prot_H-elongata_contig1236.1779.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1236.1779.1
Unique Nameprot_H-elongata_contig1236.1779.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
BLAST of mRNA_H-elongata_contig1236.1779.1 vs. uniprot
Match: D8LEG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG6_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 2.890e-104
Identity = 155/210 (73.81%), Postives = 184/210 (87.62%), Query Frame = 0
Query:    1 MEDLALVAAENSELARHRADAIGLDVETAEKARKLVFDHDPLNNTSSPYRGKNYKLLLDMITRAAVRAYRSELRISGDRYTLNWVEKFMHRNDVLGGPTLKGNELVESIMDGPVVVIKDPRTEKNRVIDPGHIGKQIMGFRQLEAQLVVKAMNSVPDDHAMLSRQFLEERLRDQMEDVVLKQRRRRIVEASAPRDQFPDAEDSDEHGSFE 210
            ++DL+L++AENSE+ RHR D++ LD E+ ++ RKLVFDHDPLNNTSSPYRGKNYKLLLDMIT+AAVRAYRSELR+SGDRYTLNW+EKFMHRND+  GP LKGN+LVE+I+DGP+VVIKDPRTEKNRVIDPGHIG Q+M FRQLEAQLV +AM S+P DH  L RQFLEER+RDQ+++VVL QRR+RIVEASAP+D FP A+ S     FE
Sbjct:  204 IQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVFDHDPLNNTSSPYRGKNYKLLLDMITKAAVRAYRSELRVSGDRYTLNWLEKFMHRNDMEDGPNLKGNDLVEAIIDGPIVVIKDPRTEKNRVIDPGHIGGQLMNFRQLEAQLVTEAMESIPSDHVELKRQFLEERMRDQLDNVVLTQRRKRIVEASAPKDDFPSADSSTPQEGFE 413          
BLAST of mRNA_H-elongata_contig1236.1779.1 vs. uniprot
Match: A0A836CAL6_9STRA (Alpha-type protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL6_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.230e-29
Identity = 70/185 (37.84%), Postives = 117/185 (63.24%), Query Frame = 0
Query:    1 MEDLALVAAENSELARHRADAIGLDVETAEKARKLVFDHDPLN-NTSSPYRGKNYKLLLDMITRAAVRAYRSELRISGDRYTLNWVEKFMHRNDVLGGPTLKGNELVESIMDGPVVVIKDPRT----EKNRVIDPGHIGKQIMGFRQLEAQLVVKAMNSVPDDHAMLSRQFLEERLRDQMEDVVL 180
            M DL L+  EN EL RH  D + ++ + A++AR+L F +DP   N  SP   +NY+ L++++T+ A+R Y +ELR++G RY  NW+E+F+    V  G  L GN+L+E++++GP+++I +P+     +K ++I+P  I + +M  R   A      + S+PDDHA L R FLE++L  Q + +V+
Sbjct:  522 MRDLQLMDQENHELLRHHDDLLVMNADEADRARQLFFYNDPWGTNAKSPLHQQNYRELIELVTKVALRRYETELRMTGQRYHANWLERFL----VKAGDNLVGNDLMEAMLEGPMMMI-NPKVSGSADKPKMINPLQIAQGVMKRRVAAAAEFRSMLTSIPDDHAQLMRTFLEQQLGAQADSLVM 701          
BLAST of mRNA_H-elongata_contig1236.1779.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.360e-18
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   45 TSSPYRGKNYKL--------------------------LLDMITRAAVRAYRSELRISGDRYTLNWVEKFMHRNDVLGGPTLKGNELVESIMDGPVVVIKDP---RTEKNRVIDPGHIGKQIMGFRQLEAQLVVKAMNSVPDDHAMLSRQFLEE 169
            T  PYRGKNY+                           LL M+TR AVR Y +ELR SG RY  NW+E+FM +    GG  LKGN L+ES+++GP+++I       ++K RVI+P  I K +M  R   A+ +   + +VP DH  L    LE+
Sbjct:  236 TKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFMLK----GGKGLKGNALLESMLNGPMMMINPKVRGNSDKPRVIEPAQIAKGVMLRRATAAEEIRTILGTVPGDHLRLKASMLEQ 385          
BLAST of mRNA_H-elongata_contig1236.1779.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.100e-13
Identity = 46/148 (31.08%), Postives = 79/148 (53.38%), Query Frame = 0
Query:   36 VFDHDPLNNTSSPYRGKNYKLLLDMITRAAVRAYRSELRISGDRYTLNWVEKFMHRNDVLGGPTLKGNELVESIMDGPVVVIKDPRTE-KNRVIDPGHIGKQ----------IMGFRQLEAQLVVKAMNSVPDDHAMLSRQFLEERLR 172
            V D D +N+T +PYR   Y  +L ++T+ ++  Y+ ELRI GD++TL W++K    N      TL GN+L+E++++GP+V+I D +   + +V+ P  +             +M  R    +     +  VP +H  L +  LE +LR
Sbjct:  175 VVDTDAINSTDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDKIGDAN-----LTLSGNDLIEAMLNGPMVLINDGKDRARPKVVQPLRVAADXXXXXXXXXXVMALRVSVVREFKGLLAGVPQEHQALIQGVLERQLR 317          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1236.1779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEG6_ECTSI2.890e-10473.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAL6_9STRA1.230e-2937.84Alpha-type protein kinase domain-containing protei... [more]
A0A835YQU4_9STRA5.360e-1837.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7Q1_9STRA1.100e-1331.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1236contigH-elongata_contig1236:3985..6207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1236.1779.1mRNA_H-elongata_contig1236.1779.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1236 3956..9150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1236.1779.1 ID=prot_H-elongata_contig1236.1779.1|Name=mRNA_H-elongata_contig1236.1779.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
MEDLALVAAENSELARHRADAIGLDVETAEKARKLVFDHDPLNNTSSPYR
GKNYKLLLDMITRAAVRAYRSELRISGDRYTLNWVEKFMHRNDVLGGPTL
KGNELVESIMDGPVVVIKDPRTEKNRVIDPGHIGKQIMGFRQLEAQLVVK
AMNSVPDDHAMLSRQFLEERLRDQMEDVVLKQRRRRIVEASAPRDQFPDA
EDSDEHGSFEA*
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