7_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.540e-10
Identity = 27/47 (57.45%), Postives = 37/47 (78.72%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDM 48
            +AA IVS+CRG +  L+V+LG+ LEGR   ELPE+C+GV+RL  LD+
Sbjct:   58 VAAHIVSMCRGASNGLSVDLGIVLEGRARAELPERCLGVVRLNRLDL 104          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: A0A835YZD8_9STRA (EDR2_C domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD8_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.320e-8
Identity = 25/46 (54.35%), Postives = 38/46 (82.61%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLD 47
            IA++IVS+C G AR+LT+++GV LEGRC +ELPE+ +G + + +LD
Sbjct:   55 IASRIVSVCMGAARALTIDVGVTLEGRCDDELPERLLGCLTICHLD 100          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: A0A662YG75_9STRA (EDR2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YG75_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.260e-5
Identity = 22/53 (41.51%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDMGGAEPL 54
            +A ++V L  GY + L +++G  LEG+  +ELPE+ +G +RLV++D+G A  L
Sbjct:  599 VANRVVGLVSGYTKKLVIDMGFVLEGQSPDELPERLMGSVRLVHIDLGVATKL 651          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: W7U3Y4_9STRA (PX domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3Y4_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.550e-5
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRC-MEELPEKCVGVIRLVNLDM 48
            +A++IVSLCRGYA+ L VE+G+ L+G     ELPEK +G I + NLD+
Sbjct:  764 LASQIVSLCRGYAKYLQVEMGILLQGEDETAELPEKLLGTIGIRNLDI 811          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: T0RWT2_SAPDV (EDR2_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWT2_SAPDV)

HSP 1 Score: 51.2 bits (121), Expect = 5.310e-5
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDM 48
            IA+ IVSLCRGYA  L V+L + L+G    ELPE+  G +R  +LD+
Sbjct:  268 IASNIVSLCRGYAERLVVDLSLTLQGNSEAELPERIFGSVRFSHLDL 314          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: T0S061_SAPDV (EDR2_C domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S061_SAPDV)

HSP 1 Score: 50.4 bits (119), Expect = 9.000e-5
Identity = 23/53 (43.40%), Postives = 35/53 (66.04%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDMGGAEPL 54
            +A K+ S+CR    SLTV++G+ LEG+  +ELPE  +G ++   LDM  A P+
Sbjct:  224 VARKVTSMCRMCVSSLTVDIGLVLEGQKEDELPEAMLGCVQYDRLDMANATPI 276          
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Match: A0A067BR04_SAPPC (EDR2_C domain-containing protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BR04_SAPPC)

HSP 1 Score: 50.4 bits (119), Expect = 9.850e-5
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    2 IAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDM 48
            IA+ IVSLCRGYA  L V+L + L+G    ELPE+  G +R  +LD+
Sbjct:  265 IASNIVSLCRGYAERLVVDLSLTLQGNSDVELPERIFGSVRFSHLDL 311          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12454.1845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G1Z5_ECTSI6.970e-1876.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZES7_9STRA6.540e-1057.45EDR2_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A835YZD8_9STRA1.320e-854.35EDR2_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A662YG75_9STRA3.260e-541.51EDR2_C domain-containing protein n=2 Tax=Nothophyt... [more]
W7U3Y4_9STRA4.550e-554.17PX domain-containing protein n=2 Tax=Monodopsidace... [more]
T0RWT2_SAPDV5.310e-551.06EDR2_C domain-containing protein n=1 Tax=Saprolegn... [more]
T0S061_SAPDV9.000e-543.40EDR2_C domain-containing protein n=1 Tax=Saprolegn... [more]
A0A067BR04_SAPPC9.850e-551.06EDR2_C domain-containing protein n=2 Tax=Saprolegn... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009769Protein ENHANCED DISEASE RESISTANCE 2, C-terminalPFAMPF07059DUF1336coord: 2..47
e-value: 2.4E-10
score: 40.9
NoneNo IPR availablePANTHERPTHR12136:SF47ENHANCED DISEASE RESISTANCE PROTEIN (DUF1336)coord: 2..56
NoneNo IPR availablePANTHERPTHR12136STEROIDOGENIC ACUTE REGULATORY PROTEIN STARcoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12454contigH-elongata_contig12454:3494..4359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12454.1845.1mRNA_H-elongata_contig12454.1845.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12454 2814..5593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12454.1845.1 ID=prot_H-elongata_contig12454.1845.1|Name=mRNA_H-elongata_contig12454.1845.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=123bp
MIAAKIVSLCRGYARSLTVELGVCLEGRCMEELPEKCVGVIRLVNLDMGG
AEPLYAPEPKTPPAASEGVSLSASDKRDPAFEGSGAAIVAEHSDLLAGEG
KAPEPVVENPTEKIGDEVAVKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009769EDR2_C