prot_H-elongata_contig99535.17284.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99535.17284.1
Unique Nameprot_H-elongata_contig99535.17284.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 4.110e-23
Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQC----KSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKVM----------ASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK Q+ Q  W VE +G +G+ Y  T   +MQG    D      K +H+Q   +     K H+++LD HASHV+ +V++ ++   I  FQLP H +H+TQ LDV AFG FK+ +T    +F  ++G  +P+K D   ++              +SF+   + P +K+RA+ RL
Sbjct:  222 ISADGHTWAPTIIFKGQRLQADWFVERNGLEGAKYTCTDYSFMQG----DLFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 402          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.400e-22
Identity = 62/181 (34.25%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMV----------RKVMASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IF+ Q+ Q  W  E +G   + Y  T   +MQG V     +   K    +     K H ++LDEHAS+V+ +V++ ++  +I  FQLP H +H+TQ LDV AFG FK+ +T     +   NG  +P+K D   ++           +  ASF    + P D DRA+ RL
Sbjct:   29 ISANGATWAPTIIFRGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYFKDFHKQLDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVDMDRALTRL 209          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 7.880e-22
Identity = 63/181 (34.81%), Postives = 90/181 (49.72%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKVM----------ASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK Q+ Q  W  E +G   + Y  T   +MQG V    ++   K    +     K H ++LD HASHV+ +V++ ++  +I  FQLP H +H+TQ LDV AFG FK+ +T     +   NG  +P+K D   ++              ASF    + P D DRA+ RL
Sbjct:  203 ISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIKYLKDFHKQLDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMDRALTRL 383          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 9.960e-22
Identity = 60/181 (33.15%), Postives = 95/181 (52.49%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKVM----------ASFSVTDIVPFDKDRAMNRL 171
            ISA    + P  IFK Q+ Q  W  E +G +G+ Y  T   +MQG V    ++   K    +     K H+++LD HASHV+ +V + ++   I  FQLP H +H+TQ LDV AFG FK+ +T    +F  ++G  +P+K D   ++              +SF+   + P +K+RA+ +L
Sbjct:  165 ISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQL 345          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.170e-21
Identity = 61/181 (33.70%), Postives = 94/181 (51.93%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKVM----------ASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK  + Q  W VE +G +G+ Y  T   +MQG V    ++   K +  +     K H+++LD H+SHV  +V R ++   I   QLP H +H+TQ LDV AFG FK+ +T    +F  ++G  +P+K D   ++              +SF+   + P +K+RA+ RL
Sbjct:  184 ISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFGERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRL 364          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 3.050e-21
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMV----------RKVMASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK Q+ Q  W  E +G   + Y  T   +MQG V    ++   K    +     K H+++LD HASHV+ + ++ ++  +I  F+LP H +H+TQ LDV AFG FK+ +T     +   NG  +P+K D   ++           +  ASF    + P D DRA+ RL
Sbjct:   29 ISANGATWAPTIIFKGQRLQPDWFAERNGPKDARYTCTDSSFMQGDVFIMYLKDFHKQLDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVDMDRALTRL 209          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 7.970e-20
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMV----------RKVMASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK Q+ Q  W  E +G   + Y  T   +MQG+V    ++   +   ++     K H+++LD HASHV+ +V++ ++  +I  FQLP H +H+TQ LDV AFG FKR +T   + +   +G  +P K D   ++           +  +SF+   + P + +RAM+RL
Sbjct:  207 ISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 387          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5KN20_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN20_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 8.170e-20
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMV 147
            IS  G    P  IFK Q+ Q  W VE +G +G+ Y  T   +MQG V    ++   K    +     K H+++LD HASHV+  V R ++   I  FQLP H +H+TQ L+V AFG FK+ +T    +F  ++G  +P+K D  S++
Sbjct:  263 ISVDGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVQVFRLAMNLRIILFQLPSHTSHITQPLNVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPSVI 409          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.430e-20
Identity = 60/181 (33.15%), Postives = 96/181 (53.04%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKW-VETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMV----------RKVMASFSVTDIVPFDKDRAMNRL 171
            ISA G    P  IFK Q+ Q  W  E +G   + Y  T   +MQG+V    ++   +   ++     K H+++LD HASHV+ +V++ ++  +I  FQLP H +H+TQ LDV AFG FKR +T   + +   +G  +P K D   ++           +  +SF+   + P + +RAM+RL
Sbjct:  448 ISADGSTWAPTIIFKGQRLQPDWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRL 628          
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Match: A0A6H5KS64_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS64_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 4.360e-19
Identity = 59/180 (32.78%), Postives = 88/180 (48.89%), Query Frame = 0
Query:    2 ISATGRVIPPLYIFKSQKFQKKWVETSGSDGSLYEVTYIFYMQGSVLPDCMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLPPHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKV----------MASFSVTDIVPFDKDRAMNRL 171
            I+A G V  P+ IFK Q+F   WV                       P   + L +   R Q  + K+HV++LD HASHV+ DV++ ++  +I   QLP H +H+TQ L+V  FG FK+ +     AF + NG  +P K D   M+              ASF+   + P D++RA++RL
Sbjct:   15 INAAGAVSAPIIIFKGQRFNGDWVADLNG------------------PPVRQELPQAARRPQLARRKTHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSH-SHITQPLNVARFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGPSFTPEINQASFAGAGLWPVDRERALSRL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99535.17284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRA3_9PHAE4.110e-2335.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9B8_9PHAE4.400e-2234.25DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JBS6_9PHAE7.880e-2234.81DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2E0_9PHAE9.960e-2233.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JYS0_9PHAE1.170e-2133.70DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5KGL1_9PHAE3.050e-2133.70DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV04_9PHAE7.970e-2033.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN20_9PHAE8.170e-2037.41DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JJ12_9PHAE8.430e-2033.15Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KS64_9PHAE4.360e-1932.78DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 3..125
e-value: 4.1E-8
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99535contigH-elongata_contig99535:1698..2219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99535.17284.1mRNA_H-elongata_contig99535.17284.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99535 1677..2219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99535.17284.1 ID=prot_H-elongata_contig99535.17284.1|Name=mRNA_H-elongata_contig99535.17284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
MISATGRVIPPLYIFKSQKFQKKWVETSGSDGSLYEVTYIFYMQGSVLPD
CMEVLRKIYHRQQTGQCKSHVVILDEHASHVTRDVLRSSLGNSIDPFQLP
PHFAHVTQLLDVCAFGIFKRYMTITSTAFLSHNGMKIPVKNDTTSMVRKV
MASFSVTDIVPFDKDRAMNRLNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom