prot_H-elongata_contig99363.17273.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99363.17273.1
Unique Nameprot_H-elongata_contig99363.17273.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length145
Homology
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.530e-53
Identity = 88/145 (60.69%), Postives = 110/145 (75.86%), Query Frame = 0
Query:    1 QVKNGGALSISKECAVTFMGTVKFINNSVLIKQLPPVTCGEGCTTIGRGLSYVAKKGGAVHNKGDLTFQGDASFLGCYSQTDDSVETSRGGAISNNAPGVIHFMGDLTMESNEAEGFFEGQGGAIYNRGDIVVDGDVVFYDNDAS 145
            QVKNGG LS+++    TFMGT +F +NSV +KQ+ PV+CG+GCT IGRGLSY+ KKGGA+HNKG LTF+GDA+F      T+DSVE  + GAISN   G I F   LTM+ NEA+GFFEG GGAIYNRG+IVV+G+ +F  N +S
Sbjct:   98 QVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSS 242          
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 5.050e-52
Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 0
Query:    1 QVKNGGALSISKECAVTFMGTVKFINNSVLIKQLPPVTCGEGCTTIGRGLSYVAKKGGAVHNKGDLTFQGDASFLGCYSQTDDSVETSRGGAISNNAPGVIHFMGDLTMESNEAEGFFEGQGGAIYNRGDIVVDGDVVFYDNDAS 145
            QVKNGG LS+++    TFMGT +F +NSV +KQL  V+CG+GC   GRGLSYV KKGGA+HNKG LTF+GDA+F      T+DSVE  + GAISN   G I F   LTM+ NEAEGFFEG GGAIYNRG+I+VDG+ +F  N AS
Sbjct:   98 QVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTAS 242          
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 5.660e-37
Identity = 67/127 (52.76%), Postives = 87/127 (68.50%), Query Frame = 0
Query:   19 MGTVKFINNSVLIKQLPPVTCGEGCTTIGRGLSYVAKKGGAVHNKGDLTFQGDASFLGCYSQTDDSVETSRGGAISNNAPGVIHFMGDLTMESNEAEGFFEGQGGAIYNRGDIVVDGDVVFYDNDAS 145
            MGT +F NNSV +KQ   ++CG+GCT   RGL+Y+ KKGGA+HNKG LTF GDA+F    + T+ S +   GGAISN   G I F   LTM+ N+A+  F G GGAIYNRG+I+V+G  +F  N A+
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAA 127          
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.200e-22
Identity = 62/143 (43.36%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    3 KNGGALSISKECAVTFMGTVKFINNSVLIKQLPPVTCGEGCTTIGRGLSYVAKKGGAVHNKGDLTFQGDASFLGCYSQTDDSVE--TSRGGAISNNAPGVIHFMGDLTMESNEAEGFFEG-QGGAIYNRGDIVVDGDVVFYDN 142
            KNGG L +       F GT +F +NS++   +   T  E           + +KGGA+H KG LTF+ DA+F G     +D +   +  GGAIS +  G I+FMG LTM  NEA+ +F G QGGAI+NRGDIVVDG+  F  N
Sbjct:  102 KNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEE-----------ILRKGGAIHTKGSLTFEKDATFSG---NLNDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGN 230          
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 1.850e-6
Identity = 34/89 (38.20%), Postives = 41/89 (46.07%), Query Frame = 0
Query:   57 GGAVHNKGDLTFQGDASFLGCYSQTDDSVETSRGGAISNNAPGVIHFMGDLTMESNEAEGFFEGQGGAIYNRGDIVVDGDVVFYDNDAS 145
            GG V   G  T  GDA+F GC S          GGAI  +  G + F   +T+        F GQGG IYN G++ V G   F D  AS
Sbjct:   23 GGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISAS 111          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99363.17273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI4.530e-5360.69Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI5.050e-5261.38Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI5.660e-3752.76Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE1.200e-2243.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG63_ECTSI1.850e-638.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 107..127
e-value: 0.052
score: 14.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99363contigH-elongata_contig99363:167..1602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99363.17273.1mRNA_H-elongata_contig99363.17273.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99363 167..1602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99363.17273.1 ID=prot_H-elongata_contig99363.17273.1|Name=mRNA_H-elongata_contig99363.17273.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
QVKNGGALSISKECAVTFMGTVKFINNSVLIKQLPPVTCGEGCTTIGRGL
SYVAKKGGAVHNKGDLTFQGDASFLGCYSQTDDSVETSRGGAISNNAPGV
IHFMGDLTMESNEAEGFFEGQGGAIYNRGDIVVDGDVVFYDNDAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat