mRNA_H-elongata_contig9888.17233.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: D8LRB7_ECTSI (Similar to calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB7_ECTSI) HSP 1 Score: 110 bits (276), Expect = 5.120e-28 Identity = 63/129 (48.84%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 4 DVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTYKVRAA-----IRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYMMAA 375
DV+ DG VTK EL WSLGQ+P EEE D +FREYD + G LDF EFR L+T RLTYK A +V TG GLT++EL EIFG D GSG+V++ EF+DYMM A
Sbjct: 75 DVNGDGSVTKSELKDALWSLGQNPTEEETDHIFREYDADKTGTLDFNEFRLLMTARLTYKNTRAEFXXXXXXXXXXXXXXXXXXXXXXXMVATGFGLTNQELKEIFGFFDSDGSGKVDMAEFLDYMMDA 203
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A6H5JR81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR81_9PHAE) HSP 1 Score: 107 bits (266), Expect = 1.510e-26 Identity = 61/132 (46.21%), Postives = 74/132 (56.06%), Query Frame = 1
Query: 4 DVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTYK--------VRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYMMAA 375
DV+ DG VTK EL WSLGQ+P EEE D +FREYD + G LDF EF+ L+T RLTYK V +G GLT+REL EIFG D+ GSG+V++ EF+DYMM A
Sbjct: 69 DVNGDGSVTKSELKDALWSLGQNPTEEETDHIFREYDADKTGTLDFNEFKLLMTARLTYKGDQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASGFGLTNRELKEIFGFFDRDGSGKVDMAEFLDYMMDA 200
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A0B7KDY7_BIOOC (Uncharacterized protein n=2 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7KDY7_BIOOC) HSP 1 Score: 84.0 bits (206), Expect = 2.340e-16 Identity = 42/127 (33.07%), Postives = 76/127 (59.84%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNR-----LTYKVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYM 366
FD D+DG +T EL +V +LGQ+P E E+ A+ E D+++NGAL+F +F RL++++ L ++ +DR DG + + L+ + V +G+++ +L E+ A D+ G ++ +EF+ M
Sbjct: 475 FDQDKDGQITAAELSEVMRALGQNPTESELQAIIDEADLDNNGALEFSDFVRLMSDKVKPISLDEELWQVFVMLDRNGDGRVSKEELREAMAVLANGVSEADLNEMLQAADEDDDGHISYEEFVKVM 601
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A3M7NPM1_9EURO (Uncharacterized protein (Fragment) n=4 Tax=unclassified Chaetothyriales TaxID=316340 RepID=A0A3M7NPM1_9EURO) HSP 1 Score: 79.7 bits (195), Expect = 3.210e-16 Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLT-----YKVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYM 366
FD D G +T EL V SLGQ+P E E+ + E DV+ +GA+DF+EF ++++ L + RAA D+ G + L++++ G LTD E+ E+ DK G ++ +EF+ +
Sbjct: 41 FDKDNSGTITASELGDVMRSLGQNPSETELRDMINEVDVDQSGAIDFDEFLKMMSTTLKPIDVDQETRAAFAVFDKDGSGTISADELRQVMKSLGEDLTDAEIDEMIREADKDRDGTIDYEEFVQLL 167
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A0D1WEH7_9EURO (Uncharacterized protein n=1 Tax=Exophiala sideris TaxID=1016849 RepID=A0A0D1WEH7_9EURO) HSP 1 Score: 76.3 bits (186), Expect = 7.810e-15 Identity = 39/127 (30.71%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRL-----TYKVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYM 366
FD D G +T EL + SLGQ P + E+ + E DV+++GA+DF+EF ++++ + + RAA D+ G + L++++ G LTD E+ E+ DK +G ++ +EF+ +
Sbjct: 46 FDKDESGTITAQELGDIMRSLGQTPTDSELQDMINEVDVDNSGAIDFDEFLKMMSTTVRAQDFAQETRAAFDVFDKDGSGTISADELRQVMKSLGENLTDAEIEEMIREADKDRNGTIDYEEFVQLL 172
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A7I8VVI0_9ANNE (DgyrCDS8812 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VVI0_9ANNE) HSP 1 Score: 67.8 bits (164), Expect = 1.040e-10 Identity = 39/132 (29.55%), Postives = 67/132 (50.76%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTY-------------KVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFI 357
FD D DG + EL QVF LG E+I + ++ D++ NG++DFEEF+R++ R ++RAA + D+ +G +D K L+ + G L++ +L + + GR+ +EF+
Sbjct: 196 FDKDADGVINTQELLQVFKQLGMDTSTEQIQRMMKKVDLDGNGSIDFEEFKRMMRKRKGLAAITRQERRAEEEEMRAAFKVFDKDKNGYIDDKELRVTMQELGMKLSENDLVAMMASAGVKKGGRIYYEEFV 327
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: A0A0D1YVM1_9PEZI (Uncharacterized protein n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D1YVM1_9PEZI) HSP 1 Score: 63.2 bits (152), Expect = 5.010e-10 Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTY------KVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDREL 294
FD + DG +T EL ++ SLGQ+P E+ + E D++++GA+DF+EF R++ +LT ++ A + D+ G + + LK L++ G L+ E+
Sbjct: 20 FDKNGDGQITAEELGEIMRSLGQNPTATELQDIIAELDIDNSGAVDFDEFIRMMGQKLTSGGAEDDELLQAFKVFDKDGSGTISAQELKELMISIGESLSKDEI 123
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: W2S1I9_9EURO (Uncharacterized protein n=1 Tax=Cyphellophora europaea CBS 101466 TaxID=1220924 RepID=W2S1I9_9EURO) HSP 1 Score: 62.0 bits (149), Expect = 6.420e-10 Identity = 32/108 (29.63%), Postives = 57/108 (52.78%), Query Frame = 1
Query: 58 SLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRL-----TYKVRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYM 366
SLGQ P + E+ + E DV+ +GA+DF+EF ++++ + ++ RAA D+ N G + L++++ G LTDRE+ E+ D +EF+ +
Sbjct: 3 SLGQKPTDSELQDMISEVDVDQSGAIDFDEFLKMMSTSVKQSDFAHETRAAFAVFDKDNSGTISADELRQVMKSLGEDLTDREIDEMIAEADXXXXXXXXYEEFVQLL 110
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: M5GDT3_DACPD (EF-hand n=3 Tax=Dacrymycetaceae TaxID=5254 RepID=M5GDT3_DACPD) HSP 1 Score: 61.6 bits (148), Expect = 2.360e-9 Identity = 38/127 (29.92%), Postives = 63/127 (49.61%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTYK-----VRAAIRAIDRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEFIDYM 366
FD D+DG V EL +LG + E+ + R+ D + +GA+ +E+F R++T R+ + +R A + D G + ++ L+R+ G L D EL + D G +N QEF+ M
Sbjct: 30 FDTDKDGAVDYHELKVAMRALGFDMKKAEVLKILRDNDSDASGAMRYEDFVRVMTERILARDPLDEIRRAFKLFDDDGTGKISLRNLRRVAKELGENLDDDELQAMIEEFDLDQDGEINEQEFLAIM 156
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Match: UPI001E1DC81B (calmodulin-beta-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC81B) HSP 1 Score: 62.4 bits (150), Expect = 4.120e-9 Identity = 35/122 (28.69%), Postives = 61/122 (50.00%), Query Frame = 1
Query: 1 FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFRRLLTNRLTYKVRAAIRAI----DRKNDGNLDIKGLKRLLVVTGSGLTDRELGEIFGAVDKGGSGRVNLQEF 354
FD ++DG +TK EL V +LGQ P E+ A+ D++ +G +DF+EF ++ + +L+ + + D DG + L +L G +T E ++ D G+V+ +EF
Sbjct: 121 FDKNQDGMITKEELGAVLHALGQRPTVSEVQALIHSVDLDKSGTIDFDEFVKIFSTKLSIDPEKELHEVFCIFDENGDGFISSDELYSMLHKLGEHITKHEAQKMINEADLNRDGKVDYREF 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9888.17233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9888.17233.1 >prot_H-elongata_contig9888.17233.1 ID=prot_H-elongata_contig9888.17233.1|Name=mRNA_H-elongata_contig9888.17233.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=126bp FDVDRDGFVTKCELCQVFWSLGQHPGEEEIDAVFREYDVNHNGALDFEEFback to top mRNA from alignment at H-elongata_contig9888:2203..3124- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9888.17233.1 ID=mRNA_H-elongata_contig9888.17233.1|Name=mRNA_H-elongata_contig9888.17233.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=922bp|location=Sequence derived from alignment at H-elongata_contig9888:2203..3124- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9888:2203..3124- >mRNA_H-elongata_contig9888.17233.1 ID=mRNA_H-elongata_contig9888.17233.1|Name=mRNA_H-elongata_contig9888.17233.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=756bp|location=Sequence derived from alignment at H-elongata_contig9888:2203..3124- (Himanthalia elongata Himel1 dioecious)back to top |