prot_H-elongata_contig12395.1801.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig12395.1801.1
Unique Nameprot_H-elongata_contig12395.1801.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length830
Homology
BLAST of mRNA_H-elongata_contig12395.1801.1 vs. uniprot
Match: A0A6H5K5G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G3_9PHAE)

HSP 1 Score: 635 bits (1639), Expect = 7.420e-211
Identity = 426/840 (50.71%), Postives = 480/840 (57.14%), Query Frame = 0
Query:    1 MERMAEAWQAIEAKNARHDTSQKLNREKPMFCMDSLGKRIKAALLCKALPKGDNPAEYVNGPENAPSRNLVTAIKLAGYVIHSGTGGKVSAVDGDGRKPPSNYTKEEFHNNVLPRVAENQPPRIMNELRQLSCRLVASGIAKGLLTEDDLPQIRKTLVSRFHDGGMHFLGGGDAPFARFIGVAANAHRLLERGDIDEFVLFHERVVKLVGMCRNRVRRAAYATSKNMLAQADNTGRYVVVKSGSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXXGMMAGPVPTQPFEGQAWRNGETPVAPTAA-----RIPIPIPIPGIPSQAPYEA-------PAAVYGEPALDRN--KXXXXXXXXXXXXXXXSIARAAMSILPVDNIPTQTANHRNQI------------------------------GLAQASDATSFVAASFHNTQHTEHG-GALSVASPEMFTRHSPLGYRRGPANGPGGAWG--------NGASRGQT----------------------------GHVPRTDAAPVLVLQPGWGVTLPPHVLGMMDPKRPRNLPMKMLWELRVEALSGSPDVVVVEMRQVPGYLDFLAEIMPPEMLKFRLAARCWDTILGKNKSRPLLEEAAAELHHLGLVPMPPDSSLRQVYDEFASHTR------NSSDV-------------------------------------------------------------IAPYSADIVVRVNHSPNTAEIARSHPT-GRSDGP-LHEG-VRVPPVAAGVLRDLRREGVLNGEVAVAERGSNGWGEGGVGG 689
            MERMAEAWQAIEAKNARHDTS KL+REKPMFCMDSLGKRIKAALLCK LP  DNPAEYVNG  NAPSRNLVTAIKLAGYV+H GTGGKVSAVDGDGR+PPS YTKEEFHNNVLPR AENQPPRI+NELRQLSCRLVASGIAKGLL ++DLP+IRK LVSRF DGGMHFL GGDA FARFIGVAANAH+LLERGDID+FV FHERVVKLVGMCRNRVRRAAYATSK+MLAQA+  GR + VKS S+               XXXXXXXXXXXXXXX XX                        G+M             WRNG+ PVA  AA     R P P   PG+P    ++A       P A +G+P    N                  +I RAAMS+LP   +PT + +  +++                              G+A                    H   ALS A+PE+ T+   +GYRR PA GP G WG         G +RG +                            G   R D+ PVLVLQPGWGVTLPP+ LGMMDPKRPR++P+KMLWELR E L G+ D V+VEMRQVPGYLDFLAEIMP +MLKFR + RCW+T+ GKN+SR LLEEAAA L HLGLVPMP  SSLR VYD+F +         NS  +                                                              A  +AD       +P   E ARSH   G ++G  L  G V VPPVAAGVLRDL REG LNGEV      SN WG  G GG
Sbjct:  151 MERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAEYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILVSRFEDGGMHFLAGGDAAFARFIGVAANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSMLAQANGNGRLLSVKSSSASRRKSAPLPQLPPLPXXXXXXXXXXXXXXXXXXTSTP--------------------GLMP------------WRNGDPPVAMPAAPGVHGRAPPP---PGLPGHGQHDALTATGASPGAPFGKPPPLENGSSVGFVGPPSAGFNNGGAIIRAAMSMLPPGGMPTPSHDPNDRLQXXXXXXXXXXXXXXXXXXXXXMPFVSQAPGVANXXXXXXXXXXXXXXXXXXFHDHNALSAAAPEILTQ---MGYRRAPAFGPEGIWGANDAGASVGGGARGHSVAPXXXXXXXPAAMPVAPAGVAPXXAPGGAAARVDSPPVLVLQPGWGVTLPPYFLGMMDPKRPRSVPVKMLWELRAEPLPGAADSVLVEMRQVPGYLDFLAEIMPADMLKFRWSLRCWETLQGKNESRALLEEAAAALSHLGLVPMPLGSSLRLVYDDFVARRAVAAIGVNSGSINSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPNNTAANNTADANSTNASTPVNPETARSHAAAGHAEGEALRAGSVGVPPVAAGVLRDLHREGTLNGEV------SNAWGASGDGG 946          
