mRNA_H-elongata_contig12370.1788.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig12370.1788.1
Unique NamemRNA_H-elongata_contig12370.1788.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: A0A6H5JTN9_9PHAE (MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN9_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 2.200e-67
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 2 
Query:   83 QGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTF----VNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            QGNEVYGG + SAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS+NTFENNKYG+RFSVG A + F++N I N++KYN Y+Y GSD+PDVV SGR Q+NVFS N   G++E IK+K++D  QF DN F     +    RFD++T   M GN+GLD  E ELKVTN +CFD+ SDS Y P+C
Sbjct:    6 QGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRFSVGCADNVFSENTISNNSKYNAYSYLGSDEPDVVSSGRSQNNVFSQNSFAGAAETIKIKEADGTQFLDNVFEVGDADGLVVRFDDATGNLMKGNTGLDDGEFELKVTNDSCFDEESDSGYEPLC 192
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 8.540e-63
Identity = 119/190 (62.63%), Postives = 142/190 (74.74%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTF----VNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            VS QGNEVYGG + SAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYG+R SVG A + F++N+I N++KYN YTY GSD+PDVV SGR Q+NVFS N   G+ E IK+K++D  QF DN F     +    RFD++    M GN+GLD  + ELKVTN +CFD  SDS Y P+C
Sbjct:  323 VSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 2.720e-62
Identity = 119/190 (62.63%), Postives = 141/190 (74.21%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTF----VNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            VS QGNEVYGG + SAGIFLHRSSD+A VKGNYVHDNGDAG+A LESFNA VS NTFENNKYG+RFSVG A + F++N I N+ +YN Y+Y G+D+PDVV SGR Q+NVFS N   G+ E IK+K++D  QF DN F     +    RFDN+T   M GN+GLD  E ELKV N ACFD  +DS Y P+C
Sbjct:  319 VSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 2.120e-55
Identity = 106/176 (60.23%), Postives = 128/176 (72.73%), Query Frame = 2 
Query:  104 GGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            G   S GIFLHRSSD+A VK NY  DNGDAGMA +ESFNA VSNN FE+NKYG+R SVG A + F+ NVI +S++YN+YTYEGSDDP VVDSGR Q N+FSDN I G  E+IKL  +D  +F DNTF +  T RF+++    M GN+GL      LKV+ GACFD  SDS+Y P+C
Sbjct:  152 GSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKSAKTVRFEDAQDTIMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 325
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: Q7XAK0_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK0_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 6.220e-55
Identity = 106/185 (57.30%), Postives = 131/185 (70.81%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPI 628
            VS QGNEVYGG   SAGIFL+RSSD+A VKGNYVHDNGDAG+A +ESFNA VS+N FENNKYG+R SVG   + F+ NVI  STKYN Y+Y G+D PDVV SGR + N F +N IVG  E +K+  +D  +F  N+F +  T RFD++    M GN+GL   + +LKV NGA FD  +D  + PI
Sbjct:   83 VSIQGNEVYGGASSSAGIFLYRSSDDAVVKGNYVHDNGDAGLAMMESFNADVSDNIFENNKYGVRISVGCGRNIFSKNVISGSTKYNAYSYLGTDAPDVVKSGRSKDNCFQENTIVGGIETLKIMDADGTEFIGNSFEDAVTIRFDDAARTVMSGNTGLT--DTKLKVHNGASFDKRADYGFEPI 265
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.130e-54
Identity = 111/185 (60.00%), Postives = 134/185 (72.43%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPI 628
            VS QGNEVYGG   SAGIFLHRSSDN  VKGNYVHDNGDAG+A LESFNA VS+NTFENNKYG+R SVG   + F+ NVI  S ++N ++Y G+D P+VVDSGR Q NVF +N I+G  E+I LK++D  QF DNTF +    RF ++T   M GN+GL   +  LKV  GA FD+SSD  + PI
Sbjct:  290 VSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGNTGLA--DSTLKVDRGATFDESSDHGFEPI 472
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 5.470e-52
Identity = 105/176 (59.66%), Postives = 125/176 (71.02%), Query Frame = 2 
Query:  104 GGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            G   S GIFLHRSSD+A VK N    NGDAGMA +ESFNA VSNN FE+NKYG+R SVG A + F+ NVI +S+KYN+YTYEGSDDP VVDSGR Q N+FSDN I G  E+IKL  +D  +F DNTF    T RF+++    M GN+GL      LKV+ GACFD  SDS+Y P+C
Sbjct:  329 GSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGNTGLG--SATLKVSKGACFDKKSDSDYKPVC 502
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.830e-46
Identity = 104/185 (56.22%), Postives = 124/185 (67.03%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPI 628
            VS QGNEVYGG   SAGIFLHR                DAG+A +ESFNA VS+N FENNKYGIRFSVGS  + F +NVI  ST+Y+ Y+Y GSD PDVVDSGR Q NVF +N I+G  E+IKL  +D  QF DNTF + TT RF+++    M GN GL++ +  LKV NGA FD SSD  + PI
Sbjct:  316 VSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGNIGLNMSK--LKVVNGASFDASSDYGFEPI 498
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 184 bits (468), Expect = 2.480e-46
Identity = 99/172 (57.56%), Postives = 117/172 (68.02%), Query Frame = 2 
Query:  116 SAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTTTTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPIC 631
            S GIFLHRSSD+A VK NYVHDNGDAGMA +E+FNA VSNN FE+NKYGIR SVG A + F+ N I  S+KYN+YTY+GSD P VVDSGR Q          G  E +KL  +D  +F DNTF +  T RF++     M GNSGL      LKVT+G+CFD  SDS Y P+C
Sbjct:  330 SVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLG--GASLKVTDGSCFDKKSDSAYKPVC 499
[Close]
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Match: D8LHA3_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA3_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 7.070e-37
Identity = 74/107 (69.16%), Postives = 88/107 (82.24%), Query Frame = 2 
Query:   74 VSSQGNEVYGGGDISAGIFLHRSSDNATVKGNYVHDNGDAGMAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTYEGSDDPDVVDSGRPQS 394
            VS +GNEVYGG + SAGIFLHRSSD+A  KGNYVH+NGDAG+A LESFNA VS NTFENNKYG+RFSVG A + F+DN I N+ +YN Y+Y GSD+ DVV SGR ++
Sbjct:  115 VSIRGNEVYGGAETSAGIFLHRSSDDAIAKGNYVHENGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSDNTISNNAEYNAYSYLGSDETDVVSSGRSRT 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12370.1788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JTN9_9PHAE2.200e-6763.64MEP5b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FXE4_ECTSI8.540e-6362.63Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.720e-6262.63Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ9_9PHAE2.120e-5560.23Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAK0_9PHAE6.220e-5557.30Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAJ8_9PHAE1.130e-5460.00Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
