prot_H-elongata_contig12445.1833.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12445.1833.1
Unique Nameprot_H-elongata_contig12445.1833.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length463
Homology
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: D8LNG9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG9_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 1.500e-194
Identity = 309/479 (64.51%), Postives = 349/479 (72.86%), Query Frame = 0
Query:    1 MNDLANIRRRRWEKLAAESKSASAAPESADGDDNEVKVGGQNDERNDESVI--IPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDRHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDEAIAATGGVAR---------TADEVLGPELRELADRTAVMISNCIARLSTRQRVDLIRRCGEPPKVGNSSLSNYRKLSFWLPSALALAGGASGGAAFEPSATIATGGVGARVGGTDGRERRAAMFRSRSLRQRLAEACEAVMESDAVMGSTSSRRERGLRRLFCAPGMG-------RRGRGNGFLSSTTHSVILIVGIFAAMLAYQRYIK 461
            M D+ NIRRRR E L   S +A+ A  + + D          +  +DE+    IPSEFECILCLRLYHEPVSLPCGHTYCRGCLKR+LA K+QCPMCRAACH GAGDCGTNLAMV+IIKSQF  QYE RE EAE DA+VEAE RRRA  IG+SVTPAPDGSV MPVCLLD++LFP QPVTLYLFEPRYIT+VNRCLS TRRF +F D+ P+TG SGAILEISDARMMN GQYL+MCRGVGRC S +EF+ E GT GLR+A VSPFEDD                     TADEVLGPELR+LADRT+V++ +C+ARLSTRQ++ LIRRCGEPPKVG SSL++YRKLS+WLPSALALA     G                           AAMFR+RSLRQRL+EACE VMES+AV GSTSSRRERGLR+LF  P  G           G GFLSST +SVILIVGIFAAM+AYQR  K
Sbjct:    1 MADVTNIRRRRLEALEESSPAAAGASPALEVDSGGTTKAAARNAPDDEATACTIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRALANKTQCPMCRAACHLGAGDCGTNLAMVSIIKSQFGRQYEERENEAEHDAMVEAETRRRAHTIGESVTPAPDGSVLMPVCLLDMLLFPLQPVTLYLFEPRYITMVNRCLSSTRRFAVFQDQSPSTGLSGAILEISDARMMNRGQYLIMCRGVGRCNSSAEFEVEAGTGGLRHARVSPFEDDXXXXXXXXXXXXXXXXXXRRVTADEVLGPELRDLADRTSVVVFDCLARLSTRQKISLIRRCGEPPKVGRSSLNSYRKLSYWLPSALALA---DAGGXXXXXXXXXXXXXXXXXXXXXXXXXXAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLFAPPPSGLXXXXXXXXXHGQGFLSSTRNSVILIVGIFAAMVAYQRISK 476          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A6H5L2U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U3_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.050e-70
Identity = 143/237 (60.34%), Postives = 160/237 (67.51%), Query Frame = 0
Query:  239 RCISCSEFDAEEGTEGLRYAHVSPFEDDDEAIAATGGVAR---------TADEVLGPELRELADRTAVMISNCIARLSTRQRVDLIRRCGEPPKVGNSSLSNYRKLSFWLPSALALAGGASGGAAFEPSATIATGGVGARVGGTDGRERRAAMFRSRSLRQRLAEACEAVMESDAVMGSTSSRRERGLRRLFCAPGMG-----RRGRGNGFLSSTTHSVILIVGIFAAMLAYQRYIK 461
            RC S +EF+ E GT GLRYA VSPFEDD                     TADEVLGPEL +LADRT+V+I +C+ARLSTRQ++ LIRRCGEPPKVG SSL++YRKLSFWLPSALALA    G                  V     RERRAAMFR+RSLRQRL+EACE VMES+AV GSTSSRRERGLR+LF  P  G         G GFLSST +SVILIVGIFAAM+AYQR  K
Sbjct:   16 RCNSSAEFEVEAGTGGLRYARVSPFEDDXXXXXXXXXXXXXXXXXXRRVTADEVLGPELMDLADRTSVVIFDCLARLSTRQKISLIRRCGEPPKVGRSSLNSYRKLSFWLPSALALAD--VGXXXXXXXXXXXXXXXXXXV--AXARERRAAMFRNRSLRQRLSEACEVVMESEAVTGSTSSRRERGLRKLFAPPPSGLXXXXXXXHGQGFLSSTRNSVILIVGIFAAMVAYQRISK 248          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A835YVY5_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY5_9STRA)

HSP 1 Score: 214 bits (546), Expect = 4.980e-62
Identity = 117/269 (43.49%), Postives = 155/269 (57.62%), Query Frame = 0
Query:   52 IPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDV-ILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDRHPATGSSGAILEISDARMMN-----------------------------------GGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDEAIAATGGVARTADEVL 284
            IPS+FEC LCLRL++EPVS+ CGH+YCRGCL+R+L  K+ CP+CRA  H GA D   NLAMV+ I+   A +Y AR +EA  DA  EA   +RA+ +G+  T  PDGSV M V +    ++FP QP+TL+++EP+Y+ +V RCLSG RRFV+   R    GS G +++I DARM+                                    GGQYL+   GVGRC+  S   AE    GLR A + P +DDD+A   T   A    +VL
Sbjct:   82 IPSDFECSLCLRLFYEPVSIACGHSYCRGCLRRALRFKASCPICRAPLHAGAADAAANLAMVSFIQRDCAAEYAARAREAAADAAEEAAAAKRALTLGEDATLLPDGSVQMEVFVDRYSLVFPGQPITLFVYEPQYVIMVTRCLSGGRRFVM--QRAAERGSVGTVVQIDDARMLGRLWMPETVSTRAASALRSAPPLQRSDPPSELRGRGGGQYLLQAHGVGRCVCVSALVAEAEAHGLRSASIVPLDDDDDAPDGTAADAALPRDVL 348          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A7S2XUD8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUD8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 9.350e-40
Identity = 108/328 (32.93%), Postives = 161/328 (49.09%), Query Frame = 0
Query:   34 NEVKVGGQNDERNDESVIIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQ----DAVVEAEERR----RAVAIGDSVTPAPDGSV---SMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDR-HPATGSSGAILEISDARMMNGG--QYLVMCRGVGRCI--SCSEFDAEEGTEGLRYAHVSPFEDDDEAIAATGGVARTADEVLGPELRELADRTAVMISNCIARLSTRQRVDLIRRCGEPPKVGNSSLSNYRKLSFWLPSALAL 345
            NE + G        E   +P E EC LCL+L +EPVSLPCGH++CR CL+R+L  K +CP+CRAAC  GA     N+A+     S+  + + AR++E E+    D   +A+  R    R+ A   S     +GS    ++P+ L  + L P+QP+    FEPRY+ +V R L+G R F + P       G  G ++ +   + + G   +Y+V  +   R      S    E GT GL YA V P++D  +            D  L P ++EL+     + S  +  L    +  L+  CG  P  G      +++LSFWL SAL L
Sbjct:    2 NEEEQGKDASSSEQEVEEVPQELECTLCLKLLYEPVSLPCGHSFCRRCLRRALTYKKECPLCRAACLPGAASNAVNIALETFASSRLPKAWAARKQECEEEDDEDRQADAQAARVLSGRSQASPASAAVPEEGSGVSHTVPLFLFPLQLVPHQPMIFQFFEPRYVVMVERLLAGNRLFGLQPSASEDRDGPPGLLMMVEQCQQIPGPHTRYVVQTKVASRYTIQDPSSIVEEPGTMGLHYATVQPYDDIQD------------DASLSPRVKELSLEAWDLTSTLLDSLPNHAKRMLLHMCGPLPSRGQ-----HKRLSFWLASALRL 312          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A7S1G500_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G500_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.250e-30
Identity = 76/213 (35.68%), Postives = 116/213 (54.46%), Query Frame = 0
Query:   54 SEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLD-VILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDRHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFED 265
            ++F+C +C  L  EPV+L CGHTYCR CL+ +L +   CPMCRA  +  A +   N+ +  +I+ +F  +  AR  E       EAEE R A A              +P+ + + ++++P QPVT  +FEPRY  +V RC+ G+RRF +     PA+ + G ++EI+  R ++ G   + CR   R  + +    EEGT GL YA +   ED
Sbjct:   26 ADFDCSICFNLLLEPVTLGCGHTYCRRCLRNALRVNRHCPMCRAPTYVAANEQPANVLLTRLIERKFPAELAARRAE-------EAEEVREAEAD------------RLPIFVQEGLLVYPTQPVTFNIFEPRYRIMVQRCMEGSRRFGL--QTTPAS-TVGVVVEINSVRQVSVGVLQIGCRARSRYRTRATAAVEEGTGGLLYADIELLED 216          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A7S0CSC1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CSC1_9EUKA)

HSP 1 Score: 118 bits (296), Expect = 2.840e-26
Identity = 74/288 (25.69%), Postives = 133/288 (46.18%), Query Frame = 0
Query:   56 FECILCLRLYHEPVSLPCGHTYCRGCLKRSLA-IKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFP---DRHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDEAIAATGGVARTADEVLGPELRELADRTAVMISNCIARLSTRQRVDLIRRCGEPPKVGNSSLSNYRKLSFWL 339
             +C LCL +  EP+++PCGHT+CR CL  ++   K +CP CRA CH        N+ + NI +  F ++Y+ R +E +              A+            ++P+   +  LFP   + L+LFE RY  ++NRC+S  R+F+  P   D     G  G +  + +   ++ G+ L+    V R +  + +  EEGT+GL Y     +E+ D+ +                +++E+  +      N I + +   R  ++   G+ P + N++     + SFW+
