prot_H-elongata_contig122978.1749.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig122978.1749.1
Unique Name	prot_H-elongata_contig122978.1749.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	72

Homology

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: D8LQY6_ECTSI (Ap4A phosphorylase II n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY6_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 8.190e-26
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0

Query:    8 MTSQAAVAAPPSTAASTDPFDSRVLDPRMELPPAHSLVLNKFNTVRNHALIITKEFQSQEEALTE 72
            + ++AA+A PP++AAS DPFD RVLDPRMELPP+HSLVLNKFNTVRNHALIIT EFQSQ+EALTE
Sbjct:  219 LEAKAAIATPPASAASDDPFDPRVLDPRMELPPSHSLVLNKFNTVRNHALIITTEFQSQQEALTE 283

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: A0A6H5L694_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L694_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 2.430e-23
Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 0

Query:    8 MTSQAAVAAPPSTAASTDPFDSRVLDPRM---ELPPAHSLVLNKFNTVRNHALIITKEFQSQEEALTE 72
            + ++AA+A PP++AAS DPFD RVLDPRM   ELPP+HSLVLNKFNT+RNHALIIT EFQSQ+EALTE
Sbjct:  374 LEAKAAIATPPASAASDDPFDPRVLDPRMAVEELPPSHSLVLNKFNTMRNHALIITTEFQSQQEALTE 441

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: A0A8J4EWE9_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EWE9_9CHLO)

HSP 1 Score: 51.6 bits (122), Expect = 7.250e-6
Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 0

Query:   18 PSTAASTDPFDSRVLDPR-----MELPPAHSLVLNKFNTVRNHALIITKEFQSQEEAL 70
            P+ A+S  P+ +  L P       EL   HSLVLNKFN V++H L+IT+EF+SQ E L
Sbjct:  193 PTAASSAPPWRNPFLPPEPELFVRELDAEHSLVLNKFNVVQHHVLVITREFRSQAEPL 250

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: A0A150H394_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H394_GONPE)

HSP 1 Score: 50.8 bits (120), Expect = 1.330e-5
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0

Query:   38 LPPAHSLVLNKFNTVRNHALIITKEFQSQEEAL 70
            L PAHSLVLNKFN VR+H ++IT+EF+SQ E L
Sbjct:  115 LGPAHSLVLNKFNVVRHHTIVITREFRSQAEPL 147

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: A0A8J4DBT7_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4DBT7_9CHLO)

HSP 1 Score: 49.7 bits (117), Expect = 3.470e-5
Identity = 28/58 (48.28%), Postives = 36/58 (62.07%), Query Frame = 0

Query:   18 PSTAASTDPFDSRVLDPRMEL-----PPAHSLVLNKFNTVRNHALIITKEFQSQEEAL 70
            P+ A S  P+ +  L P  EL        HSLVLNKFN V++H L+IT+EF+SQ E L
Sbjct:  185 PTAALSPPPWRNPFLPPEPELFVRQLGAEHSLVLNKFNVVQHHVLVITREFRSQAEPL 242

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BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Match: A0A6T6N5E7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6N5E7_9RHOD)

HSP 1 Score: 49.3 bits (116), Expect = 4.450e-5
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 0

Query:   37 ELPPAHSLVLNKFNTVRNHALIITKEFQSQEEALT 71
            + PP H+L+LNKFN V NH LI+TKEF+ Q   LT
Sbjct:   73 DAPPCHALLLNKFNVVDNHLLIVTKEFEDQSSLLT 107

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot

BLAST of mRNA_H-elongata_contig122978.1749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6


Match Name	E-value	Identity	Description
D8LQY6_ECTSI	8.190e-26	80.00	Ap4A phosphorylase II n=1 Tax=Ectocarpus siliculos...	[more]
A0A6H5L694_9PHAE	2.430e-23	75.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A8J4EWE9_9CHLO	7.250e-6	48.28	Uncharacterized protein n=1 Tax=Volvox africanus T...	[more]
A0A150H394_GONPE	1.330e-5	69.70	Uncharacterized protein n=1 Tax=Gonium pectorale T...	[more]
A0A8J4DBT7_9CHLO	3.470e-5	48.28	Uncharacterized protein n=1 Tax=Volvox reticulifer...	[more]
A0A6T6N5E7_9RHOD	4.450e-5	60.00	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.428.70		coord: 5..72 e-value: 2.8E-12 score: 48.6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..72
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig122978	contig	H-elongata_contig122978:656..1700 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig122978.1749.1	mRNA_H-elongata_contig122978.1749.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig122978 656..1706 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig122978.1749.1 ID=prot_H-elongata_contig122978.1749.1|Name=mRNA_H-elongata_contig122978.1749.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MYPYYFFMTSQAAVAAPPSTAASTDPFDSRVLDPRMELPPAHSLVLNKFN
TVRNHALIITKEFQSQEEALTE