Q7XAK2_9PHAE5.470e-5259.66Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]
Q7XAJ7_9PHAE1.830e-4656.22Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
A8CEP1_SACJA2.480e-4657.56Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D8LHA3_ECTSI7.070e-3769.16Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig12370contigH-elongata_contig12370:385..4551 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score96.3
Seed ortholog evalue1.3e-17
Seed eggNOG ortholog2880.D7G8D9
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons3
Model size3145
Cds size444
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig12370.1788.1prot_H-elongata_contig12370.1788.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig12370 1128..2046 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929728.7255795-UTR-H-elongata_contig12370:384..5481622929728.7255795-UTR-H-elongata_contig12370:384..548Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 385..548 +
1691679135.4254193-UTR-H-elongata_contig12370:384..5481691679135.4254193-UTR-H-elongata_contig12370:384..548Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 385..548 +
1622929728.7422166-UTR-H-elongata_contig12370:1095..11271622929728.7422166-UTR-H-elongata_contig12370:1095..1127Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 1096..1127 +
1691679135.4368272-UTR-H-elongata_contig12370:1095..11271691679135.4368272-UTR-H-elongata_contig12370:1095..1127Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 1096..1127 +
1622929728.7906525-UTR-H-elongata_contig12370:2046..45511622929728.7906525-UTR-H-elongata_contig12370:2046..4551Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 2047..4551 +
1691679135.4642234-UTR-H-elongata_contig12370:2046..45511691679135.4642234-UTR-H-elongata_contig12370:2046..4551Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig12370 2047..4551 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929728.7619717-CDS-H-elongata_contig12370:1127..12581622929728.7619717-CDS-H-elongata_contig12370:1127..1258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12370 1128..1258 +
1691679135.4460304-CDS-H-elongata_contig12370:1127..12581691679135.4460304-CDS-H-elongata_contig12370:1127..1258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12370 1128..1258 +
1622929728.776423-CDS-H-elongata_contig12370:1733..20461622929728.776423-CDS-H-elongata_contig12370:1733..2046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12370 1734..2046 +
1691679135.4549644-CDS-H-elongata_contig12370:1733..20461691679135.4549644-CDS-H-elongata_contig12370:1733..2046Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig12370 1734..2046 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig12370.1788.1

>prot_H-elongata_contig12370.1788.1 ID=prot_H-elongata_contig12370.1788.1|Name=mRNA_H-elongata_contig12370.1788.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=148bp
MAFLESFNATVSNNTFENNKYGIRFSVGSAYSYFTDNVIKNSTKYNIYTY
EGSDDPDVVDSGRPQSNVFSDNLIVGSSEAIKLKQSDDMQFFDNTFVNTT
TTRFDNSTYVSMLGNSGLDLDEVELKVTNGACFDDSSDSEYVPICDE*
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mRNA from alignment at H-elongata_contig12370:385..4551+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig12370.1788.1 ID=mRNA_H-elongata_contig12370.1788.1|Name=mRNA_H-elongata_contig12370.1788.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4167bp|location=Sequence derived from alignment at H-elongata_contig12370:385..4551+ (Himanthalia elongata Himel1 dioecious)
ATACACCTCGCTCCTGGCATACCAATGTCCACTATGGTCCTGTTCTCGAT
ATCCTCCATACCACCATGCTTTCGTTTCCTCTCAGGGAAACGAGGTGTAC
GGCGGAGGAGACATTTCAGCCGGTATTTTCCTCCACCGCTCAAGTGATAA
CGCGACCGTCAAGGGTGAGAAGAGTGCTCGTGGACATGGGCCCTGTCAGT
CCTTTATTTGAAAACATGCGATAGAAGCTTGCCGTCCCGCCGCTCATCCT
TTCTTAAGCACTCCCTGCCTTGCTCCTTCTACATTACCCCCACATCCCTT
TATCTCACCTACGAAAACCTTGCTTGGGGTTTTGACTCTCCCCATGCCTA
ATTAGACAGGCGGCGTTCTCGAGGCGTGTGAGACAAAATGTGTTATTTTG
GCTAGGCGGGGCAGGGTCGAAGTAGAAGAAAGCACTCCTTCCAGGCAGAC
AATAGACTGGCGAAATTATTCGGACGAGCAGTCAATCGAGGGATACAAAT
CCAAATAGGGCGTCTCTGTCTTACGAGTATACTGTGGTTTGGTTGTCGAG
AGAGCGTGTTACAATTGGTAAATCATTCAACCCACATCCTTAACTCTCGG
CCTTTGGGTAGGACCTAACATGCAAACAAGGTATTGACGATTCTCACTCG
TTAGATATATGCACGTAACGTCGAACCTTTCGAAATATCACGCTCAAATC
AAATCGTACAGGAAACTACGTCCACGACAACGGCGACGCTGGCATGGCCT
TCCTTGAGAGCTTTAACGCCACCGTGTCCAACAACACCTTCGAAAACAAC
AAGTATGGCATAAGGTTCTCCGTAGGGTCTGCCTACAGCTACTTCACCGA
CAACGTCATAAAAAACAGCACCAAGTAAGCGTTTTTCTCATATTTTCCCT
CATTTACCTCCTCCTTCTCCCTCTCCTCCTGATCTTCAAATCGTTTGGTA
ATAATAGCTAGAGGTGCGTGCCTGCCACACGTGATTTTTGCGTAATCAGC
AAATTCCAAAACTCATCTTTGCTTGCTGGAGGGTTTCGTTTTGTGTTTGT
TTTGTTTTTGTTTTACCTTGTGCTATGAGCGGTAGAGGTGGGGGCACATT
GAAACACTGGTTCAGTCGTACACCACGCAATAATAATAGTGGCTCTCGTT
CATACCGTAAGATTATGCATGCCTCCGTATTTCCCTGCCATGATGTTGCC
GTGTTACACACACATAGTGGTCACCCTGAACCCCGCTGATGTCGCTTCTA
TGCTCCATGTACCCTATACCCTATACAATGCACCCTACACCATTAAACTG
TACCCTGTACCATGCGCGTGTCGTGATTCACCTAAACAATAACAAAAAGG
TACAACATTTACACATACGAGGGAAGCGATGACCCGGATGTAGTCGACAG
CGGCCGCCCGCAGAGTAATGTGTTTTCAGACAACCTTATAGTCGGTTCAA
GCGAGGCCATCAAGCTCAAGCAATCGGACGACATGCAGTTCTTTGACAAC
ACCTTCGTCAATACGACGACAACCCGATTTGACAACTCCACCTACGTCTC
AATGCTGGGCAACTCGGGGCTCGACCTGGACGAGGTGGAGCTGAAGGTCA
CCAACGGGGCATGCTTCGACGACTCCTCGGACTCGGAGTACGTTCCCATC
TGCGACGAATAGAGTGGTAAAACAAGCACCAAAACGTAACTAGTTGATAG
TTATGCGTGTGTGTAACGGTACGCGTGCGAGTTCCGCTTACTATAATGGC
ATATCTTATGTTTCTATGATATATGTAAATATTTGGCTTTATACAGACAT
AAGATATATAGGCGGGCAGGTAAACAAGCAGAAGGGCAAAACGCGCGTTC
CTGGTTCTCTCAGCTCCGCCATGCTTTAAGGCGCCAACATAGAGGAGGGA
GAGGTTGAAACACGTTACCGTTTCACAGACCGAGGAGGGTAAATTTGGTT
CAGCTGGACTTTCCTCGAATAACGACGACTTCGGCTGTCGCTGTATCACT
AATCTATGGATGTCCTCTCTCACACCTTCAGTGAAATATGTTGATGGACT
AAACGTCGATAATTGGTCGATGATTGTGATGGAACACAAAGAAAGGCTAA
GAAATGCGCGACACATTTACGTCGTTTGTGCTCGAGTGGTTTGCTTTTTG
TTTTTTTGACACGCACACCTTAGTTTTGTGCGAAATATGTATCTTCTTGA
AGACAGCGTCACGCTTACACATCGCAATGTGTAACAATATTGGGGTTACT
GTGGTTGATTTGGCAAAAGGAGTGGTAAATTTGTATCAAACCTGTCGAGG
GAGGTGGTACCATAAATTGTAAGATTGCGTCTTGATGCAATTACTGTACG
TTGGAAGCCACATCTCCTGCCCCTCCGCAGAGGACTTTCTCGGTTGGGTT
CCACATTTTTCAGGTGCATATTGTTGTAAACGTACTATGCACCACACGGA
GAAAACGCCCCCAGTGTTGATTGACCCTCTCCCTTCGGCGGTTTGTCTTG
