mRNA_H-elongata_contig123739.1791.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D8LJQ4_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 4.870e-58 Identity = 83/131 (63.36%), Postives = 109/131 (83.21%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVNGE 393
+V CF +NPG+LMYGMMC+VY+TG WLLLASYL LPVSTTH+T+G++IGM + YGG CVVW + +D FPY++GV+AI SWV+SP+ + I+S +F TVR+ VLRSPNAF RSF+V+PILV+ +TV+GE
Sbjct: 28 KVECFLDNPGVLMYGMMCVVYTTGMWLLLASYLALPVSTTHATIGAMIGMTVVYGGAGCVVWFQESDSFPYVKGVAAIAVSWVLSPIFSGIVSLLVFLTVRAFVLRSPNAFGRSFWVFPILVMVAITVDGE 158
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D8LJQ6_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ6_ECTSI) HSP 1 Score: 189 bits (481), Expect = 7.880e-56 Identity = 85/129 (65.89%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVN 387
V CF +NPG+LMYGMMC+VY+TG WLLLASYLELPVSTTHST+G+IIGMA+AY G+ CVVW + +DIFPY +GV+AI SWV+SP+ + + S +F TVR+ VLRSPNAF RSF+V+P+LV+ T+ VN
Sbjct: 49 NVECFLDNPGILMYGMMCVVYTTGMWLLLASYLELPVSTTHSTIGAIIGMAVAYAGSGCVVWYQESDIFPYFKGVAAIAVSWVLSPIFSGVASLLVFLTVRAFVLRSPNAFGRSFWVFPVLVMVTIAVN 177
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: A0A6H5JNL8_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNL8_9PHAE) HSP 1 Score: 183 bits (464), Expect = 1.610e-53 Identity = 80/131 (61.07%), Postives = 105/131 (80.15%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVNGE 393
++ CF +NPG+LMYG MC+VY+TG WLLLASY ELPVSTTHST+G I+GMAM Y G CVVW E D+FPYL+G+SAIVASWV+SP+ +A+++ +LF +R+ VLRSP++ QR+ V+P LV T+ VNG
Sbjct: 4 KIECFTDNPGILMYGNMCVVYTTGIWLLLASYFELPVSTTHSTIGGIVGMAMTYRGADCVVWYEEADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHQRAIVVFPFLVTATIAVNGN 134
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D8LJP9_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP9_ECTSI) HSP 1 Score: 172 bits (435), Expect = 7.050e-53 Identity = 76/131 (58.02%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVNGE 393
QVSCF +NPG+LMYGMMC++Y+T WLLLASYLELPVS T ST+ SI+GM +AYGG +CVVW ++ FP +GV AI+ W++SP+ A + SC +F +R+ VLRSP+AF+RSF+V+P+LV+ V ++GE
Sbjct: 6 QVSCFLDNPGVLMYGMMCVLYTTAMWLLLASYLELPVSATQSTISSIVGMTLAYGGRACVVWHRESEHFPGFQGVGAILLYWLLSPIVAGVASCLVFLALRTFVLRSPHAFRRSFWVFPVLVMIIVALDGE 136
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 177 bits (449), Expect = 8.490e-51 Identity = 80/129 (62.02%), Postives = 102/129 (79.07%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVN 387
+ CF +NPG+LMYG MC+VY+TG WLLLAS+ ELPVSTTHSTVG I+GMAM Y G CVVW E D+FPYL+GVSAIVASW +SPL +A+++ +LF +R+ VLRSP+A +R+ V+P LV T+ VN
Sbjct: 88 DIECFEDNPGILMYGNMCVVYTTGIWLLLASFFELPVSTTHSTVGGIVGMAMTYRGADCVVWYEEADLFPYLKGVSAIVASWALSPLFSAVIAVALFLFMRTFVLRSPDAHKRAINVFPFLVTATIAVN 216
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 174 bits (440), Expect = 1.810e-49 Identity = 76/129 (58.91%), Postives = 103/129 (79.84%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVN 387
CF +NPG+LMYG MC+VY+TG WLLLAS+ ELPVSTTHST+G I+GMA+ Y G CVVW E+ D+FPYL+G+SAIVASWV+SP+ +A+++ +LF +R+ VLRSP++ +R+ V+P LV T+ VN
Sbjct: 89 DTECFEDNPGILMYGNMCVVYTTGFWLLLASFFELPVSTTHSTIGGIVGMAITYRGPDCVVWYEKADLFPYLKGISAIVASWVLSPVLSAVIAVALFLFMRTFVLRSPDSHKRAIVVFPFLVTATIAVN 217
