prot_H-elongata_contig124422.1831.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124422.1831.1
Unique Nameprot_H-elongata_contig124422.1831.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
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BLAST of mRNA_H-elongata_contig124422.1831.1 vs. uniprot
Match: D8LKD9_ECTSI (MABP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD9_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 6.270e-58
Identity = 107/153 (69.93%), Postives = 118/153 (77.12%), Query Frame = 0 
Query:    1 MCDSLDHVAEERFPLALSFFETLVRTSEGRLGPLALQRTFLGLSFLCSYACSSRGWVQAGSGDQGPLRDDDPALRSLKDLLRLVCRQVEIAEETRAALRRTRVAGTGVGVGTNRQLAAATPAAMAIPTWDSYTPMVHVRSGGD--ASWAATPD 151
            MCDSLDHV E+RFP+AL FFE LVRTSEGRLGPLALQRTF GLSFLC+Y CSSR WVQA  G +GPL DD+PA  +LKDLLRLVC QVEIAEE R A RR+R+ GTG     +  L A TP  MAIPTWD+YTPMV V+ GG   A WA TPD
Sbjct:  674 MCDSLDHVTEDRFPIALEFFEALVRTSEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNPAFSALKDLLRLVCGQVEIAEEAREAFRRSRMTGTGP----HGPLLATTPGIMAIPTWDTYTPMV-VKGGGREAAPWARTPD 821
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BLAST of mRNA_H-elongata_contig124422.1831.1 vs. uniprot
Match: A0A6H5KWN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN7_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 3.970e-37
Identity = 65/87 (74.71%), Postives = 72/87 (82.76%), Query Frame = 0 
Query:    1 MCDSLDHVAEERFPLALSFFETLVRTSEGRLGPLALQRTFLGLSFLCSYACSSRGWVQAGSGDQGPLRDDDPALRSLKDLLRLVCRQ 87
            +CDSLDHVAE+RFP+AL FFE LVR SEGRLGPLALQRTF GLSFLC+Y CSSR WVQA  G +GPL DD+ A  +LK LLRLVC Q
Sbjct:   46 ICDSLDHVAEDRFPIALEFFEALVRISEGRLGPLALQRTFRGLSFLCAYTCSSRRWVQASGGTKGPLEDDNRAFSALKYLLRLVCGQ 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124422.1831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKD9_ECTSI6.270e-5869.93MABP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KWN7_9PHAE3.970e-3774.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124422contigH-elongata_contig124422:251..1467 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124422.1831.1mRNA_H-elongata_contig124422.1831.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124422 245..1467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124422.1831.1 ID=prot_H-elongata_contig124422.1831.1|Name=mRNA_H-elongata_contig124422.1831.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MCDSLDHVAEERFPLALSFFETLVRTSEGRLGPLALQRTFLGLSFLCSYA
CSSRGWVQAGSGDQGPLRDDDPALRSLKDLLRLVCRQVEIAEETRAALRR
TRVAGTGVGVGTNRQLAAATPAAMAIPTWDSYTPMVHVRSGGDASWAATP
DQ
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