TGCACTTCGACGGTTGATTTGGCTCGTGTGTCACTCCTTCCTCTTTTGTC
CCGTTTGGTATTTAGGAGGGGGGGGGCGGATGGAGGCTTATTAGTAGTAG
CAGCCTGCTTTATCGAGTAATGGCCGACGGATGGCGGAGTATAGACCTCA
TGAAAGGTTAGAACTGGCGAATGCTTTCACGCCACATCGTGTTATGTATG
ATTTGATGACGTGGGGCGACAGAGGGAGTACATGTTTTTGTGTTGTTTCA
TTGTTTTAACGGGGACAGGGGAAAATTGTTTTCCCTGTTCAGCTGATCAC
GAGCAGAAGGCAACCATATCCTGCTCTTCCTTCTGCTAAAAGTGCGACCA
GCAACAACAACAACAAGTGTGGGTGGTCAGCGTCCCGCCCCACAGGAGCA
CTACCTCCTGTTCTTAGCGATCTATGGTAGTGGCGTAGGCATGATTGTTT
GGTGATCCCGTAAAGCCTTTGGTAACAGCTGTATGGTAATATTGAGTCGA
ACGATGATGCTGCACATAAGGGGTGGTGGTGTGTCTTTCACTGAGTTTTC
ATATATTGTACCGTGTCGATGATGCCCGGTTGGTTCTTCTTGCTGGCGAG
TTGTGACAACACATACCCTGCTTGTGTGCTCCTTTTGTATCGCTTTGTTT
CATGGCATAATGCTATACAAGTACCATGAATGGGGGTTTTGTGCATAGGA
CGTCTTGTACGCCTCAGGCGAAAAAGTATACATGTCCTACAAAGGGTAGT
TGCTATACGCCTTCAGCTAAACGCATCTATACCGTTCACAGGGTATTGTA
TGATGAACCCGGTAGAAGATAAATTGTCGACATAAACAAGTCTTTCTCGT
TATTCTGCTCCGACAGCAGGAATTCCGAGGAAGACTGGTTATCGATAACG
TGGGCCATTTCGCCCAGCGCTTTTTTTGTGTGTCTGTAGCGGAAATTAAT
CGTGGCGCTTATCGCTGCATGAGAGAAAGCAGTAAGGAGTTCGTTCGTGA
CTCCTGTTAATCGAAGCCAGCACCCAGCACATCAGTGAAACGTGCAATGG
ACTCAATGGGGTACCGAGACGTGGATGCGGGGTCATATCTGATTGGAATT
ATGTAAAGTTACTGTAGCTGAATCTCGATCGGCCTTGTCGTAAGAAATGG
AGTATTACATCAATCCCTCAGCAAGGTTCCTTGAGAACATGAGACAATTC
CTATACTGGTGGTTTGGGCGGTCTCGGGTAGATATATTTGGTATTCGGTA
TCATAGGTGAGAGATTTGTACATCATTTGGTACATCATTTGATATATCAT
TTGATACATCATTTGACTGTGTAGACCATCCATATTGATATAAAGTACGT
ATTCAGCATTACATATTTTTGTATCTCGCTATAGCCAAGTGCCAGTAACG
ACTCAATATATTACTAGTGATGTTCGCCTTCTAGTTCGGCTGCTATTGAA
CAACCTGACGATTTTTGGTGCCCTGGACTTCACCTCTCATGGCGTAAAGA
AGGTGTGTATATTCGGAGGGCTTGTTGAATGAGCTTCATATGAATTTTTA
AGTAAAATAAGTGCAATGCAAAATCGCACGAGTCACACACGTACAGTAGT
GAATGGATCGTGACCGCTTCGCGTCATGTGCGACGACCACATATTCAATG
TTATTTATTTTAATATT
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Coding sequence (CDS) from alignment at H-elongata_contig12370:385..4551+

>mRNA_H-elongata_contig12370.1788.1 ID=mRNA_H-elongata_contig12370.1788.1|Name=mRNA_H-elongata_contig12370.1788.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=888bp|location=Sequence derived from alignment at H-elongata_contig12370:385..4551+ (Himanthalia elongata Himel1 dioecious)
ATGGCCTTCCTTGAGAGCTTTAACGCCACCGTGTCCAACAACACCTTCGA
AAACAACAAGTATGGCATAAGGTTCTCCGTAGGGTCTGCCTACAGCTACT
TCACCGACAACGTCATAAAAAACAGCACCAAATGGCCTTCCTTGAGAGCT
TTAACGCCACCGTGTCCAACAACACCTTCGAAAACAACAAGTATGGCATA
AGGTTCTCCGTAGGGTCTGCCTACAGCTACTTCACCGACAACGTCATAAA
AAACAGCACCAAGTACAACATTTACACATACGAGGGAAGCGATGACCCGG
ATGTAGTCGACAGCGGCCGCCCGCAGAGTAATGTGTTTTCAGACAACCTT
ATAGTCGGTTCAAGCGAGGCCATCAAGCTCAAGCAATCGGACGACATGCA
GTTCTTTGACAACACCTTCGTCAATACGACGACAACCCGATTTGACAACT
CCACCTACGTCTCAATGCTGGGCAACTCGGGGCTCGACCTGGACGAGGTG
GAGCTGAAGGTCACCAACGGGGCATGCTTCGACGACTCCTCGGACTCGGA
GTACGTTCCCATCTGCGACGAATAGGTACAACATTTACACATACGAGGGA
AGCGATGACCCGGATGTAGTCGACAGCGGCCGCCCGCAGAGTAATGTGTT
TTCAGACAACCTTATAGTCGGTTCAAGCGAGGCCATCAAGCTCAAGCAAT
CGGACGACATGCAGTTCTTTGACAACACCTTCGTCAATACGACGACAACC
CGATTTGACAACTCCACCTACGTCTCAATGCTGGGCAACTCGGGGCTCGA
CCTGGACGAGGTGGAGCTGAAGGTCACCAACGGGGCATGCTTCGACGACT
CCTCGGACTCGGAGTACGTTCCCATCTGCGACGAATAG
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