mRNA_H-elongata_contig12262.1724.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig12262.1724.1 vs. uniprot
Match: D8LEX2_ECTSI (ARID/BRIGHT DNA binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX2_ECTSI) HSP 1 Score: 65.9 bits (159), Expect = 1.770e-8 Identity = 39/60 (65.00%), Postives = 45/60 (75.00%), Query Frame = 1
Query: 451 RDLPRALRSTSSPSEVVAAVNTLTLETF-EATEELVLEDIPGLFDAIFDLMDSLNPAVTQ 627
+ L RAL S S +EV AVNTLTLET+ A EELVL+ +PGL DAIFDLMD LNPA+ Q
Sbjct: 136 QQLARALGS-GSATEVCEAVNTLTLETYGTAEEELVLDHVPGLLDAIFDLMDKLNPAIAQ 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig12262.1724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig12262.1724.1 >prot_H-elongata_contig12262.1724.1 ID=prot_H-elongata_contig12262.1724.1|Name=mRNA_H-elongata_contig12262.1724.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=562bp MEVQQLQRQRQEEQQRKEDEQRLRKKEEEEHDRRRKLQEQQQHLVKQQQQback to top mRNA from alignment at H-elongata_contig12262:198..7529+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig12262.1724.1 ID=mRNA_H-elongata_contig12262.1724.1|Name=mRNA_H-elongata_contig12262.1724.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7332bp|location=Sequence derived from alignment at H-elongata_contig12262:198..7529+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig12262:198..7529+ >mRNA_H-elongata_contig12262.1724.1 ID=mRNA_H-elongata_contig12262.1724.1|Name=mRNA_H-elongata_contig12262.1724.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3372bp|location=Sequence derived from alignment at H-elongata_contig12262:198..7529+ (Himanthalia elongata Himel1 dioecious)back to top |