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 164 bits (416), Expect = 7.130e-46 Identity = 72/129 (55.81%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVN 387
QV CF +NPG+LMYG MC+VY++G WLLLAS+ ELPVSTTH+TVG I+GMAM Y G CVVW E + FPYL+GVSAIVASW +SP+ +A+++ +L++ +R+ VLR+ + +++ ++P LV T+ VN
Sbjct: 96 QVGCFVDNPGILMYGNMCVVYTSGFWLLLASFFELPVSTTHATVGGIVGMAMTYRGADCVVWYEEAEFFPYLKGVSAIVASWALSPVLSAVIAVALYFFMRTFVLRADQSQKKAINIFPCLVTVTIAVN 224
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 161 bits (408), Expect = 8.790e-45 Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTV 384
+ CF +NPG+LMYG MC+VY+ G WLLLAS+ ELPVSTTHST+G I+GM M Y G CVVW E D FPY++GV AIV SW + P+ + +++ LF+ VR+LVLRS +A RS V+P+LV T+ +
Sbjct: 89 DIECFTDNPGILMYGNMCVVYTNGIWLLLASFFELPVSTTHSTIGGIVGMTMTYRGADCVVWYEEADHFPYIKGVFAIVVSWALFPVLSGVVATLLFFVVRALVLRSEHALNRSMIVFPLLVTVTIAI 216
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: A0A7S0QA31_9EUKA (Phosphate transporter n=3 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QA31_9EUKA) HSP 1 Score: 158 bits (399), Expect = 1.820e-43 Identity = 72/129 (55.81%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTVN 387
+ CF + P +LMYG +C+++S G WLLLASYLE+PVSTTHS VG +IGMAM G +CV+W E TD FPY++GVSAIV SW +SPL +AI + LF VR+ VLR+ +++ R+F VYP+LV T+ +N
Sbjct: 78 DIDCFVDEPAVLMYGCLCVIFSVGGWLLLASYLEMPVSTTHSCVGGMIGMAMVAHGPACVIWAEPTDQFPYVKGVSAIVISWFLSPLLSAISAMGLFLLVRTTVLRAKDSYDRAFKVYPLLVGVTIFIN 206
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Match: A0A7S2V1L4_9STRA (Phosphate transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L4_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.740e-42 Identity = 71/128 (55.47%), Postives = 97/128 (75.78%), Query Frame = 1
Query: 1 QVSCFANNPGMLMYGMMCIVYSTGAWLLLASYLELPVSTTHSTVGSIIGMAMAYGGTSCVVWQERTDIFPYLRGVSAIVASWVVSPLCAAILSCSLFYTVRSLVLRSPNAFQRSFYVYPILVLGTVTV 384
V CF ++ MLMYGMMC+++ TG WLLLA+ LELPVSTTHST+G IIGM MA G+SCV+W+ TD FPY++GV+A+V SW++SPL +AI++ F T R+ VLR P+A++R+ YPI V T+ +
Sbjct: 79 DVECFVDDGEMLMYGMMCVIFVTGVWLLLATVLELPVSTTHSTIGGIIGMTMAAKGSSCVIWKTDTDQFPYVKGVAAVVISWILSPLFSAIVAAIFFLTTRATVLRHPDAYKRALLSYPIFVGCTLVI 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123739.1791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig123739.1791.1 >prot_H-elongata_contig123739.1791.1 ID=prot_H-elongata_contig123739.1791.1|Name=mRNA_H-elongata_contig123739.1791.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=128bp MLREQSGNAHVWHDVHRVLDGGMASPSLVPRAAGIHDTLYRGQHHRDGHGback to top mRNA from alignment at H-elongata_contig123739:998..1390- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig123739.1791.1 ID=mRNA_H-elongata_contig123739.1791.1|Name=mRNA_H-elongata_contig123739.1791.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=393bp|location=Sequence derived from alignment at H-elongata_contig123739:998..1390- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig123739:998..1390- >mRNA_H-elongata_contig123739.1791.1 ID=mRNA_H-elongata_contig123739.1791.1|Name=mRNA_H-elongata_contig123739.1791.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=768bp|location=Sequence derived from alignment at H-elongata_contig123739:998..1390- (Himanthalia elongata Himel1 dioecious)back to top |