prot_H-elongata_contig122968.1748.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122968.1748.1
Unique Nameprot_H-elongata_contig122968.1748.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length64
Homology
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KVG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVG7_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 5.160e-18
Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSS RSKHIDVR+HFIREL  SG + VE+V+++ QHAD+LTKAL     + HR ALMNLP+
Sbjct:   78 LSSARSKHIDVRFHFIRELFKSGRISVEYVSTDEQHADLLTKALCRVKLEYHRKALMNLPE 138          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KU04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU04_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.210e-16
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    2 SSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLP 60
            SS RSKHIDVR+HFIREL  SG + VE++ ++ QHAD+LTKAL     + HR ALMN+P
Sbjct:   52 SSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNMP 110          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.050e-16
Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSSGR+KHIDVR+HFIR L  SGN+ V  V +  QHADVLTKAL  A  + HR  LMNLP+
Sbjct:  172 LSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 232          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5JJC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC5_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 5.680e-16
Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSSGR+KHIDVR+HFIR L  SG + V+ V +  QHAD+LTKAL  A  + HR  LMNLP+
Sbjct:   57 LSSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASLQYHRRKLMNLPE 117          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5JBC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.210e-16
Identity = 37/60 (61.67%), Postives = 44/60 (73.33%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLP 60
            LSSGR+KHIDVR+HFIR L  SG + V+ V +  QHAD+LTKAL  A  + HR  LMNLP
Sbjct:    8 LSSGRTKHIDVRFHFIRGLFRSGEISVKFVPTTEQHADLLTKALSRASRQYHRRKLMNLP 67          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KEN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN1_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.540e-15
Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSSGRSKHIDVR HF+R L   G +++ HV+S+ QHA +LTKALP  LF+ HR  ++ L +
Sbjct:   68 LSSGRSKHIDVRHHFLRSLTEEGRIKISHVSSKEQHAAILTKALPRELFEVHRNFVLGLSE 128          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5K9S5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S5_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.020e-15
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSSGR+KHIDVR+HFIR L  SG++ V+ V +  +HAD+LTKAL  A  + HR  LMN+P+
Sbjct:   52 LSSGRTKHIDVRFHFIRGLFGSGDISVKFVPTTERHADLLTKALSRASLQYHRRKLMNMPE 112          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KQ33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ33_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.170e-15
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 SGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLP 60
            S RSKHIDVR+HFIREL  +G +  ++V++E QHAD+LTK L     + HR ALMNLP
Sbjct:   43 SARSKHIDVRFHFIRELFKAGKITADYVSTEEQHADMLTKVLGRGKLEYHRKALMNLP 100          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KQX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX9_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.660e-15
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    2 SSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLP 60
            SS RSKHIDVR+HFIREL  SG +  E+V +  QHAD+LTK L     + HR ALMNLP
Sbjct:   50 SSARSKHIDVRFHFIRELFKSGKITAEYVPTGEQHADMLTKVLGREKLEYHRKALMNLP 108          
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Match: A0A6H5KLA3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLA3_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 3.990e-15
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    1 LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFKRHRAALMNLPD 61
            LSSGR+KHIDVR+HFIR L   G + V+ V +  QHADVLTKAL  A  + HR  LMNLP+
Sbjct:   95 LSSGRTKHIDVRFHFIRGLFRLGEISVKFVPTTEQHADVLTKALSRASLQYHRRKLMNLPE 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122968.1748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVG7_9PHAE5.160e-1863.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU04_9PHAE1.210e-1661.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJM0_9PHAE4.050e-1663.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJC5_9PHAE5.680e-1660.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBC8_9PHAE9.210e-1661.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEN1_9PHAE1.540e-1555.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9S5_9PHAE2.020e-1557.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ33_9PHAE2.170e-1558.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX9_9PHAE2.660e-1561.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLA3_9PHAE3.990e-1560.66CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122968contigH-elongata_contig122968:3..194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122968.1748.1mRNA_H-elongata_contig122968.1748.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122968 3..465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122968.1748.1 ID=prot_H-elongata_contig122968.1748.1|Name=mRNA_H-elongata_contig122968.1748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=64bp
LSSGRSKHIDVRWHFIRELIASGNVRVEHVASEWQHADVLTKALPAALFK
RHRAALMNLPDDT*
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