prot_H-elongata_contig123811.1792.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123811.1792.1
Unique Nameprot_H-elongata_contig123811.1792.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length40
Homology
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A7S2C9X7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C9X7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.340e-15
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            +VCIGGGAGFIGSHLAKR+ ++GWYV+C DWK+NEFMQ
Sbjct:   21 RVCIGGGAGFIGSHLAKRMMSEGWYVICVDWKDNEFMQ 58          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A7S2CJC0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJC0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.440e-15
Identity = 31/37 (83.78%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFM 37
            KVCIGGGAGFIGSHLAKR+ A+GW+V+CADWK+NEFM
Sbjct:   33 KVCIGGGAGFIGSHLAKRMMAEGWHVICADWKDNEFM 69          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A812WUJ0_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WUJ0_SYMMI)

HSP 1 Score: 73.2 bits (178), Expect = 2.750e-15
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            KVC+GGGAGFIGSH+AKRLK  G YVVCADWK+NEFM+
Sbjct:   24 KVCVGGGAGFIGSHIAKRLKEAGCYVVCADWKDNEFME 61          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: D8LR35_ECTSI (Nad-dependent epimerase/dehydratase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR35_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.280e-15
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            KV IGGGAGFIGSHLAKRLK +GWYVVCADWK NEFM+
Sbjct:   37 KVFIGGGAGFIGSHLAKRLKGEGWYVVCADWKANEFME 74          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A1E7FKD6_9STRA (Putative bifunctional dTDP-glucose 4,6-dehydratase/UDP-glucuronate decarboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKD6_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.470e-15
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQS 39
            KVC+GGGAGFIGSH+AKRLK  GWYV+C DWK NEFM++
Sbjct:   17 KVCVGGGAGFIGSHIAKRLKEAGWYVICVDWKTNEFMKN 55          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A7S3L783_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L783_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.070e-14
Identity = 30/38 (78.95%), Postives = 36/38 (94.74%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            KVC+GGGAGFIGSH+AKRLK +G+YV+C DWKENEFM+
Sbjct:   16 KVCVGGGAGFIGSHIAKRLKENGYYVICVDWKENEFMK 53          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A1Z5JTK3_FISSO (GDP-D-mannose 3', 5'-epimerase n=2 Tax=Naviculales TaxID=38748 RepID=A0A1Z5JTK3_FISSO)

HSP 1 Score: 72.4 bits (176), Expect = 7.160e-14
Identity = 31/38 (81.58%), Postives = 35/38 (92.11%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            KVC+GGGAGFIGSH+AKRLKA G+YVV  DWKENEFM+
Sbjct:   13 KVCVGGGAGFIGSHIAKRLKAAGYYVVVVDWKENEFME 50          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: K0TK28_THAOC (Epimerase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TK28_THAOC)

HSP 1 Score: 66.6 bits (161), Expect = 1.120e-13
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQSQ 40
            KVC+GGGAGFIGSH+AKRLK +G+ V   DWKENEFM+ +
Sbjct:   16 KVCVGGGAGFIGSHIAKRLKENGYRVTVVDWKENEFMKPE 55          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A7R9WN58_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WN58_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.380e-13
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQSQ 40
            K C+GGGAGFIGSH+AKRLK  GWYV+  DWK+NEFM+ +
Sbjct:   17 KACVGGGAGFIGSHIAKRLKESGWYVIVVDWKKNEFMKEE 56          
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Match: A0A1Z5KPK9_FISSO (GDP-D-mannose 3', 5'-epimerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPK9_FISSO)

HSP 1 Score: 70.9 bits (172), Expect = 2.570e-13
Identity = 30/38 (78.95%), Postives = 34/38 (89.47%), Query Frame = 0
Query:    1 KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQ 38
            KVC+GGGAGFIGSH+AKRLK  G+YVV  DWKENEFM+
Sbjct:   13 KVCVGGGAGFIGSHIAKRLKTAGYYVVVVDWKENEFME 50          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123811.1792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2C9X7_9STRA2.340e-1578.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2CJC0_9STRA2.440e-1583.78Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A812WUJ0_SYMMI2.750e-1581.58Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
D8LR35_ECTSI4.280e-1586.84Nad-dependent epimerase/dehydratase n=1 Tax=Ectoca... [more]
A0A1E7FKD6_9STRA7.470e-1576.92Putative bifunctional dTDP-glucose 4,6-dehydratase... [more]
A0A7S3L783_9STRA1.070e-1478.95Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JTK3_FISSO7.160e-1481.58GDP-D-mannose 3', 5'-epimerase n=2 Tax=Naviculales... [more]
K0TK28_THAOC1.120e-1370.00Epimerase domain-containing protein (Fragment) n=1... [more]
A0A7R9WN58_9STRA1.380e-1370.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1Z5KPK9_FISSO2.570e-1378.95GDP-D-mannose 3', 5'-epimerase n=1 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 2..34
e-value: 1.0E-5
score: 25.2
NoneNo IPR availableGENE3D3.40.50.720coord: 4..38
e-value: 9.5E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR43574FAMILY NOT NAMEDcoord: 1..39
NoneNo IPR availablePANTHERPTHR43574:SF13GDP-MANNOSE 3,5-EPIMERASEcoord: 1..39
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123811contigH-elongata_contig123811:577..696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123811.1792.1mRNA_H-elongata_contig123811.1792.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123811 577..696 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123811.1792.1 ID=prot_H-elongata_contig123811.1792.1|Name=mRNA_H-elongata_contig123811.1792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp
KVCIGGGAGFIGSHLAKRLKADGWYVVCADWKENEFMQSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf