prot_H-elongata_contig124214.1821.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig124214.1821.1
Unique Name	prot_H-elongata_contig124214.1821.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	95

Homology

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A6H5KHP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP7_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.260e-49
Identity = 94/105 (89.52%), Postives = 95/105 (90.48%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MDEFNEPGSSKF+FLLSTRAGGLGINLATADVV          VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK
Sbjct:  584 MDEFNEPGSSKFLFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 688

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A448YY09_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY09_9STRA)

HSP 1 Score: 160 bits (406), Expect = 6.810e-44
Identity = 85/105 (80.95%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVVV----------DLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MDEFN  GSSKF+FLLSTRAGGLGINLATAD+VV          DLQAMDRAHRIGQ KPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+N SL+K
Sbjct:  304 MDEFNAEGSSKFLFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNTSLNK 408

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: F0YAG5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG5_AURAN)

HSP 1 Score: 159 bits (402), Expect = 7.440e-44
Identity = 84/105 (80.00%), Postives = 89/105 (84.76%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVVV----------DLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MD FN PGS KF FLLSTRAGGLGINLATAD+VV          DLQAMDRAHRIGQTKPV VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA+L K
Sbjct:  489 MDVFNAPGSEKFAFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAALGK 593

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: B7G2T7_PHATC (Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T7_PHATC)

HSP 1 Score: 160 bits (405), Expect = 1.050e-43
Identity = 84/105 (80.00%), Postives = 92/105 (87.62%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MDEFN  GSSKF FLLSTRAGGLGINLATAD+V          VDLQAMDRAHRIGQTKPV+VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+++SL+K
Sbjct:  517 MDEFNAEGSSKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQHSSLEK 621

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A1E7ETM7_9STRA (SNF2_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETM7_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.340e-43
Identity = 84/105 (80.00%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVVV----------DLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MDEFN  GS KF+FLLSTRAGGLGINLATAD+VV          DLQAMDRAHRIGQ KPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA++DK
Sbjct:  369 MDEFNAEGSPKFLFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAAVDK 473

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A7S2MKX3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MKX3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.130e-43
Identity = 83/105 (79.05%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MD FNEPGS  F FLLSTRAGGLGINLATAD+V          VDLQAMDRAHRIGQTKPV+VFRF+TEGTVE+KIVERADRKLFLDAAVIQQGRLAE+N  L K
Sbjct:   40 MDRFNEPGSPYFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVRVFRFVTEGTVEDKIVERADRKLFLDAAVIQQGRLAEQNNQLSK 144

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: F0YAG6_AURAN (Uncharacterized protein RUV1 n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAG6_AURAN)

HSP 1 Score: 159 bits (402), Expect = 2.660e-43
Identity = 84/105 (80.00%), Postives = 89/105 (84.76%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVVV----------DLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MD FN PGS KF FLLSTRAGGLGINLATAD+VV          DLQAMDRAHRIGQTKPV VFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+NA+L K
Sbjct:  489 MDVFNAPGSEKFAFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNAALGK 593

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: B8C3Q3_THAPS (Atpase-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q3_THAPS)

HSP 1 Score: 159 bits (401), Expect = 3.260e-43
Identity = 83/105 (79.05%), Postives = 90/105 (85.71%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            M+EFN PGSSKF FLLSTRAGGLGINLATAD+V          VDLQAMDRAHRIGQTKPV+VFRFI+EGTVEEKI+ERAD+KLFLDAAVIQQGRLAE+N  L K
Sbjct:  368 MEEFNAPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFISEGTVEEKIIERADKKLFLDAAVIQQGRLAEQNTKLSK 472

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BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A1Z5JHP3_FISSO (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHP3_FISSO)

HSP 1 Score: 159 bits (401), Expect = 3.660e-43
Identity = 84/105 (80.00%), Postives = 91/105 (86.67%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MDEFN  GS KF FLLSTRAGGLGINLATAD+V          VDLQAMDRAHRIGQTKPV+VFRFITEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+++SL+K
Sbjct:  525 MDEFNRVGSPKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFITEGTVEEKIIERADRKLFLDAAVIQQGRLAEQHSSLEK 629

[Close]

BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Match: A0A7S2BNI9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNI9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 4.440e-43
Identity = 83/105 (79.05%), Postives = 88/105 (83.81%), Query Frame = 0

Query:    1 MDEFNEPGSSKFIFLLSTRAGGLGINLATADVV----------VDLQAMDRAHRIGQTKPVKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK 95
            MD FNEP S  F FLLSTRAGGLGINLATAD+V          VDLQAMDRAHRIGQTKPVKVFRF+TEGTVEEKI+ERADRKLFLDAAVIQQGRLAE+N +L K
Sbjct:  121 MDRFNEPNSKYFAFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVKVFRFVTEGTVEEKIIERADRKLFLDAAVIQQGRLAEQNNNLSK 225

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot

BLAST of mRNA_H-elongata_contig124214.1821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KHP7_9PHAE	4.260e-49	89.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A448YY09_9STRA	6.810e-44	80.95	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
F0YAG5_AURAN	7.440e-44	80.00	Uncharacterized protein (Fragment) n=1 Tax=Aureoco...	[more]
B7G2T7_PHATC	1.050e-43	80.00	Imitation switch isoform 1, alias nucleosome remod...	[more]
A0A1E7ETM7_9STRA	1.340e-43	80.00	SNF2_N-domain-containing protein n=1 Tax=Fragilari...	[more]
A0A7S2MKX3_9STRA	2.130e-43	79.05	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
F0YAG6_AURAN	2.660e-43	80.00	Uncharacterized protein RUV1 n=2 Tax=Aureococcus a...	[more]
B8C3Q3_THAPS	3.260e-43	79.05	Atpase-like protein (Fragment) n=1 Tax=Thalassiosi...	[more]
A0A1Z5JHP3_FISSO	3.660e-43	80.00	SWI/SNF-related matrix-associated actin-dependent ...	[more]
A0A7S2BNI9_9STRA	4.440e-43	79.05	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..95 e-value: 2.7E-39 score: 137.0
None	No IPR available	PANTHER	PTHR10799	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED	coord: 1..90
None	No IPR available	PANTHER	PTHR10799:SF879	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A MEMBER 5	coord: 1..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 35..95
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..34
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig124214	contig	H-elongata_contig124214:513..1647 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig124214.1821.1	mRNA_H-elongata_contig124214.1821.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig124214 513..1650 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig124214.1821.1 ID=prot_H-elongata_contig124214.1821.1|Name=mRNA_H-elongata_contig124214.1821.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MDEFNEPGSSKFIFLLSTRAGGLGINLATADVVVDLQAMDRAHRIGQTKP
VKVFRFITEGTVEEKIVERADRKLFLDAAVIQQGRLAEKNASLDK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase