mRNA_H-elongata_contig995.17280.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Match: D8LBA8_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA8_ECTSI) HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0 Identity = 902/2248 (40.12%), Postives = 1196/2248 (53.20%), Query Frame = 1
Query: 1 LAPNLGLGGIPTQSLIEFRGGGSMLSREILGEMLAASDVGVLNSRDNVGGRYGGXXXXXXRQQRASLDARKRG--GDRWPIEDDMRVPLRCRQK-------DTLSPLR---KDSPVRSARQTWSDAASWAERSISLENNASGYGDQLRCEDPSSRSKPG-NDDIGPSAPSVRRKASIFVSPSKRPRPTAKLFDHDHNPRLLRALNDKTTVTGIAVGSGDKVLRVNGEGRPIDGLRVWRRLVYDRATELEDHIFQSQVDAPRRGRLGKLNLNRMQ-NASMPRREEQA-RDMETIFRGRGEVPDKRITSTREKYCPNPDGVGG---FRPRNKEASRSIHGR---WSLKTEQGRPFDSLVGNGHMSW-------TQTSWGVATCNPPLSPRLTPTVSLRRYLSSLRPFSVDSAQAMLGQPETTRAIDSASTSEFSSCPTTMEKSGF-----MWPVLFVMGHSNPSA-RHPLSVHALPLFDDDTIALIAQASGEPKGTVRTMARVLSRFDFPLLQAMVKRLCRAH----TAGGAGTPSSDAGVRQGEKDSYSAAQSWVRSTKESLIGKSDSVGSRQWTKDEANEPLILSEKLATRAITSGFLGCIFGNDAVRDILNASRPFVAYDLTWRKQGLDSPSPLPLLLREDTGKGREEWVPRRINRYLSDPAVKAGVPLEVDQASKSVSEKNSTSFSKQRSGESLVVM--------LEASDHAYSCLAPDLPCDDGPHSALLPTAHASDMASSSHKRK-------EPESEKEEGVFLDMFVRAVAVKFRVHSLAILHHGGDGDTHASCLQSRGSLELAIEEGIFV--SRMDDKRALREEFGAERRRKTSIGSDEFGLLPLKLLKSDARMRPRRALARAFTFPAREDEEADMVGVYCPRSTPRCLRPGFKGDVTTGMLRHELEMADAAEARLSIRITRKAKAWRIKTHYAGPASAATVTTAKAQGRAEFAIASAPTKDD-ILNVTKERARKAVETIYISVIRRVWKTWVKLTGYRRSLEAAEIFVRLVGAIALGSGVLEPLLRRRKRVWVRRWASAMRAERVLEVQAAAVELERVVRGFLGRARARKRLRNAXXXXXXXXXXXXXXXXXXXRRAKFLRELQAARTVERKRLELVWRRNAIKILEHKRKERAAAKAQSAWRALVLGRRPARLLQRAXXXXXSSVMVQRLWRGSMARGKVDVLLELKRTREAAIRVQTVARGRGIRRIYTPLILRERAASRLCRSWRCATARKRLWLERSRLCLARLANPLSRGFLSRAAVRRIRDERCKKKRAIISACLATQKIFRGKRGRVKARRELLRRCAAVKLQSLAKGMIARRVSRAKSARQRGQISTWTSAVAVQRVWRGITERRRFGQKRLKQRLWNAAFTIQSAYRRYRAHCRRQRCARDRARELAAVDKSGRMTAAAASIDGDERQTTGAGSETHVSSPSPIDLRAHFRAGGDDLPDVLQQGGLGTEAWSGDGNERICSGEETVNAQGRKTEGVAGS----GESTIGVKSPAGVHGESGIISTVSEVGLATLNQKASALEEMGDVALATISAQQSEATETSPTSSRMPLSIPTSTLLEKNVHRPEEGKFLSEDRTSAEVLRPQPLARQKERMAYYEAKSRYLAAQEAAHGASAAKIQAIFHGFLARRVTKSMLENRREAERYHLERVRASILIQAGMRGRVARLRVARKRAVIFEAARREEGLLTIQCALRCHMAKCRLRHLREVEKTKLERLDRMAVRIQARVRGWKTRDVWRKFFKSRALFERERQRQGAQQIQSSWKSKLARSEAERRRSLRDAALLAKELECHLKRILEPTMEREIKHAYAVRIQCWWRRILVMKLKARNIVALEELQKR--GEKDGEKSALVVQCHWRGYRARCFYHDNYTSLFRERERKKYCTECQWEYATRNCGTCLDKFCESCWAKMHSKGARRFHHWEHFTPVSYEQNSSDQHVSAGTSGLDSNANYDNVPDWSTQAEDWNAVRHVQRQIIGDIGAADQQVDAYNQVYDHVPLYPENKIV-DGKKADDVYGNWMQQGLTESDQIWQAST----------PQVGA---YEGGASY--------GLRGGSFPPWSPEATAFNKLSTESTNGWSAGVQGEWMQATPHQWAESAPETAGYYNGHKNVLEVPATDQDFISDGKGADTIIDLEACATPGTVANEAERLVSITTGSGGGDSNSNGGWNDGGLSV---SQTAGEPWCYNEYGQRVCGDWVEYLDESAQATYFYNAATGE 6483
L LGL G+P QSLIEF GGGSMLSRE+LGEMLA +D GVLN+R + G R++ + AR RG D +E+ ++ L C+ + + SP R K P +S ++ ++ +R + + +Q R + + G N + + + SP+KR R K +DHDHNP++LR+L D T +TGIA G+G L+ EGR ++ LR+ RL RATELED IFQSQ +P R LG+L L+R N +P E + ++ + G + + C +PDG GG RPR++ + R S TE P L G+ ++ S V TC+PP SP LTPT SLRRYLSSLRPFS +SA+A G D A+ + P T F WPVLFVMG S P RHPLSVHALPLFDD+ +AL+A A+GEP VR M ++LS FD LLQ+ VKRLC H T GGA +++ A ++W RS L G S + G + +EPL++SE A RA+T+GFLG +FG DAVRDI+ ASRP V +D T +G + +P PL G+ + + R P+ K G E D +S+ ++ + + + + SL + S PC D +LL + + ++ KR+ E +S EEGV + VRA +FRVHSLA+ HH G T + GI++ S +E G RR S GSDE GL PLKL + D R R RR A E+ E D+ GV PRSTPRCLRPG+KG+VT MLR ELE +++ ARL I + RKA+AW+ + A+AA+ + +L +R R+A+ +Y+ IRR W W +LT +RS+EAA RLVGA A+G VLEP LRRR R W+RRWA AMRAERVLEVQAAAVEL+R VRGFLG+ RA KR R+ XXXXXXXXXXXXXXXX RRA+ + E +A T+E+K E VW+R+A+K+L KRKERAA K Q+AW LV GRRP R L+ S+VM+QRLWRG +ARG+ DVL+E K REAA+++Q VARG G R++Y P+ILRERAA+ + R WRCA AR+ +R LA NPL RGFL+R+A +R+ + R ++ RA++ C+A QKIFRGK+GR+KARRELLRRCAAV+LQ + +G RR+SR + R R Q ++W +A+AVQR+WRG+ RR+ GQ+ + RLWNAAFTIQSA+RR RRQ A R E A AAAA G + AG ++ G D ++ G + +GDG G +++ + EG AG+ G + G + A G +G + E+MGDVA+A + +++ SS L A+ P P ++E + YYEAK RYLAAQE AHGASAA+IQA+F + AR+ ++ R +AER RA I EA+RRE+GLLTIQCA+RC++ KCRL+ LR+ E+ K E L RMA RIQA VRG +TR +WRKFF SRAL +RERQR GAQQIQS W+SKLAR+EAERRRS+RDAALLA++LE HLK +LE TME E +HAYA+R+QCWWR IL +K+KAR + L E GE + EK+A +AR FY+ NY L+RERER+K CTECQ EYATR C TC DKFCE CWA++HS GARRFH W F P +Y+ S Q +A S DS YD ST + + D+ ++D Y Q YP ++ D + + GN QQ S Q W T P G+ Y+G SY +P W+PE + ++ + + + W +W +A E GY + V + A + G A + A P AN E +GG S +GG + PW NEYGQRV GDWVEY D++AQA YFYN A+GE
