prot_H-elongata_contig12446.1834.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12446.1834.1
Unique Nameprot_H-elongata_contig12446.1834.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length737
Homology
BLAST of mRNA_H-elongata_contig12446.1834.1 vs. uniprot
Match: D8LQ84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ84_ECTSI)

HSP 1 Score: 510 bits (1314), Expect = 3.390e-167
Identity = 366/806 (45.41%), Postives = 456/806 (56.58%), Query Frame = 0
Query:    1 KVRVVQRVTRLLRVSRAVD--GGIAQQEVDVK---DAIADTSSSLLRWAE---AAAAPPNE---RKIFPTELLDACRGYAEALATADPERFASDCQSLAPPVAAALLLNTAHASPYQASSGASVSFLASAGIGGRVASPAPTEAMMGAQQPVGGIKEIKTLELWMEMLGLCLLPFCDGGGVEDGRLLEGL------DGSDXXXXXXXXXXXPEDDEGG---------------IGGDRPEAGRGGWRVLWQARGAWT--ESPECPFDVRPGGEKEDLPCRLATAVASLVKTAAAASVPSSTAVLAILCAFTTANGCSP------------EIHELVAKEAFSSLISVARIAPENSAQAECIKVALVSLRECVQATRLSTLEGWVPSALSTLETVPSRLKKLLTRSRGEGPKTYATARSFCREALAAAVACARALIRRAGASVLAADPLWFLRDFVVAMASPLLLADAVKALHAAS-----EGSPGQDGEQ--------GEVTHALRNVVLPGAVDRVTKALGNLERYSAGAAKEVLRAVAQLVRAASGE-ILPHRNRLGVAIVRCATSGGRGRSRAG-VEADENLRLCLRAIRGMLSA-------------SSEDAKKKGVETSPDAAQPFAEAALDVAVSVVEREWGGGAKTRGDRGGTKDGSGMGSDGESIAVIVEAHATLVDLLRS-DLRVPALDPDGEWPSQAKRLAKVAWAFSDRLQEAAGGAGAMRSPLADDDVILLCQGAEVLEALANRGGDFFQGGE-RFSFFTGELAQVLTTLRDTQGDDINTALHPVILDACAWVR 730
            K + VQ V + ++ S  V   G     E   +   + I++TS  +L W E   AAAA P+    R++FP  LL +C  Y EALATA P RF++DC+SLA PVA+ +L+ T  A  + ++ G +V    + G G       P+ +          I+E   LELW+EMLG+CLLPFC  GG        GL      D  +           P D +                 + GD     R  W   W  R   T  E  ECPFDVRPGG  ED+P RLAT ++   + AA+AS P+S +                            E H LV +EAFS L+ ++   PE+SAQAEC+K ALVSL+EC Q+ RL  LE  VP+ALS LE VPSRLK LLTRS+ +G K Y+TARSFCREAL AAVACAR LI   G  V+  DP WFL  FVV MASPLLL DAV AL AAS      G+  + GE+          +  ALR VVLPGAV R+ KALGN++RYSA AAKEVL+A A L RAA  E I PHRNRLG+A+V CA S GR     G VE DE +RLCLRAIR + +A             ++ D      +  P AAQ F EAAL+    VVEREW G    RG+RG  + G G     ESI  +VEAH TLV LLRS  + VP + PDGEWP  AKRLAK+AWA + R+++AAG   +  + LADDDV+LLCQG EVLEAL    G+FF+G   +  FF G+L+ VLTTLR     D NT +HPV+ DAC+WVR
Sbjct:   17 KAQAVQSVAKQIKSSSQVHLKGAAGTDEAATRTLDETISETSRRVLAWVECAAAAAAAPHSSDGRRVFPPVLLTSCCRYMEALATAYPARFSADCRSLARPVASCVLVMTRTAKAHDSAIGVAVPCRETKGEGEENDDGFPSRSGRTIT-----IEERNALELWVEMLGICLLPFCGSGGGSRTTSRSGLGEATSGDDDNSRDPSGEHGDDPFDSDXXXXXXXXXXXXXXGSRVSGDGKARSR--WVAGWMRRAGITLAEPLECPFDVRPGGRDEDMPVRLATLISYHAQAAASASRPASVSXXXXXXXXXXXXXXXXXXXXXXXXXTPSESHALVVEEAFSCLLCLSETVPESSAQAECVKAALVSLKECAQSARLRCLEHRVPAALSMLEGVPSRLKLLLTRSKSQGAKVYSTARSFCREALTAAVACARKLIGLVGGLVVMDDPRWFLETFVVKMASPLLLGDAVGALRAASLAARGMGTAAEGGEERGPDGSTPSGMETALREVVLPGAVGRLIKALGNIDRYSAAAAKEVLKATAWLARAAGAEEIRPHRNRLGMALVECAASVGRASGAGGGVERDEKVRLCLRAIRRLGAAXXXXXXXXXXXXPAAGDVLAAASDREPAAAQQFTEAALEFTCGVVEREWVG---KRGERGEQEGGDGQ----ESIITLVEAHVTLVALLRSPSMCVPGIGPDGEWPPAAKRLAKLAWAVAYRVRKAAGAVESSMA-LADDDVMLLCQGLEVLEALEECSGEFFEGKRSKMRFFEGDLSPVLTTLRGCH--DKNT-MHPVVYDACSWVR 804          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12446.1834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ84_ECTSI3.390e-16745.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12446contigH-elongata_contig12446:2798..8531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12446.1834.1mRNA_H-elongata_contig12446.1834.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12446 2798..8531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12446.1834.1 ID=prot_H-elongata_contig12446.1834.1|Name=mRNA_H-elongata_contig12446.1834.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=737bp
KVRVVQRVTRLLRVSRAVDGGIAQQEVDVKDAIADTSSSLLRWAEAAAAP
PNERKIFPTELLDACRGYAEALATADPERFASDCQSLAPPVAAALLLNTA
HASPYQASSGASVSFLASAGIGGRVASPAPTEAMMGAQQPVGGIKEIKTL
ELWMEMLGLCLLPFCDGGGVEDGRLLEGLDGSDDGTDDGEDDSEPEDDEG
GIGGDRPEAGRGGWRVLWQARGAWTESPECPFDVRPGGEKEDLPCRLATA
VASLVKTAAAASVPSSTAVLAILCAFTTANGCSPEIHELVAKEAFSSLIS
VARIAPENSAQAECIKVALVSLRECVQATRLSTLEGWVPSALSTLETVPS
RLKKLLTRSRGEGPKTYATARSFCREALAAAVACARALIRRAGASVLAAD
PLWFLRDFVVAMASPLLLADAVKALHAASEGSPGQDGEQGEVTHALRNVV
LPGAVDRVTKALGNLERYSAGAAKEVLRAVAQLVRAASGEILPHRNRLGV
AIVRCATSGGRGRSRAGVEADENLRLCLRAIRGMLSASSEDAKKKGVETS
PDAAQPFAEAALDVAVSVVEREWGGGAKTRGDRGGTKDGSGMGSDGESIA
VIVEAHATLVDLLRSDLRVPALDPDGEWPSQAKRLAKVAWAFSDRLQEAA
GGAGAMRSPLADDDVILLCQGAEVLEALANRGGDFFQGGERFSFFTGELA
QVLTTLRDTQGDDINTALHPVILDACAWVRRDSLVL*
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