prot_H-elongata_contig123309.1765.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig123309.1765.1
Unique Nameprot_H-elongata_contig123309.1765.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
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BLAST of mRNA_H-elongata_contig123309.1765.1 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.290e-43
Identity = 83/115 (72.17%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:    1 PLLRTYPLSRRGVALTALSRAFFLVPRRFTRLPLAAASRGGQGGANSHSLAEWRSAEGWYGTLTKAHSHLCADLNDDVRALPRCPFAVGLLKSKLSLLHICLGRTTAAADKSQVV 115
            P  +T  L   G AL+ L+R  +   RRFT+LP AAASRGG GG++  +LAEWRS EGWYGTL KAHSHLCADLNDDVRALPRCP AVGLLKSKLS LH CLGRTTAAADKSQV+
Sbjct:  826 PRQQTPMLITEGNALSLLNRLSWDTLRRFTKLPFAAASRGGHGGSSCQALAEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVM 940
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BLAST of mRNA_H-elongata_contig123309.1765.1 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 4.500e-43
Identity = 82/115 (71.30%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:    1 PLLRTYPLSRRGVALTALSRAFFLVPRRFTRLPLAAASRGGQGGANSHSLAEWRSAEGWYGTLTKAHSHLCADLNDDVRALPRCPFAVGLLKSKLSLLHICLGRTTAAADKSQVV 115
            P  +T  L   G AL+ L+R  + + RRFT+LP AAASRGG GG++  +L EWRS EGWYGTL KAHSHLCADLNDDVRALPRCP AVGLLKSKLS LH CLGRTTAAADKSQV+
Sbjct:  866 PRQQTPMLITEGNALSLLNRLSWDMLRRFTKLPFAAASRGGHGGSSYQALVEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVM 980
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig123309.1765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM09_ECTSI1.290e-4372.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV62_9PHAE4.500e-4371.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig123309contigH-elongata_contig123309:135..1695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig123309.1765.1mRNA_H-elongata_contig123309.1765.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig123309 135..1695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig123309.1765.1 ID=prot_H-elongata_contig123309.1765.1|Name=mRNA_H-elongata_contig123309.1765.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
PLLRTYPLSRRGVALTALSRAFFLVPRRFTRLPLAAASRGGQGGANSHSL
AEWRSAEGWYGTLTKAHSHLCADLNDDVRALPRCPFAVGLLKSKLSLLHI
CLGRTTAAADKSQVV
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