Sbjct: 32 LVQELGLHGVPAQSLIEFEGGGSMLSREVLGEMLAVNDHGVLNARVGATEKSDGGRSKRARRREGASSARSRGKGSDGKVVENRIQTRLLCQAEAPKCLGESSSSPSRVFAKIDPRKSTKRCHNNGVESRQRHY--HDQQALLAEQQRAKQTALIDGDGMNRQRATATAHCEAQQKVAGSPNKRRR--HKRYDHDHNPKVLRSLVDDTIITGIA-GAG--ALKAE-EGRQMEDLRLQLRLACHRATELEDQIFQSQTGSPHRELLGELQLDRAAGNTGIPLLERPSWKERNFVLGPTGSGAKAHRNTDVLERCRSPDGAGGRSPLRPRHRVSPRKTRRTPLDVSFSTE---PPQRLAGSSSLATDIIPRRQANVSDMVTTCHPPQSPPLTPTASLRRYLSSLRPFSANSARAAWG------LADPANGGNPLAGPVTDLTHPFDNGQPRWPVLFVMGESKPPPPRHPLSVHALPLFDDEMVALLAGAAGEPAAKVRMMVQLLSCFDVRLLQSAVKRLCCEHASSRTLGGAARGGRGRHLQRSGAPGP-ATEAWGRSPMPPLPGPS-AAGDAAHSSTSVDEPLLMSEAAARRALTAGFLGGVFGEDAVRDIVVASRPVVVFDSTESAKG-KALTP-PLQGGAVGGERQNDRGDRPEGGSSRAPSWKIGKNAEQDSSSRGGEDEAAATAANEDVTSSLPSVEHRRTWEERNGSSENRRAQGDSPPCTDA--GSLLVNSPRREGGTALGKRQLEVSELVEHDSNPEEGVLVAQLVRAATARFRVHSLAVQHHEHGGVTATN--------HRDFGRGIYIGGSGASGWTEGGQEPGQRLRRPASAGSDELGLPPLKLARKDKRTRRRR---EADAGRREEEVEFDVFGVPRPRSTPRCLRPGYKGEVTAAMLRQELEASESTAARLGITMARKAEAWKTEAQEGTAAAAASCAXXXXXXXXXXXXXXXXXXHEALLESAHDRMREAMNIMYLRTIRRGWGAWAELTRRQRSIEAAGRVARLVGAAAIGFAVLEPFLRRRTRTWLRRWAGAMRAERVLEVQAAAVELQRTVRGFLGKRRADKRWRDIAXXXXXXXXXXXXXXXXGARRARLMEERRAVLTIEQKYREFVWQRDAVKLLALKRKERAATKLQAAWNGLVYGRRPVRRLREQRLREVSAVMLQRLWRGVVARGRADVLMEAKCRREAAVKIQAVARGCGARKVYRPIILRERAAATMSRFWRCAKARRVARQKRWENALAARLNPLVRGFLARSATKRLLEARARENRAMVVVCVAAQKIFRGKKGRLKARRELLRRCAAVELQRIVRGRAVRRLSRIEEGRPRSQAASWMAAMAVQRIWRGLKGRRKLGQRAAEHRLWNAAFTIQSAHRRQCMRRRRQERALKRGMEAA--------NAAAAFSQGLGHAVSVAG----ATAAXXXXXXXXXXGGRLSFADTTEEAG---QRAAGDG---AGEGARSID----RLEGAAGAASPRGAADTGSSATAAHGGTAGGARVDDPPAVEVKVAPTPEYEDMGDVAIAAV-------LQSAKKSSTXXXXXXXXXXXXXXXXXXXXXPVL----VPAKPADPPPPVVEEEMLEYYEAKLRYLAAQEKAHGASAARIQAMFRAYEARQRAATLGAERDKAERRXXXXXXXXXXXXXXXXXXXXXXXXXXXRAEILEASRREQGLLTIQCAVRCYLGKCRLQGLRKAEREKQEMLFRMAARIQALVRGIQTRGIWRKFFTSRALLQRERQRTGAQQIQSFWRSKLARTEAERRRSVRDAALLAEQLERHLKGLLEATMEAERRHAYAIRLQCWWRGILAVKVKARKQLTLMETPPEDVGE-EKEKAAXXXXXXXXAIKARRFYNANYALLYRERERRKCCTECQSEYATRKCDTCTDKFCEGCWARIHSTGARRFHDWLPFAPATYDT-SRPQDATAAPSITDSQYYYDT----STGQQGTGGGE------LWDVNQQSAELDPYYQPGYESYDYPGSEYYYDQRGWEQEGGN--QQVSAVSVQGWSPETNKQWYDPDQPPSTGSEYGYDGAMSYDGAAAITPSSSSDYYPAWTPETP---DTAADNNSNAAGTTEKSWEGEGDGEWTSAAAEYYGYDSAGNGVDQ--AAGGAWAGAGGVAGGWDEGWATPQPADTANGDEDSSVFLASTGGETSKDSGGGXXXXXXAPPSGSSGSRPWSVNEYGQRVAGDWVEYWDDAAQAAYFYNTASGE 2193
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Match: A0A6H5KC93_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC93_9PHAE) HSP 1 Score: 900 bits (2326), Expect = 9.950e-284 Identity = 822/2309 (35.60%), Postives = 1086/2309 (47.03%), Query Frame = 1
Query: 1 LAPNLGLGGIPTQSLIEFRGGGSMLSREILGEMLAASDVGVLNSRDNVGGRYGGXXXXXXRQQRASLDARK--RGGDRWPIEDDMRVPLRCRQKDTLSPLRKDSPVRSARQTWSDAASWAERSIS--LENNASGYGDQ--LRCEDPSSRSKPGNDDIGPS----APSVRRKASIFVSPSKRPRPTAKLFDHDHNPRLLRALNDKTTVTGIAVGSGDKVLRVNGEGRPIDGLRVWRRLVYDRATELEDHIFQSQVDAPRRGRLGKLNLNRMQ-NASMPRREEQA-RDMETIFRGRGEVPDKRITSTREKYCPNPDGVGG---FRPRNKEASRSIHGRWSLKTEQGRPFDSLVGNGHMSW-------TQTSWGVATCNPPLSPRLTPTVSLRRYLSSLRPFSVDSAQAMLGQPETTRAIDSASTSEFSSCPTTMEKSGF-----MWPVLFVMGHSNPSA-RHPLSVHALPLFDDDTIALIAQASGEPKGTVRTMARVLSRFDFPLLQAMVKRLCRAHTA---------GGAGTPSSDAGVRQGEKDSYSAAQSWVRSTKESLIGKSDSVGSRQWTKDEANEPLILSEKLATRAITSGFLGCIFGNDAVRDILNASRPFVAYDLTWRKQGLDSPSPLPLLLREDTGKGREEWVPRRINRYLSDPAVKAGVPLEVDQASKSVSEKNSTSFSKQRSGESLVVMLEA---SDHAYSCLAPDL-----PCDDGPHSALLPTAHASDMASSSHKRK-----EPESEKEEGVFLDMFVRAVAVKFRVHSLAILHHGGDGDTHASCLQSRGSLELAIEEGIFV--SRMDDKRALREEFGAERRRKTSIGSDEFGLLPLKLLKSDARMRPRRALARAFTFPAREDEEADMVGVYCPRSTPRCLRPGFKGDVTTGMLRHELEMADAAEARLSIRITRKAKAWRIKTHYAGPASAATVTTAKAQ-GRAEFAIASAPTKDDILNVTKERARKAVETIYISVIRRVWKTWVKLTGYRRSLEAAEIFVRLVGAIALGSGVLEPLLRRRKRVWVRRWASAMRAERVLEVQAAAVELERVVRGFLGRARARKRLRNAXXXXXXXXXXXXXXXXXXXRRAKFLRELQAARTVERKRLELVWRRNAIKILEHKRKERAAAKAQSAWRALVLGRRPARLLQRAXXXXXSSVMVQRLWRGSMARGKVDVLLELKRTREAAIRVQTVARGRGIRRIYTPLILRERAASRLCRSWRCATARKRLWLERSRLCLARLANPLSRGFLSRAAVRRIRDERCKKKRAIISACLATQKIFRGKRGRVKARRELLRRCAAVKLQSLAKGMIARRVSRAKSARQRGQISTWTSAVAVQRVWRGITERRRFGQK---RLKQRLWNAAFTIQSAYRRYRAHCRRQRCARDRARELAAVDKSG----RMTAAAASIDGDERQTTGAGSETHVSSPSPIDLRAHFRAGGDDLPDVLQQ-GGLGTEAWSGDGNERICSGEETVNAQGRKTEGVAGSGESTIGVKSPAGVHGESGIISTVSEVGLATLNQKASALEEMGDVALATISAQQSEATETSPTSSRMPLSIPTSTLLEKNVHRPEEGKFLSEDRTSAEVLRPQPLARQKERMAYYEAKSRYLAAQEAAHGASAAKIQA--------------IFHGFLARRVTKSMLENRREAERYHLERVRASILIQAGMRGRVARLRVARKRAVIFEAARREEGLLTIQCALRCHMAKCRLRHLREVEKTKLER------------------------LDRMAVRI---QARVRGWKTRDVWRKFFKSRALFERERQRQGAQQIQSSWKSKLARSEAERRRSLRDAALLAKELECHLKRILEPTMEREIKHAYAVRIQCWWRRILVMKLKARNIVALEELQKR--GEKDGEKSALVVQCHWRGYRARCFYHDNYTSLFRERERKKYCTECQWEYATRNCGTCLDKFCESCWAKMHSK-------------------GARRFHHWEHFTPVSYEQNSSDQHVSAGTSGLDSNANYDNVPDWSTQAEDWNAVRHVQRQIIGDIGAADQQVDAYNQV-YDHVPLYPENKIVDGKKADDVYGNWMQQGLTESDQIWQAST----------PQVGA---YEGGASY--------GLRGGSFPPWSPEATAFNKLSTESTNGWSAGVQGEWMQATPHQWAESAPETAGYYNGHKNVLEVPATDQDFISDGKGADTIIDLEACATPGTVANEAERLVSITTGSGGGDSNSNGGWNDGGLSV---SQTAGEPWCYNEYGQRVCGDWVEYLDESAQATYFYNAATGE 6483
L LGL G+P +SLIEF GGGSMLSRE+LGEMLA D GVLN+R + G R ++ + AR +G D +E+ ++ L C Q + L + S +S +RS + +E+ Y DQ L E + D G + + +A V+ S R K +DHDHNP++LR+L D T +TGIA G+G L+ EGR ++ LR+ RL RATELED IFQSQ +P R LG+L L R N +P E + + + G + + C +PDG GG RPR++ + R + P L G+ + S V TC+PP SP LTPT SLRRYLSSLRPFS +SA+A G D A+ + P T F WPVLFVMG S P RHPLSVHALPLFDD+ +AL+A+A+GEP VR M ++LSRFD LLQ+ VKRLC H + GG G +G R A ++W RS L G S + + + EPL++SE A RA+T+GFLG +FG DAVRDI+ ASRP V +D T +G ++ +P PL G+ + + R P+ K G E D +S+ ++ + + + + SL + D S + P PC D + +D A + + E S E+GV + VRA +FRVHSLA+ HH G T + GI++ S D +E G RR S GSDE GL PLKL + D R R RR A E+ E D+ GV PRSTPRCLRPG+KG+VT MLR ELE +++ ARL I + RKA+AW+ + A+AA R A + +L ++R R+A+ +Y+ IRR W W +LT +RS+EAA RLVGA A+G VLEPLLRRR R W+RRWA AMRAERVLEVQAAAVEL+R VRGFLG+ RA KR R+ XXXXXXXXXXXXXXXXXX + + E +A RT+E+K E VW+R+A+K+L KRKERAA K Q+AW LV GRRP R L+ S+VM+QRLWRG +ARG+ DVL+E K +EAA+++Q VARGRG R++Y +ILRERAA+ + R WRCA AR+ +R LA NPL RGFL+R A +R+ +E + L CA + LQ + +G RR+SR + R R Q ++W +A AVQR+WRG+ RR GQ+ R ++R + +A A+ + G + A A+I G + + A RA GDD D + L A G G G I VK + E E+MGDVA+A + QS ++P P+ + A+ P ++E + YYEAK RYLAAQE AHGASAA+IQA +F + AR+ ++ R + E I +AARRE+GLLTIQ K E E + LDR + +A VRG +TR+VWRKFF SR L +RERQR GAQQIQS W+ HLK +LE TME E +HAYA+R+QCWWR IL +K+ AR + L E GE + EK+ALV+Q HWR +AR FY+ NY L+RERER+K CTECQ EYATR C TC DKFCE CW ++HS A W F P +Y S Q +A S D YD ST + + D+ ++D Y Q YD D + + GN QQ S Q W T P G+ Y+G SY L +P W+PE + + ++N V+ W +W +A E GY + V + A + G A + A P AN E +GG S +GG + PW NEYGQRV GDWVEY D++AQA YFYN A+GE
Sbjct: 32 LVQELGLHGVPAKSLIEFEGGGSMLSREVLGEMLAVHDHGVLNARVGATEKSHGGRSKRARGRQGASSARSPGKGSDGRAVENRIQTRLLC-QAEAPKCLGESSSSQSRVFAKLVPRKSTKRSHNNGVESRQRDYHDQQALLAEQRREKQTAFIDGDGMNHRRATATAHFEAQQTVAGSSNKRRRHKRYDHDHNPKVLRSLVDDTIITGIA-GAG--ALKAE-EGRQMEDLRLQLRLACHRATELEDQIFQSQTGSPHRELLGELQLARAAGNTGIPLLERPSWKKINFDLDPTGNAAKAPRNTDVLERCRSPDGAGGRSPLRPRHRVSPRKTRRTPLDVSFSTDPPQHLAGSSTSATDIIPRRQANVSDMVTTCHPPQSPPLTPTSSLRRYLSSLRPFSANSARAAWG------LADPANGGNPLARPVTDFTHPFGNGQPRWPVLFVMGGSKPPPPRHPLSVHALPLFDDEVVALLARAAGEPAEKVRAMVQLLSRFDVRLLQSAVKRLCCKHASSRTQAVAARGGRGRHLQRSGPRG------PATEAWGRSPMPPLPGPSAAADAAH-SSTSVEEPLLMSEAAAGRALTAGFLGGVFGEDAVRDIVVASRPVVVFDSTESAKG-EALTP-PLQGEAIGGERQNDRGDRSEGGASRAPSWKIGKNAEQDSSSRGGEDEAAATAANEDLASSLPSVEYRRTWEDRNGSSVNPRAQGDSPPCTDDGSLLVNSPRRVADTALGKRQLEVSELAEHNSNPEQGVLVAQLVRAATARFRVHSLAVQHHEHGGVTSTN--------RRDFGRGIYIGGSGAIDWTEGGQEPGQRLRRPASAGSDELGLPPLKLARKDKRTRRRR---EADAGRREEEVEFDVFGVPRPRSTPRCLRPGYKGEVTAAMLRQELEASESTAARLGITMARKAEAWKTEAQEGIAAAAAXXXXXXXXXNRXXLAXXXXXAHEALLESAQDRMREAMNIMYLKTIRRGWDAWAELTRRQRSIEAAGRVARLVGAAAIGFAVLEPLLRRRTRTWLRRWAGAMRAERVLEVQAAAVELQRTVRGFLGKRRADKRRRDIAXXXXXXXXXXXXXXXXXXXXXRMMEERRAVRTIEQKYREFVWQRDAVKLLALKRKERAATKLQAAWSGLVYGRRPVRRLRERRLREVSAVMLQRLWRGVVARGRADVLMEAKCRQEAAVKIQAVARGRGARKVYCRIILRERAAATMSRFWRCAKARRVARQKRWESALAARLNPLVRGFLARRATKRLLEE------------------------------QALDNCAMIVLQRIVRGRAVRRLSRMEEGRPRNQAASWMAATAVQRMWRGLKGRRMLGQRMRRRRQERTLKRGIEVANA--------------------AASFSQGGGHAVSVAGATAAIXXXXXXXXXGGRRSFADTTG----EAGQRAAGDDAGDGARSIDRLXXXXXXXXXXXXXXXXXXXXAAHGGTVGGPRVDGPPAIEVK-----------VGATPEY------------EDMGDVAIAAV--LQSAGKSSAP---------PSXXXXXXXXXXXXXXAVVEPVLVPAKPADPPXXVVEEEMLQYYEAKLRYLAAQEKAHGASAARIQASATVDTVVERDQEAMFRAYEARQRAATLRAERDKVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEILKAARREQGLLTIQAP------KSGFEEDGEGEAGDVVSHGGPSTGGWAGLSCTPPSLPSPSCLDRRVFGVCFGKALVRGIQTRNVWRKFFTSRVLLQRERQRTGAQQIQSFWR--------------------------HLKGLLEATMEAERRHAYAIRLQCWWRGILAVKVMARKQLTLIETPPEDVGE-EKEKAALVLQXHWRAIKARRFYNANYALLYRERERRKCCTECQSEYATRKCDTCTDKFCEGCWTRIHSTLSSVCKEVSTKCRSPLAGCSAPFMXDWLPFAPAAYNT-SRPQDAAAAPSTTDRQYYYDA----STGQQGAGGGE------LWDVNQQSAELDLYYQPGYDSYDYSGSKYYYDQRGWEQEGGN--QQTSAVSVQGWSPETNQQWYYPDQPPSTGSEYGYDGAMSYDGAAAITPSLSSDYYPAWTPETP--DTAADNNSNAAGTTVK-SWEGEGDGEWTSAAAEYYGYDSAGSGVDQ--AAGGAWAGGGGVAGGWNEGWATPQPADTANGDEDSSVFLASTGGETSKDSGGGXXXXXXAPPSGSSGSRPWSVNEYGQRVAGDWVEYWDDAAQAAYFYNTASGE 2170
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Match: A0A7S3GXG6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXG6_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 9.840e-8 Identity = 99/362 (27.35%), Postives = 155/362 (42.82%), Query Frame = 1
Query: 4654 YYEAKSRYLAAQEAAHGASAAKIQAIFHGFLARRVTKSMLENRREAERYHLERVRASILIQAGMRGRV----ARLRVAR------KRAVIFEAA--------RREEGLLTIQCALRCHMAKCRLRHLREVEKTKLERLD------------RMAVRIQARVRGWKTRDVW----RKFFKSRALFERERQRQGAQQIQSSWKSKLARSEAERRRSLR-DAALLAKELECHLKRILEPTMEREIKHAYAVRIQCWWRRILVMKLKARNIVALEELQKRGEKD----GEKSALVVQCHWRGYRARCFYHDNYTSLFRERERKKYCTECQWEYATRNCGTCLDKFCESCWAKMHSKGARRFHHWEH 5622
YY K Y +Q H A KIQ + LARR YH R A + IQ + G+ ARL++A+ KR + A RR+ + L+ + K L L + K K + + + +IQA +RG + +D R+ + R E++++ A +IQ + + A +A+ RR L+ D +E E L+ LE E + +R Q R +L KA I +E+ + + EK+ +A +Q RG R + N +L R ++ + C EC+ A R C C DK+C SC+ ++H+KG RR H WEH
Sbjct: 777 YYRLKDEYYRSQNMYHRAKVVKIQCLVRCHLARRRV------------YHQRRHLAVLRIQKFLLGKQVIQEARLKLAKMKRELAKRFALITMANLRIAMFLRRKRVERLAKKRLQVKIIKWFLSELVLINKLKQAKFNFRNMKSVKIIENKAVTKIQAVIRGKQAKDYVEKSRRRLVRQRNARRVEKRQKMALKIQCRVRQRQAAHKAQTRRQLKADEERERREFE-ELELSLEGLHEDFMTELLVIRAQKGVRSMLA---KAEFIKKVEQYKAQREKELLDIKRHAARRMQALIRGVLGRMKFKKNLPALKRAQKVRGICCECESNVAVRRCRQCKDKYCASCYDRIHAKGTRRQHGWEH 1122
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Match: A0A7S3M3I4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3I4_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 8.140e-6 Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 5398 SALVVQCHWRGYRARCFYHDNYTSLFRERERKKYCTECQWEYATRNCGTCLDKFCESCWAKMHSKGARRFHHWEH 5622
+A +Q RG R + N +L R ++ + C EC+ A R C C DK+C SC+ ++H+KG RR H WEH
Sbjct: 36 AARRMQALIRGVLGRMKFKKNLPALKRAQKVRGICCECESNVAVRRCRQCKDKYCASCYDRIHAKGTRRQHGWEH 110
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Match: A0A835Z2L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2L4_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.040e-5 Identity = 59/184 (32.07%), Postives = 73/184 (39.67%), Query Frame = 1
Query: 2497 PRSTPRCLRPGFKGDVTTGMLRHELEMADAAEARLSIRITRKAKAWRIKTHYAGPASAATVTTAKAQGRAEFAIASAPTKDDILNVTKERARKAVETIYISVIRRVWKTWVKLTGYRRSLEAAEIFVRLVGAIALGSGVLEPLLRRRKRVWVRRWASAMRAERVLEVQAAAVELERVVRGFLGR 3048
PRSTPR LR GFKG ++ LR EL+ A A RK W + + + ++ ER ET + R W T Y A F R GA AL VL PL RRR R ++ R+LEV AA +E +RVVRGFL R
Sbjct: 437 PRSTPRVLRTGFKGHLSIAELRAELQQAQRAAHDNEAAARRKVGVW--------SKDLSQRRXXXXXXXXXXXXXAVDARRALIGRGLERLTALAETAEARHVARACARWRAHTMYLALRPTARAFSRAAGAAALAWCVLAPLHRRRLRRALQCXXXXXXXXRLLEVTAATIEAQRVVRGFLAR 612 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig995.17280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig995.17280.1 >prot_H-elongata_contig995.17280.1 ID=prot_H-elongata_contig995.17280.1|Name=mRNA_H-elongata_contig995.17280.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=2161bp LAPNLGLGGIPTQSLIEFRGGGSMLSREILGEMLAASDVGVLNSRDNVGGback to top mRNA from alignment at H-elongata_contig995:1163..12785+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig995.17280.1 ID=mRNA_H-elongata_contig995.17280.1|Name=mRNA_H-elongata_contig995.17280.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=11623bp|location=Sequence derived from alignment at H-elongata_contig995:1163..12785+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig995:1163..12785+ >mRNA_H-elongata_contig995.17280.1 ID=mRNA_H-elongata_contig995.17280.1|Name=mRNA_H-elongata_contig995.17280.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=12966bp|location=Sequence derived from alignment at H-elongata_contig995:1163..12785+ (Himanthalia elongata Himel1 dioecious)back to top |