BLAST of mRNA_H-elongata_contig12395.1801.1 vs. uniprot
Match: D7FRL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL6_ECTSI)

HSP 1 Score: 406 bits (1044), Expect = 2.110e-131
Identity = 200/228 (87.72%), Postives = 211/228 (92.54%), Query Frame = 0
Query:    1 MERMAEAWQAIEAKNARHDTSQKLNREKPMFCMDSLGKRIKAALLCKALPKGDNPAEYVNGPENAPSRNLVTAIKLAGYVIHSGTGGKVSAVDGDGRKPPSNYTKEEFHNNVLPRVAENQPPRIMNELRQLSCRLVASGIAKGLLTEDDLPQIRKTLVSRFHDGGMHFLGGGDAPFARFIGVAANAHRLLERGDIDEFVLFHERVVKLVGMCRNRVRRAAYATSKNML 228
            MERMAEAWQAIEAKNARHDTS KL+REKPMFCMDSLGKRIKAALLCK LP  DNPA YVNG  NAPSRNLVTAIKLAGYV+H GTGGKVSAVDGDGR+PPS YTKEEFHNNVLPR AENQPPRI+NELRQLSCRLVASGIAKGLL ++DLP+IRK L+SRF DGGMHFL GGDA FARFIGV ANAH+LLERGDID+FV FHERVVKLVGMCRNRVRRAAYATSK+ML
Sbjct:  154 MERMAEAWQAIEAKNARHDTSHKLHREKPMFCMDSLGKRIKAALLCKTLPPNDNPAVYVNGSSNAPSRNLVTAIKLAGYVVHCGTGGKVSAVDGDGREPPSKYTKEEFHNNVLPRAAENQPPRILNELRQLSCRLVASGIAKGLLKQEDLPEIRKILISRFEDGGMHFLAGGDAAFARFIGVTANAHKLLERGDIDDFVAFHERVVKLVGMCRNRVRRAAYATSKSML 381          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12395.1801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K5G3_9PHAE7.420e-21150.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRL6_ECTSI2.110e-13187.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12395contigH-elongata_contig12395:2460..7947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12395.1801.1mRNA_H-elongata_contig12395.1801.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig12395 1209..7959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig12395.1801.1 ID=prot_H-elongata_contig12395.1801.1|Name=mRNA_H-elongata_contig12395.1801.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=830bp
MERMAEAWQAIEAKNARHDTSQKLNREKPMFCMDSLGKRIKAALLCKALP
KGDNPAEYVNGPENAPSRNLVTAIKLAGYVIHSGTGGKVSAVDGDGRKPP
SNYTKEEFHNNVLPRVAENQPPRIMNELRQLSCRLVASGIAKGLLTEDDL
PQIRKTLVSRFHDGGMHFLGGGDAPFARFIGVAANAHRLLERGDIDEFVL
FHERVVKLVGMCRNRVRRAAYATSKNMLAQADNTGRYVVVKSGSSRRIPQ
QQHHHQQQQQHHQHQQQQHQQPPQQHQKHQQHQQHQQQAAAVAAAAAAAA
AAGMMAGPVPTQPFEGQAWRNGETPVAPTAARIPIPIPIPGIPSQAPYEA
PAAVYGEPALDRNKNSNGNGNHSGNGNGNSIARAAMSILPVDNIPTQTAN
HRNQIGLAQASDATSFVAASFHNTQHTEHGGALSVASPEMFTRHSPLGYR
RGPANGPGGAWGNGASRGQTGHVPRTDAAPVLVLQPGWGVTLPPHVLGMM
DPKRPRNLPMKMLWELRVEALSGSPDVVVVEMRQVPGYLDFLAEIMPPEM
LKFRLAARCWDTILGKNKSRPLLEEAAAELHHLGLVPMPPDSSLRQVYDE
FASHTRNSSDVIAPYSADIVVRVNHSPNTAEIARSHPTGRSDGPLHEGVR
VPPVAAGVLRDLRREGVLNGEVAVAERGSNGWGEGGVGGSELQRTLAAPA
PAPVPAPGAGIGAGSLDTPSSNALGGASGSGAPTCSSMTGQWISPPVSLT
GQGTTAAAPVSAPSPASVATAAASGAAAVRTTDNESGIGSGNGSSSVGVS
ISIVSGVCGKRKAGSVFTDPALTEDDVDW*
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