Sbjct:   30 LQCSLCLGIVCEPITIPCGHTFCRSCLYLAMQRTKKKCPNCRAVCHVDPSSHSVNVMLANIAQKCFPKEYKKRAEECK--------------ALKQKF------QTTLPIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRQFLYLPNFSDYKATAGDVGLLAYVDECEFLSDGRALLKATLVKRVVITNSW-VEEGTQGLHYCQYQAYEETDKTVKEA-------------DVKEIHAKV-----NVILQSAPGLREQIVNHIGKQPPISNAT-----QFSFWI 273          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A250WWE3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWE3_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 8.640e-26
Identity = 92/323 (28.48%), Postives = 143/323 (44.27%), Query Frame = 0
Query:   55 EFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDRHPATGSSGAI-LEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDE---------------------AIAATGGVARTADEVLGPELRELADRTAVMISNCIARLSTRQRVDLIRRCGEPPKVGNSSLSN------------YRKLSFWLPSAL 343
            + EC LC++L  EPV+ PCGHT+CRGC  R++   ++CP+CR   H G       + + NII   F E+YE R  E   +          +    + V    DG++++P+ ++  +L P + + L +FEPRY  ++ R + G RR  +   R  ++     I +EI +      G+Y V   G  R    S  D +    G R A V PF DD E                     A+    G+   A+EVL       +   A+  ++   R + R R +L+ R G+PP + N    +            Y KLSFW  + L
Sbjct:  216 DLECTLCMKLLFEPVTTPCGHTFCRGCYARAMDHGNKCPLCRTVLHCGR-QLPVTVTLANIISRSFTEEYEERRAEEVAEXXXXXXXXSSSGQWDEGV--GSDGTLTLPLFVMSTLL-PGEKMGLNIFEPRYRLMIRRAMEGNRRIGMAEARSRSSIEEVLIEVEIQECNPQPDGRYYVEVEGRRRMKLVSSSDLD----GYRLARVKPFRDDVEEAAEQXXXXXXXAEGGEQGEGAVQREPGIVTLANEVLTSATEATSQLRAM--ASASPRAAARVR-ELLSRVGQPPTLPNHPSGSAEGGDSAARQLAYEKLSFWAANLL 527          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A6V3MPG8_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3MPG8_9EUKA)

HSP 1 Score: 112 bits (280), Expect = 5.340e-24
Identity = 66/217 (30.41%), Postives = 109/217 (50.23%), Query Frame = 0
Query:   58 CILCLRLYHEPVSLPCGHTYCRGCLKRSLA-IKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFP---DRHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDEAI 270
            C LCL L  +P+++PCGHT+CR CL  ++   K +CP CRA CH        N+ +  I +  F +QYE R  E++Q+     +E+  + +               P+   +  LFP   + L+LFE RY  ++NRC+S  R+F+  P   D    TG  G +  I +   +  G+ L+    + + +  +    EEGT+GL Y    P+ ++D+ +
Sbjct:   35 CPLCLNLVCQPITVPCGHTFCRVCLYMAMQRSKKKCPNCRAVCHVEPASHAVNVMLAQIAQKCFPKQYEQRLLESKQE-----QEKFESTS---------------PIFFYNNCLFPGCLLHLHLFEQRYRHMINRCVSSNRKFIYLPNFTDYKAKTGDVGLLAYIDECEFLPDGRALLKAT-IQKRVKVTNTWVEEGTQGLHYCQFHPYVEEDKTV 230          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: L8GS57_ACACA (Zinc finger, C3HC4 type (RING finger) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GS57_ACACA)

HSP 1 Score: 115 bits (287), Expect = 5.790e-24
Identity = 59/197 (29.95%), Postives = 108/197 (54.82%), Query Frame = 0
Query:   45 RNDESVIIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPDRHPATGSS------GAILEISDARMMNGGQYLVMCR 235
            R+++ V +  +FEC+LCL+++++PV+ PCGHT+CR CL R++   +QCP+CR   H  +    T + + NIIK  F ++Y  RE+EA+++ + +                       MP+  L+ +++P     +++FE RY  ++ RC++G + F +   R  ++GSS      G  LEI+   ++  G+  +  R
Sbjct:  116 RSEKEVTLSEDFECVLCLKVFYDPVTTPCGHTFCRSCLFRAMDHGTQCPLCRGVVHLSSNHPAT-VTLKNIIKRLFPDEYRQREEEAQKELIQD--------------------ETCMPLFPLNAVVYPGMRFPMHIFEARYRLMLRRCMAGAKTFGLINIRRDSSGSSWVPYDVGCTLEINKINILPDGRSYIDTR 291          
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Match: A0A6B2LCC5_9EUKA (RING-type domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCC5_9EUKA)

HSP 1 Score: 110 bits (275), Expect = 1.290e-23
Identity = 66/217 (30.41%), Postives = 106/217 (48.85%), Query Frame = 0
Query:   56 FECILCLRLYHEPVSLPCGHTYCRGCLKRSLA-IKSQCPMCRAACHGGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGDSVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRFVIFPD---RHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEEGTEGLRYAHVSPFEDDDE 268
             +C +CL +  EP+S+PCGHT+CR CL  +    + +CP+CRA C   A     N+ + +I+K+ F +QY  R KE E+                           ++P+   +  LFP   + L+LFE RY  ++ R L G R+FV  P+      + G  G + E+ + R ++ G+ L+  R V R +    +  E+GT  L Y     F+D+ E
Sbjct:    1 MDCTICLNMLVEPISVPCGHTFCRTCLVAAQQRAQKKCPVCRAVCVIDATAQKENVQLASILKTCFPKQYAERLKEVEE--------------------TKKTWKQNLPIFFFNDTLFPGGVLKLHLFEERYKLMIKRVLEGNRKFVYLPNFTNYKASKGDVGVVAEVLECRFLHDGRALLQARIVERAVVADSW-VEDGTGNLAYCQYELFKDEPE 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12445.1833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNG9_ECTSI1.500e-19464.51RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L2U3_9PHAE1.050e-7060.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVY5_9STRA4.980e-6243.49RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S2XUD8_9STRA9.350e-4032.93Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1G500_9STRA4.250e-3035.68Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S0CSC1_9EUKA2.840e-2625.69Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A250WWE3_9CHLO8.640e-2628.48Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A6V3MPG8_9EUKA5.340e-2430.41Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
L8GS57_ACACA5.790e-2429.95Zinc finger, C3HC4 type (RING finger) domain conta... [more]
A0A6B2LCC5_9EUKA1.290e-2330.41RING-type domain-containing protein n=1 Tax=Arcell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 57..95
e-value: 2.2E-8
score: 33.8
NoneNo IPR availableGENE3D2.30.130.40coord: 147..261
e-value: 3.3E-14
score: 54.5
NoneNo IPR availablePANTHERPTHR23327:SF42ZINC FINGER (C3HC4-TYPE RING FINGER) FAMILY PROTEINcoord: 36..338
NoneNo IPR availablePANTHERPTHR23327RING FINGER PROTEIN 127coord: 36..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 435..456
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..434
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 457..462
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 52..120
NoneNo IPR availableTMHMMTMhelixcoord: 434..456
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 58..95
e-value: 4.5E-7
score: 39.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 58..96
score: 12.489
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 44..146
e-value: 7.5E-20
score: 73.1
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 73..82
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 162..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12445contigH-elongata_contig12445:811..7702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12445.1833.1mRNA_H-elongata_contig12445.1833.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12445 811..8587 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12445.1833.1 ID=prot_H-elongata_contig12445.1833.1|Name=mRNA_H-elongata_contig12445.1833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=463bp
MNDLANIRRRRWEKLAAESKSASAAPESADGDDNEVKVGGQNDERNDESV
IIPSEFECILCLRLYHEPVSLPCGHTYCRGCLKRSLAIKSQCPMCRAACH
GGAGDCGTNLAMVNIIKSQFAEQYEAREKEAEQDAVVEAEERRRAVAIGD
SVTPAPDGSVSMPVCLLDVILFPNQPVTLYLFEPRYITLVNRCLSGTRRF
VIFPDRHPATGSSGAILEISDARMMNGGQYLVMCRGVGRCISCSEFDAEE
GTEGLRYAHVSPFEDDDEAIAATGGVARTADEVLGPELRELADRTAVMIS
NCIARLSTRQRVDLIRRCGEPPKVGNSSLSNYRKLSFWLPSALALAGGAS
GGAAFEPSATIATGGVGARVGGTDGRERRAAMFRSRSLRQRLAEACEAVM
ESDAVMGSTSSRRERGLRRLFCAPGMGRRGRGNGFLSSTTHSVILIVGIF
AAMLAYQRYIKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR015947PUA-like_sf