prot_H-elongata_contig124189.1818.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig124189.1818.1
Unique Nameprot_H-elongata_contig124189.1818.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 1.320e-56
Identity = 119/193 (61.66%), Postives = 135/193 (69.95%), Query Frame = 0
Query:   10 GESG----VDRLIAGDELESEVVLRADHRVRSFDFAPS-----ARSGRSRSRGA--------STRVLVALHNNSMEVWGVES-----ATAAASAEQGIGGEAKASCS--------RLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            GE+G     D ++AGDELES VVLR DHRVRSFDFAPS     +  GR   RG+        STRVLV+LHNNSMEVWG+E      A  A+   +G+  +              R+ +LDLQGHRSDVRAVA+SSD +MVASVSHGLAK WS+RTRQCVRS PCGFGLTVAFAPGDRHLLVGTKEGNLQV D
Sbjct:  370 GEAGRSTLTDSIVAGDELESSVVLRTDHRVRSFDFAPSMTASSSSGGRRGGRGSGSGGDGLDSTRVLVSLHNNSMEVWGLEGCCHAGAGKASKKAKGVDEDXXXXXXXXXXXXXXRMMVLDLQGHRSDVRAVAVSSDGAMVASVSHGLAKAWSARTRQCVRSAPCGFGLTVAFAPGDRHLLVGTKEGNLQVVD 562          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.510e-34
Identity = 83/166 (50.00%), Postives = 100/166 (60.24%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASC--------SRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            D +IAGDELE+  V+R+ H+ R               RGA  RVL+ALHNNS+E+W V +                            R++ LD  GHRSDVRAVAIS D  ++ASVS G AK W++RTRQC+R+ PCGFGL  AFAPGDRHLLVGTKEG LQV D
Sbjct:  359 DEVIAGDELEALAVVRSAHKTRD-------------GRGA--RVLLALHNNSLELWSVAAXXXXXXXXXXXXXXXXXXXXXXXXXVVERMSSLDAHGHRSDVRAVAISGDDQLIASVSKGEAKVWNARTRQCIRTTPCGFGLCCAFAPGDRHLLVGTKEGRLQVVD 509          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: E1ZIF0_CHLVA (Utp12 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIF0_CHLVA)

HSP 1 Score: 119 bits (297), Expect = 7.070e-28
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAP--SARSGRSRSRGASTRV---LVALHNNSMEVWGVESATAAASAEQGIGGEAKAS-------CSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            DRL AGDEL+    +R+ H+ RS    P  SA  G  R   AS+ V   ++AL NNS+EVW V             GGE             R  ++DL GHRSDVRA+A++SD S++ S S+   K W+ R+  C+R+VP G+GL   FAPG+RH +VGTKEG +++ D
Sbjct:  353 DRLTAGDELQLVAAIRSKHKARSCAVVPAASASGGAGRRAAASSHVASLVLALTNNSLEVWDVRE-----------GGEQXXXXXXXXXXADRAQVIDLPGHRSDVRALALASDDSLLLSASNNCVKVWNPRSGACLRTVPSGYGLCALFAPGNRHAVVGTKEGGIEIFD 511          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.470e-27
Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 0
Query:   17 LIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGV----------ESATAAASAEQGIGGEAKASCS---RLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCG-FGLTVAFAPGDRHLLVGTKEG 166
            LIAGDE+E   +LR+ H++RSF F  +   G+       TRVL+AL+NNS+EV  +          E+A+A  + E    G++  S S   R  ++D+ GHRSDVRAV+IS DA++VASVS    K W+ +T  CVRS   G   L  AFAPGDRH+++GT+EG
Sbjct:  374 LIAGDEIEFYALLRSPHKIRSFAFPQTGSDGKGH-----TRVLLALNNNSLEVHKLPMRHVLGGKSEAASALIAVEPVAEGKSDQSISMPVRTMVIDMHGHRSDVRAVSISKDAALVASVSAYSVKIWNRKTSNCVRSAAIGGLALCCAFAPGDRHVIIGTREG 532          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A3M7L422_AUXPR (Utp12 domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L422_AUXPR)

HSP 1 Score: 115 bits (288), Expect = 1.130e-26
Identity = 70/158 (44.30%), Postives = 96/158 (60.76%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASCSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            D + A DELE+  VLR+ H+VR+    P AR      RG +  +++AL NNS+EVW  E A        G  GE  A  +RLA+LD  GHR+DVRA+A++ D S+  S S    K W+ RT  C+R+V  G+G  + F PG+RH+++GTKEG L V D
Sbjct:  327 DEVTAQDELEALPVLRSKHKVRAAALVPGAR------RGGTLGLVLALANNSLEVW--ECA--------GRAGEDAAPPARLALLDAGGHRADVRALALAGDDSVAVSASTAGVKVWNPRTGSCLRTVEAGYGTALLFVPGNRHVVLGTKEGQLAVVD 468          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A2P6U020_CHLSO (WD repeat-containing 3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U020_CHLSO)

HSP 1 Score: 115 bits (288), Expect = 1.140e-26
Identity = 71/168 (42.26%), Postives = 93/168 (55.36%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLV-ALHNNSMEVWGV-ESATAAASAEQG--------IGGEAKASCSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            D + A DELE    +R+ H+ RS    P   +GR    G     LV AL NNS+E+W V E   AAA  E+G                  +   LDL GHRSDVRAVA++SD S+  S S+   K W+ RT  C+R++  G+GL   FAPG+RH LVGTKEG +++ D
Sbjct:  353 DHIQASDELELLAAVRSKHKARSVAVCPPGAAGRRAGAGGHVASLVLALTNNSLELWDVAEGGAAAADGEEGEXXXXXXXXXXXXXXXAEKAQTLDLAGHRSDVRAVALASDDSLALSASNNCVKVWNPRTGACLRTMDSGYGLCALFAPGNRHALVGTKEGTIEIFD 520          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A168KM37_ABSGL (Utp12 domain-containing protein n=2 Tax=Absidia TaxID=4828 RepID=A0A168KM37_ABSGL)

HSP 1 Score: 114 bits (285), Expect = 2.880e-26
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   21 DELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASCSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            DE++S+V++R   +V SFDFAP     +  ++    ++LV+L NN +EV+        A  +     E     ++L  +DLQGHRSDVR +A+SSD  ++AS S  L K W+ +TR C+RS+ CG+ L  AF PGDRH+L+GTK G L++ D
Sbjct:  356 DEIKSQVIVRTQAKVGSFDFAPV----KDVAKAGHVQILVSLTNNVIEVYN-------APYDVDKKDEDTEDYTKLHYIDLQGHRSDVRTLALSSDDGILASASQNLLKLWNIKTRMCIRSIDCGYALCSAFLPGDRHILLGTKTGELELYD 496          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A1Y2GN87_9FUNG (WD40 repeat-like protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GN87_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 2.890e-26
Identity = 68/167 (40.72%), Postives = 104/167 (62.28%), Query Frame = 0
Query:    6 GSTAGESGVDRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASCSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            G+TA E   D + A DE+    VLR+  + RSFDFAP+    +   +    +++ +L+NN++EVW V   TA  + E  +  E     S+   L+L GHRSD+RAVA+SSD  ++ S S+G  K W+ +T  C+R++ CG+ L  AF PG+RH++VGTK G+L++ D
Sbjct:  335 GATAEEPVDDTIQATDEITPWHVLRSAAKFRSFDFAPA----KDVQKLGHIQLVASLNNNTVEVWSVPHPTATKNEE--VANEP----SKAYTLELAGHRSDIRAVALSSDDELLCSASNGSLKIWNVKTTSCIRTMDCGYALCCAFLPGNRHVIVGTKTGHLELFD 491          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: S2J3A1_MUCC1 (Utp12 domain-containing protein n=6 Tax=Mucoraceae TaxID=34489 RepID=S2J3A1_MUCC1)

HSP 1 Score: 112 bits (280), Expect = 1.350e-25
Identity = 64/160 (40.00%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAK--ASCSRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            + + A DE  SE ++R   +VRSFDFAP A       +    +++ +L NN++E + V            I  E K  A  SRL  +D+ GHRSD+R +A+SSD  ++AS S  L K W+ +TR C+RS+ CGF L  AF PG++H+++GTK G L++ D
Sbjct:  330 NEIEAEDEFTSECLVRTPAKVRSFDFAPVA----DVEKAGEIQIVASLSNNTIEAYTVP-----------ITHEKKEEAEASRLYSIDVPGHRSDIRTLALSSDDELLASASSNLLKVWNMKTRSCIRSIECGFALCSAFLPGNKHIIIGTKTGELELYD 474          
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Match: A0A077WSG5_9FUNG (Utp12 domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WSG5_9FUNG)

HSP 1 Score: 112 bits (279), Expect = 1.840e-25
Identity = 67/162 (41.36%), Postives = 97/162 (59.88%), Query Frame = 0
Query:   15 DRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSRSRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASC----SRLAILDLQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTVAFAPGDRHLLVGTKEGNLQVDD 172
            D ++A D   S +++RA  +VRSFDF P         +    +VL++L +N +EV+              +  + KA      SR A LD+ GHRSD+RAVA+SSD  ++AS S+GL K W+ +TR C+RS+ CG+ L  AF PG+RH+LVGTK G L++ D
Sbjct:  324 DDILAEDLYHSYMIVRAPTKVRSFDFPPK----NDYEKKGHLQVLLSLSDNVIEVYNAP-----------LPADKKADPTLEPSRQASLDMHGHRSDIRAVALSSDDEVLASASNGLLKIWNVKTRSCIRSIECGYALCCAFLPGNRHVLVGTKAGMLELYD 470          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124189.1818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS39_ECTSI1.320e-5661.66Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835Z9P3_9STRA2.510e-3450.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
E1ZIF0_CHLVA7.070e-2842.35Utp12 domain-containing protein n=1 Tax=Chlorella ... [more]
A0A6U0TFN6_9STRA4.470e-2745.12Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A3M7L422_AUXPR1.130e-2644.30Utp12 domain-containing protein n=4 Tax=Auxenochlo... [more]
A0A2P6U020_CHLSO1.140e-2642.26WD repeat-containing 3 n=1 Tax=Chlorella sorokinia... [more]
A0A168KM37_ABSGL2.880e-2642.11Utp12 domain-containing protein n=2 Tax=Absidia Ta... [more]
A0A1Y2GN87_9FUNG2.890e-2640.72WD40 repeat-like protein n=1 Tax=Lobosporangium tr... [more]
S2J3A1_MUCC11.350e-2540.00Utp12 domain-containing protein n=6 Tax=Mucoraceae... [more]
A0A077WSG5_9FUNG1.840e-2541.36Utp12 domain-containing protein n=2 Tax=Lichtheimi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 15..172
e-value: 1.6E-11
score: 45.7
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 18..170
NoneNo IPR availablePANTHERPTHR19853:SF0WD REPEAT-CONTAINING PROTEIN 3coord: 18..170
NoneNo IPR availableSUPERFAMILY117289Nucleoporin domaincoord: 58..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig124189contigH-elongata_contig124189:1330..1884 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig124189.1818.1mRNA_H-elongata_contig124189.1818.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig124189 1330..1884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig124189.1818.1 ID=prot_H-elongata_contig124189.1818.1|Name=mRNA_H-elongata_contig124189.1818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
MAARGGSTAGESGVDRLIAGDELESEVVLRADHRVRSFDFAPSARSGRSR
SRGASTRVLVALHNNSMEVWGVESATAAASAEQGIGGEAKASCSRLAILD
LQGHRSDVRAVAISSDASMVASVSHGLAKTWSSRTRQCVRSVPCGFGLTV
AFAPGDRHLLVGTKEGNLQVDD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf