prot_H-elongata_contig99529.17283.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99529.17283.1
Unique Nameprot_H-elongata_contig99529.17283.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: D7FJX2_ECTSI (Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX2_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 4.530e-34
Identity = 71/96 (73.96%), Postives = 84/96 (87.50%), Query Frame = 0
Query:    1 MLVLNRTVTLKEASGKAPTAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEK 96
            +LVLNRTVTLKEA+GK+     KSRK++QA  RQAAEKEARK + P+EMFLS TDLYSAFDD+G+PT DK+ EPLSKSA+K+LKKEW+KQKKLYEK
Sbjct:  563 LLVLNRTVTLKEATGKSTVPKDKSRKEIQA--RQAAEKEARKRVPPQEMFLSMTDLYSAFDDQGVPTTDKSGEPLSKSAIKKLKKEWEKQKKLYEK 656          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A6H5JZH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH1_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 3.820e-33
Identity = 70/96 (72.92%), Postives = 83/96 (86.46%), Query Frame = 0
Query:    1 MLVLNRTVTLKEASGKAPTAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEK 96
            +LVLNRTVTLKEA+GK+     KSRK++QA  RQAAEKEARK + P+EMFLS TDLYSAFDD+G+PT DK  EPLSKS++K+LKKEW+KQKKLYEK
Sbjct:  683 LLVLNRTVTLKEATGKSTVPKDKSRKEIQA--RQAAEKEARKRVPPQEMFLSMTDLYSAFDDQGVPTTDKAGEPLSKSSIKKLKKEWEKQKKLYEK 776          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A7S3HDJ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDJ2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.120e-22
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPTAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEKAA 98
            LVLN TV LK++  K    P +SRK+ QA A   A+K AR ++ PEEMF SQTDLYSAFD +GIPT D   E +SKS  K+L+K+W+KQKKL+E A+
Sbjct:   62 LVLNMTVNLKDSKPKEAGMPNRSRKEEQAKA--LADKLARMSIAPEEMFKSQTDLYSAFDAEGIPTHDAAGEKISKSGYKKLRKDWEKQKKLFESAS 156          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A7S3U5L5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5L5_9SPIT)

HSP 1 Score: 93.2 bits (230), Expect = 5.880e-22
Identity = 54/94 (57.45%), Postives = 70/94 (74.47%), Query Frame = 0
Query:    5 NRTVTLKEASGK---APTAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYE 95
            NR + LKE+  K   +  A G+SRKD QA  +Q AEKE++K L P++MFLSQTDLYS FD+ G+PT   + EPL KS +K+LK+EWDKQKK+YE
Sbjct:   61 NRIIGLKESGLKKEESKEAAGRSRKDEQA--KQLAEKESKKKLDPKKMFLSQTDLYSKFDEDGVPTNAADGEPLPKSRIKKLKQEWDKQKKVYE 152          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: C5KVE2_PERM5 (Cysteinyl-tRNA synthetase, putative (Fragment) n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KVE2_PERM5)

HSP 1 Score: 90.9 bits (224), Expect = 1.210e-21
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPTAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYE 95
            L+ N TVTLKE+  K        R   +A A Q AEKEA+K +RPE+MF  QTD YS FD+ GIPT D   E L+KSA K+L KEW+KQ++LYE
Sbjct:    7 LICNLTVTLKESGLKKTEGKHADRSRKEAQAAQLAEKEAKKKIRPEDMFKGQTDKYSKFDEHGIPTHDAGGEKLTKSAYKKLHKEWEKQRRLYE 100          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A7S2USR8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 7.180e-21
Identity = 55/96 (57.29%), Postives = 71/96 (73.96%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPTA-PGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEK 96
            LV NRTVTL+E+  K  ++    SRK+ QA+  Q A K AR+N+ PE+ F SQTD YSAFD +G+PT DK+ EPLSKS +K+LKKE DKQ+KL+ K
Sbjct:  135 LVFNRTVTLRESGPKKESSGDNSSRKEQQAA--QLAAKAARENIAPEDFFKSQTDKYSAFDAEGLPTHDKDGEPLSKSMIKKLKKEQDKQRKLFNK 228          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: W7TED8_9STRA (Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TED8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.010e-20
Identity = 57/97 (58.76%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPT---APGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYE 95
            LVLNR VTLKE+S K      A GK R   +  ARQ  EKEARKNL P++MF ++TD YSAFD+ GIPT D     LSKS VK+LKKEW+KQK+L++
Sbjct:  561 LVLNRVVTLKESSVKKDVSTGADGKGRSRKEEQARQLLEKEARKNLDPKDMFQAETDKYSAFDEDGIPTKDVEGILLSKSLVKKLKKEWEKQKRLFD 657          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A813J454_POLGL (Glutamine--tRNA ligase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J454_POLGL)

HSP 1 Score: 91.7 bits (226), Expect = 2.290e-19
Identity = 56/97 (57.73%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAP---TAPGKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYE 95
            LV NR V LKE S K     +A  +SRKD QA A  AAEK+A+KNL P++MF S+TDLYSAFDD+G+PT   +   + KS +K+LK+EWDKQKKL+E
Sbjct:  632 LVFNRIVGLKENSHKPDKDKSAELRSRKDEQAKA--AAEKDAKKNLDPKQMFRSETDLYSAFDDEGVPTHAADGAAVPKSRIKKLKQEWDKQKKLFE 726          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: C5KE56_PERM5 (Glutamine--tRNA ligase n=5 Tax=Perkinsus TaxID=28000 RepID=C5KE56_PERM5)

HSP 1 Score: 90.5 bits (223), Expect = 5.770e-19
Identity = 54/96 (56.25%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPTAP--GKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYE 95
            L  N TVTLKE+  K       G+SRK+ QA+  Q AEKEA+K +RPE+MF  QTD YS FD+ GIPT D   E L+KSA K+L KEW+KQ++LYE
Sbjct:  563 LTCNLTVTLKESGLKKTEGKHAGRSRKEAQAA--QLAEKEAKKKIRPEDMFKEQTDKYSQFDESGIPTHDAAGEKLAKSAYKKLHKEWEKQRRLYE 656          
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Match: A0A7J6SG79_PEROL (Glutamine--tRNA ligase n=9 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SG79_PEROL)

HSP 1 Score: 89.7 bits (221), Expect = 1.100e-18
Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 0
Query:    2 LVLNRTVTLKEASGKAPTAP--GKSRKDVQASARQAAEKEARKNLRPEEMFLSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEKAAQA 100
            L  N TVTLKE+  K       G+SRK+ QA+  Q AEKEA+K +RP++MF  QTD YS FD+ GIPT D   E L+KSA K+L KEW+KQ++LY + A+A
Sbjct:  564 LACNLTVTLKESGLKKTEGKHAGRSRKEAQAA--QLAEKEAKKKIRPQDMFKDQTDKYSHFDENGIPTHDAAGEKLTKSAFKKLHKEWEKQRRLYYRRAEA 662          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99529.17283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJX2_ECTSI4.530e-3473.96Glutaminyl-tRNA Synthetase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JZH1_9PHAE3.820e-3372.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3HDJ2_9STRA1.120e-2256.70Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3U5L5_9SPIT5.880e-2257.45Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
C5KVE2_PERM51.210e-2154.26Cysteinyl-tRNA synthetase, putative (Fragment) n=1... [more]
A0A7S2USR8_9STRA7.180e-2157.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TED8_9STRA1.010e-2058.76Glutamine-trna ligase n=2 Tax=Monodopsidaceae TaxI... [more]
A0A813J454_POLGL2.290e-1957.73Glutamine--tRNA ligase n=2 Tax=Polarella glacialis... [more]
C5KE56_PERM55.770e-1956.25Glutamine--tRNA ligase n=5 Tax=Perkinsus TaxID=280... [more]
A0A7J6SG79_PEROL1.100e-1853.47Glutamine--tRNA ligase n=9 Tax=Perkinsus olseni Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10890:SF3CYSTEINE--TRNA LIGASE, CYTOPLASMICcoord: 22..94
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 22..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99529contigH-elongata_contig99529:481..1102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99529.17283.1mRNA_H-elongata_contig99529.17283.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99529 481..1117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99529.17283.1 ID=prot_H-elongata_contig99529.17283.1|Name=mRNA_H-elongata_contig99529.17283.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MLVLNRTVTLKEASGKAPTAPGKSRKDVQASARQAAEKEARKNLRPEEMF
LSQTDLYSAFDDKGIPTADKNHEPLSKSAVKRLKKEWDKQKKLYEKAAQA
EAHTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024909Cys-tRNA/MSH_ligase