prot_H-elongata_contig99113.17252.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig99113.17252.1
Unique Nameprot_H-elongata_contig99113.17252.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length213
Homology
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: D7FPW9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPW9_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 8.050e-119
Identity = 177/213 (83.10%), Postives = 191/213 (89.67%), Query Frame = 0
Query:    1 QVRVLGPNTGGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDVTSIAQGQPSSYPRETGRSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAVYVGHLPEFEWIAQDISDK-PRGRQLALVGQDLITHTRVVLSCRSKRLYFAPLEANDVWAGQMV 212
            QV+VLGPNTGGVLGLDFLNRYD+DLN ETNEAR YVAGAVDQGL+DTS LEGL CG LPGGKL IKMELNGGG FTGVLDLAS++T GNWLAARDLDVTS+A GQ SSYP+ETGRS PLM A FDT+QLGHVLL S VDAKTA EGRLAVYVGHLP F+ IA+DIS + PR RQLALVGQDLI HTR+VLSCRSKRLYFAPLEAND+WAGQ+V
Sbjct:  211 QVKVLGPNTGGVLGLDFLNRYDLDLNFETNEARFYVAGAVDQGLVDTSLLEGLKCGSLPGGKLAIKMELNGGGPFTGVLDLASSTTVGNWLAARDLDVTSMASGQSSSYPQETGRSLPLMCAQFDTIQLGHVLLASVVDAKTASEGRLAVYVGHLPVFDSIARDISIREPRSRQLALVGQDLIGHTRIVLSCRSKRLYFAPLEANDIWAGQVV 423          
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: A0A835ZPQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPQ0_9STRA)

HSP 1 Score: 240 bits (613), Expect = 3.030e-75
Identity = 115/202 (56.93%), Postives = 152/202 (75.25%), Query Frame = 0
Query:   11 GVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDVTSIAQGQPSSYPRETGRSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAVYVGHLPEFEWIAQDI-SDKPRGRQLALVGQDLITHTRVVLSCRSKRLYFAPLEANDVWAGQM 211
            GVL L FL  YD+D+ +   +  +Y+ GAVD G+++T GLE + C  LPGGKLG+KMELNGGG FTGVLD+ SNS+ GNW AARDLDV+ +     S YP+ETGR RPL +A FDTVQ+GHVLL++  DA+T  +GRL++YVG+LPEF+ + +DI   +   RQLALVG DL+ +TR+V+S +SKR++F   E NDVWAGQ+
Sbjct:  168 GVLALAFLANYDLDIQMNAGKVDVYLQGAVDSGMLNTEGLEEVRCNTLPGGKLGVKMELNGGGVFTGVLDMGSNSSVGNWAAARDLDVSELFLQDASRYPQETGRLRPLFKACFDTVQVGHVLLSNVPDAQTDAQGRLSMYVGYLPEFDLLQEDIRGTRDPARQLALVGLDLLGNTRIVISVKSKRIFFKAKELNDVWAGQV 369          
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: A0A7R9TXH2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TXH2_MICPS)

HSP 1 Score: 78.2 bits (191), Expect = 1.760e-13
Identity = 56/203 (27.59%), Postives = 92/203 (45.32%), Query Frame = 0
Query:   10 GGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDVTSIAQGQPSSYPRETG---RSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAVYVGHLPEFEWIAQDISDKPRGRQLALVGQDLITHTRVVLSCRSKRLYFAPLEA-NDVWA 208
            GG+LGL+FL++++ + +      R +  G+V  G +D S L  +  G  P G   ++  LNGG  F G++D+ S  +  NW+AA    V+  + G   S  +  G   R+  +  A F    LG        +     E +    VG LP F  +  + S          VG D+I   R +L  ++ R+Y  P +A   +W+
Sbjct:  153 GGLLGLEFLSKFECEFDFTDKALRFHPPGSVACGAVDASDLVAIPLGTHPTGLRTVQCALNGGAPFPGIVDMGSFFSVVNWIAANSGGVSPDSPGVAESAMKAVGIDGRAMNMATAAFTLDVLG----AEGEETSLKSEYKGQCCVGDLPAFASLGAETS------ACMSVGLDVIGRGRTILDVKNDRVYLTPGDAPGGMWS 345          
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: C1FGK3_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1FGK3_MICCC)

HSP 1 Score: 68.6 bits (166), Expect = 5.520e-10
Identity = 55/205 (26.83%), Postives = 86/205 (41.95%), Query Frame = 0
Query:   10 GGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDV---TSIAQGQPSSYPRETGRSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAVYVGHLPEFEWIAQDISDKPRGRQLALVGQDLITHTRVVLSCRSKRLYFAPLEA-NDVWAGQ 210
            GG+LGLDFL+R++++L+      R +  G+V  G +D   L  +     P G   +   LNG   F G+LD+ S  +  NW+AA    V     + +    +     GR   +  A FD    G          ++  +G   V  G LP F  +    S          VG D++   R VLS  +  +Y  P +A   +W  +
Sbjct:  225 GGMLGLDFLSRFELELDFADKAMRFHPIGSVATGALDVDSLVHIPLARHPTGLRTVSCRLNGCERFPGILDMGSFFSVCNWMAAARAGVGPDNPVVKNAAMTAVGVDGRPMAMSTAPFDLEVCGDGTDEGGQGLRSEYKGECCV--GDLPAFASLGATASP------FMTVGLDVLGRGRSVLSVGADAVYLTPGDAPGGMWDSE 421          
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: A0A1Y5IC47_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IC47_OSTTA)

HSP 1 Score: 68.2 bits (165), Expect = 7.230e-10
Identity = 53/201 (26.37%), Postives = 88/201 (43.78%), Query Frame = 0
Query:    5 LGPNTGGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDL----DVTSIAQG--QPSSYPRETGRSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAVYVGHLPEFEWIAQDISDKPRGRQLALVGQDLITHTRVVLSCRSKRLYFA 199
            L P  GG+LGLDFL++++I+ N   +  + +  G++  G +DT  L  +   + P G   +K  LN    F  ++D+ S  +  NW+A+       D   + +G  Q S      G S  +  A FD   +G      A D  +   G   V  G LP F  +   +S       +  +G D+I   R+V +     +Y +
Sbjct:  215 LPPQIGGLLGLDFLSKFEIEFNFTDSALKFWPKGSIANGAVDTDDLVKIPLHLHPVGLRTVKCSLNNSAPFDAIVDMGSFFSVANWMASTTAGIGPDSPEVKRGGLQVSGVD---GGSMQMAMAPFDLRVIGE-----AEDLSSTYRGMCCV--GDLPAFNALGASVSP------MMALGLDVIGRGRMVFNASDNCMYLS 399          
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Match: A0A383VIY4_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VIY4_TETOB)

HSP 1 Score: 65.5 bits (158), Expect = 7.690e-9
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0
Query:    7 PNTGGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGLEGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDVTSIAQ 103
            P  GG+LG+  L  +D+D+++  N+  L+ AG V+ GL D +G+  + C     G + + + L G   FTG+LDL++ ++  NW AA  L +T   Q
Sbjct:  403 PAVGGLLGVQVLRCFDLDVDVAGNQLALHPAGHVELGLCDVAGMTPVPCRFTKSGAIVLPVSLAGSAPFTGLLDLSAATSILNWEAAALLGMTCTEQ 499          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99113.17252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FPW9_ECTSI8.050e-11983.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZPQ0_9STRA3.030e-7556.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9TXH2_MICPS1.760e-1327.59Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
C1FGK3_MICCC5.520e-1026.83Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A1Y5IC47_OSTTA7.230e-1026.37Uncharacterized protein n=2 Tax=Ostreococcus tauri... [more]
A0A383VIY4_TETOB7.690e-935.05Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig99113contigH-elongata_contig99113:945..2300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig99113.17252.1mRNA_H-elongata_contig99113.17252.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig99113 945..2300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig99113.17252.1 ID=prot_H-elongata_contig99113.17252.1|Name=mRNA_H-elongata_contig99113.17252.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp
QVRVLGPNTGGVLGLDFLNRYDIDLNLETNEARLYVAGAVDQGLIDTSGL
EGLSCGVLPGGKLGIKMELNGGGAFTGVLDLASNSTAGNWLAARDLDVTS
IAQGQPSSYPRETGRSRPLMRALFDTVQLGHVLLTSAVDAKTAREGRLAV
YVGHLPEFEWIAQDISDKPRGRQLALVGQDLITHTRVVLSCRSKRLYFAP
LEANDVWAGQMV*
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