prot_H-elongata_contig123577.1778.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123577.1778.1
Unique Nameprot_H-elongata_contig123577.1778.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length75
Homology
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: D8LE51_ECTSI (SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE51_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.520e-28
Identity = 52/75 (69.33%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAFV 75
            MI SCVR+PE + +G  GS  G  GIGF++DWRRLNVAITRAK++MWI+GHAGVL+QS +WRELINDSK+R AF+
Sbjct:  984 MIFSCVRAPELQRSGDSGSSSG-GGIGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRNAFI 1057          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A6H5JS06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS06_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.830e-28
Identity = 51/75 (68.00%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAFV 75
            MI SCVR+PE + +G  GS  G  G+GF++DWRRLNVAITRAK++MWI+GHAGVL+QS +WRELINDSK+R AF+
Sbjct: 1175 MIFSCVRAPELQRSGDSGSSSG-GGVGFLDDWRRLNVAITRAKFAMWIVGHAGVLKQSTDWRELINDSKKRDAFI 1248          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A1G4KDX5_9SACH (LAMI_0H01640g1_1 n=1 Tax=Lachancea mirantina TaxID=1230905 RepID=A0A1G4KDX5_9SACH)

HSP 1 Score: 77.0 bits (188), Expect = 9.490e-15
Identity = 34/74 (45.95%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAF 74
            +I+SCVR+ + +           +G+GF+ D+RR+NVA+TRAK SMWI+GH   L +++ WR+LIND++ RG F
Sbjct: 1766 IIISCVRADDSK-----------SGVGFLKDFRRMNVALTRAKASMWILGHYSSLSKNKMWRDLINDARDRGCF 1828          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A5C7HAQ7_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HAQ7_9ROSI)

HSP 1 Score: 76.3 bits (186), Expect = 1.750e-14
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAF 74
            I SCVR+ E+E AGS   K+G   IGF+ D+RR+NVAITRAK S+ ++G A  L++ E W  LI  ++ RG F
Sbjct:  884 IFSCVRAKEKEKAGSKKEKKG---IGFVADYRRMNVAITRAKSSVLVVGSASTLRKDEHWNNLIESAENRGCF 953          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: UPI000D1C60C4 (helicase sen1-like isoform X1 n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C60C4)

HSP 1 Score: 75.5 bits (184), Expect = 3.270e-14
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAFV 75
            +I+SCVR+               +G+GF+ D RR+NVA+TRA+ S+W+IG+AG L+QSE+W +LI D+K R  F+
Sbjct:  995 IIMSCVRASN-------------HGVGFVADIRRMNVALTRARRSLWVIGNAGTLEQSEDWAKLIEDAKSRNCFI 1056          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A7H9HU86_9SACH (Uncharacterized protein n=2 Tax=Torulaspora TaxID=4948 RepID=A0A7H9HU86_9SACH)

HSP 1 Score: 73.6 bits (179), Expect = 1.570e-13
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAF 74
            +++SCVR+ + +           +G+GF+ D+RR+NVA+TRAK SMWI+GH   L ++  WR+LIN++K RG  
Sbjct: 1749 IVISCVRADDSK-----------SGVGFLKDFRRMNVALTRAKTSMWILGHQSSLTKNRLWRDLINNAKERGCL 1811          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A1E3PFB1_9ASCO (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Nadsonia fulvescens var. elongata DSM 6958 TaxID=857566 RepID=A0A1E3PFB1_9ASCO)

HSP 1 Score: 72.8 bits (177), Expect = 2.910e-13
Identity = 37/74 (50.00%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAF 74
            +ILSCVRS +             NG+GF+ND RR+NVAITRAK S+WI+G+   L +S+ W  LI D+K R AF
Sbjct: 1216 IILSCVRSGQS------------NGVGFLNDIRRMNVAITRAKSSLWILGNEPTLLKSKVWERLILDAKNRDAF 1277          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: F4R848_MELLP (Uncharacterized protein n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4R848_MELLP)

HSP 1 Score: 72.4 bits (176), Expect = 2.950e-13
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAF 74
            +ILSCVR          G K   NGIGF+ D RR+NVA+TRAK S+++IG+   L Q + W+ LI+D++ RG F
Sbjct:  267 IILSCVR----------GGKDDDNGIGFLKDTRRMNVALTRAKSSLFVIGNQSALVQDKNWKALIDDARERGTF 330          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: B8CEE9_THAPS (AAA_12 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEE9_THAPS)

HSP 1 Score: 69.7 bits (169), Expect = 4.390e-13
Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELI 65
            +ILSCVRS      G+     G N +GF+ND+RR+NVA+TRAK S+WI+G++ VL+ S  W +LI
Sbjct:   87 IILSCVRSHSNRGGGN-----GRNNVGFLNDYRRVNVALTRAKCSLWIVGNSEVLKSSNLWSKLI 146          
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Match: A0A022R545_ERYGU (Uncharacterized protein (Fragment) n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R545_ERYGU)

HSP 1 Score: 72.0 bits (175), Expect = 5.170e-13
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = 0
Query:    1 MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIGHAGVLQQSEEWRELINDSKRRGAFV 75
            +I+SCVR+               +G+GF++D RR+NVA+TRAK ++W++G+A  L QSE+W  LIND+K R  ++
Sbjct:  314 IIMSCVRASS-------------HGVGFVSDIRRMNVALTRAKRALWVMGNANALMQSEDWAALINDAKARNCYL 375          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123577.1778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE51_ECTSI1.520e-2869.33SEN1 protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JS06_9PHAE2.830e-2868.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1G4KDX5_9SACH9.490e-1545.95LAMI_0H01640g1_1 n=1 Tax=Lachancea mirantina TaxID... [more]
A0A5C7HAQ7_9ROSI1.750e-1450.68Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
UPI000D1C60C43.270e-1445.33helicase sen1-like isoform X1 n=4 Tax=Selaginella ... [more]
A0A7H9HU86_9SACH1.570e-1343.24Uncharacterized protein n=2 Tax=Torulaspora TaxID=... [more]
A0A1E3PFB1_9ASCO2.910e-1350.00p-loop containing nucleoside triphosphate hydrolas... [more]
F4R848_MELLP2.950e-1347.30Uncharacterized protein n=1 Tax=Melampsora larici-... [more]
B8CEE9_THAPS4.390e-1350.77AAA_12 domain-containing protein n=1 Tax=Thalassio... [more]
A0A022R545_ERYGU5.170e-1342.67Uncharacterized protein (Fragment) n=1 Tax=Erythra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041679DNA2/NAM7 helicase-like, AAA domainPFAMPF13087AAA_12coord: 2..52
e-value: 3.0E-14
score: 53.1
NoneNo IPR availableGENE3D3.40.50.300coord: 1..75
e-value: 3.2E-20
score: 74.2
NoneNo IPR availablePANTHERPTHR10887:SF382HELICASE SENATAXIN-RELATEDcoord: 2..74
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 2..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123577contigH-elongata_contig123577:366..590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123577.1778.1mRNA_H-elongata_contig123577.1778.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123577 351..590 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123577.1778.1 ID=prot_H-elongata_contig123577.1778.1|Name=mRNA_H-elongata_contig123577.1778.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp
MILSCVRSPEEELAGSYGSKQGYNGIGFMNDWRRLNVAITRAKYSMWIIG
HAGVLQQSEEWRELINDSKRRGAFV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041679DNA2/NAM7-like_AAA