mRNA_H-elongata_contig124100.1812.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 104 bits (260), Expect = 6.490e-26 Identity = 48/55 (87.27%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 MYELDKEDTKAYLDLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAGN 165
MYE DKE K YLD LDWWRVRC DFPHLAN+ARRVLAIPATQAESERLFSCAGN
Sbjct: 209 MYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGN 263
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 2.400e-11 Identity = 30/32 (93.75%), Postives = 32/32 (100.00%), Query Frame = 1
Query: 70 TDFPHLANVARRVLAIPATQAESERLFSCAGN 165
TDFPHLAN+ARRVLAIPATQA+SERLFSCAGN
Sbjct: 152 TDFPHLANLARRVLAIPATQAKSERLFSCAGN 183
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 60.5 bits (145), Expect = 2.700e-9 Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 28 KAYLDLLDWWRVRCTDFPHLANVARRVLAIPATQAESERL 147
K Y D LDWWR R +FPHLA +ARRVLAIP++QA SER+
Sbjct: 510 KVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A015I940_RHIIW (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015I940_RHIIW) HSP 1 Score: 60.5 bits (145), Expect = 2.710e-9 Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 46 LDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAGN 165
LDWWR+R +FP LA +AR+ LAIPAT SERLFS AGN
Sbjct: 662 LDWWRIRSQNFPKLAKLARKYLAIPATSVSSERLFSDAGN 701
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: U9UP26_RHIID (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9UP26_RHIID) HSP 1 Score: 55.5 bits (132), Expect = 1.020e-8 Identity = 25/40 (62.50%), Postives = 30/40 (75.00%), Query Frame = 1
Query: 46 LDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAGN 165
LDWW++ +FP LA +AR+ LAIPAT SERLFS AGN
Sbjct: 16 LDWWQICFQNFPKLAKLARKYLAIPATSVSSERLFSNAGN 55
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 58.5 bits (140), Expect = 1.300e-8 Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 46 LDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAG 162
L+WWRV+ ++P LA++ARRVL IPA QA+SER+FS AG
Sbjct: 481 LEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAG 519
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: UPI0011C102C8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C102C8) HSP 1 Score: 56.6 bits (135), Expect = 5.230e-8 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 1
Query: 10 LDKEDTKAYLDLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAGN 165
L + A + L+WWR+ T+FP LAN+A++ + IPAT A SER FS GN
Sbjct: 210 LQSVEVDAEANPLEWWRLHQTNFPRLANLAKKYICIPATSAPSERAFSTGGN 261
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: UPI000EAB1B8F (zinc finger BED domain-containing protein 1-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI000EAB1B8F) HSP 1 Score: 55.1 bits (131), Expect = 7.050e-8 Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 40 DLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAGN 165
+++ WW+ FP LA VAR +LAIPATQ SERLFS AGN
Sbjct: 102 NVISWWKANIVRFPLLAAVARNLLAIPATQVTSERLFSTAGN 143
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 53.9 bits (128), Expect = 1.130e-7 Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 1
Query: 40 DLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAG 162
D+ +WWR FPHL+++AR++L IPAT SER+FS AG
Sbjct: 67 DVFEWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAG 107
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Match: A0A3B3T1Z0_9TELE (Uncharacterized protein n=1 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3T1Z0_9TELE) HSP 1 Score: 55.8 bits (133), Expect = 1.150e-7 Identity = 24/41 (58.54%), Postives = 29/41 (70.73%), Query Frame = 1
Query: 40 DLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFSCAG 162
DLL WW+ + P L+ +ARR+LAIPAT A SER FS AG
Sbjct: 371 DLLSWWKEHASTLPRLSQIARRILAIPATSAPSERAFSAAG 411 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig124100.1812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig124100.1812.1 >prot_H-elongata_contig124100.1812.1 ID=prot_H-elongata_contig124100.1812.1|Name=mRNA_H-elongata_contig124100.1812.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=55bp MYELDKEDTKAYLDLLDWWRVRCTDFPHLANVARRVLAIPATQAESERLFback to top mRNA from alignment at H-elongata_contig124100:1315..1479- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig124100.1812.1 ID=mRNA_H-elongata_contig124100.1812.1|Name=mRNA_H-elongata_contig124100.1812.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=165bp|location=Sequence derived from alignment at H-elongata_contig124100:1315..1479- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig124100:1315..1479- >mRNA_H-elongata_contig124100.1812.1 ID=mRNA_H-elongata_contig124100.1812.1|Name=mRNA_H-elongata_contig124100.1812.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at H-elongata_contig124100:1315..1479- (Himanthalia elongata Himel1 dioecious)back to top |