prot_H-elongata_contig122505.1719.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122505.1719.1
Unique Nameprot_H-elongata_contig122505.1719.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length136
Homology
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: D7FJJ0_ECTSI (D-3-phosphoglycerate dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJJ0_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 9.350e-73
Identity = 122/135 (90.37%), Postives = 130/135 (96.30%), Query Frame = 0
Query:    1 MALSKLGLASRRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            M+LSKLGLA RRAFHAA  PRAARILCLDNIDPVCVDIFQERGHHADVK+KLS EQL+GI+GNYDGMVIRSATKATP+LL+KATNMKVIGRAGVGIDNIDVAEATR+G+LVMNTPGGNTVSTAQLAISLL SAAR
Sbjct:   62 MSLSKLGLAGRRAFHAAA-PRAARILCLDNIDPVCVDIFQERGHHADVKNKLSVEQLHGIIGNYDGMVIRSATKATPDLLAKATNMKVIGRAGVGIDNIDVAEATRKGVLVMNTPGGNTVSTAQLAISLLCSAAR 195          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A835Z0M8_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M8_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.230e-49
Identity = 86/125 (68.80%), Postives = 105/125 (84.00%), Query Frame = 0
Query:   11 RRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            RRA HA+    A R+LCLDNIDPVCV+IF+ERGH ADVK+ L+  +L  I+G+YDGMVIRSATK T E+L  A+N+KV+GRAGVGIDNIDV E T+ G++VMNTPGGNTVSTAQLA++LL +AAR
Sbjct:   21 RRAIHASSAA-AGRVLCLDNIDPVCVEIFKERGHQADVKNGLTVPELCSIIGDYDGMVIRSATKVTGEVLKHASNLKVVGRAGVGIDNIDVPECTKAGVMVMNTPGGNTVSTAQLAVTLLCAAAR 144          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A7S4DB34_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB34_HETAK)

HSP 1 Score: 167 bits (424), Expect = 7.440e-49
Identity = 82/125 (65.60%), Postives = 100/125 (80.00%), Query Frame = 0
Query:   11 RRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            RR F +A  P+ ARILC DNIDPVCVDIF+E GH  D KSK++ E+L  I+  Y+G+V+RS TK T  +LSKATN+KV+GRAGVG+DNID+  AT+ G+LVMNTPGGNTVSTAQLA SL+ S AR
Sbjct:   42 RRNFQSAS-PQLARILCCDNIDPVCVDIFEENGHEVDYKSKVTDEELCEIIPKYEGLVVRSGTKVTENVLSKATNLKVVGRAGVGVDNIDIPAATKHGVLVMNTPGGNTVSTAQLAFSLMCSMAR 165          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A7S2RFC5_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFC5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 6.740e-45
Identity = 79/115 (68.70%), Postives = 95/115 (82.61%), Query Frame = 0
Query:   21 RAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            R+A +LC D+IDPVCVDIF+ERGH  D K  L P  L  I+  YDG+V+RSATK T +++S A+N+KV+GRAGVG+DNIDV EAT+ G+LVMNTPGGNTVSTAQLAISLL SAAR
Sbjct:   31 RSAMVLCSDSIDPVCVDIFRERGHDVDYKVGLQPSDLKEIIHKYDGLVVRSATKVTADVISAASNLKVVGRAGVGVDNIDVPEATKHGVLVMNTPGGNTVSTAQLAISLLCSAAR 145          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A6U4F3N0_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F3N0_9STRA)

HSP 1 Score: 162 bits (411), Expect = 8.340e-45
Identity = 84/135 (62.22%), Postives = 105/135 (77.78%), Query Frame = 0
Query:    5 KLGLASRRAFHAAG--GPRA--ARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            KL   + RA  A G    RA  A+ILC D IDPVC++IF+++GH  D  + L  ++L GI+G+YDG+V+RSATK TP+++  ATN+KVIGRAGVGIDNID   ATRRGI+VMNTPGGNTVSTAQLA+SL+ SAAR
Sbjct:    6 KLARQAPRALRARGLHSTRATLAKILCSDPIDPVCIEIFEKQGHQVDSITGLGEDELCGIIGDYDGLVVRSATKVTPKVMDAATNLKVIGRAGVGIDNIDTPHATRRGIMVMNTPGGNTVSTAQLAVSLICSAAR 140          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A7R9U7T3_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7T3_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.220e-43
Identity = 80/128 (62.50%), Postives = 100/128 (78.12%), Query Frame = 0
Query:    8 LASRRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            L SRR+FH++     A+ILC D IDPVCV+IF++ GH  D  + LS ++L  I+  YDG+V+RSATK T +++  ATN+KVIGRAGVGIDNID   ATRRGI+VMNTPGGNTVSTAQLA+SL+ S AR
Sbjct:   14 LVSRRSFHSSRAT-LAKILCSDQIDPVCVEIFEKNGHEVDSITGLSEDELCQIIHAYDGLVVRSATKVTAKVMDAATNLKVIGRAGVGIDNIDTPHATRRGIMVMNTPGGNTVSTAQLAVSLICSVAR 140          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A350PKP5_9BACT (Phosphoglycerate dehydrogenase (Fragment) n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A350PKP5_9BACT)

HSP 1 Score: 147 bits (370), Expect = 4.900e-41
Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 0
Query:   24 RILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            ++L LD +DPVC +IF+ERG  AD   KLSPE+L   + NYDGMV+RSAT  TPELL KATNMKVIGRAGVG+DNID+  AT +GILVMNTP GNT+STA+    ++ + AR
Sbjct:    4 KVLLLDGVDPVCANIFKERGIQADQPIKLSPEELNSQISNYDGMVVRSATTVTPELLEKATNMKVIGRAGVGVDNIDIKAATTKGILVMNTPDGNTISTAEHTCGMIIALAR 115          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A3F3I2Q4_9BACT (D-3-phosphoglycerate dehydrogenase n=5 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A3F3I2Q4_9BACT)

HSP 1 Score: 147 bits (372), Expect = 2.250e-39
Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = 0
Query:   24 RILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            ++L LD +DPVC +IF+ERG  AD   KLSPE+L   + NYDGMV+RSAT  TPELL KATNMKVIGRAGVG+DNID+  AT +GILVMNTP GNT+STA+    ++ + AR
Sbjct:    4 KVLLLDGVDPVCANIFKERGIQADQPGKLSPEELNSQISNYDGMVVRSATTVTPELLEKATNMKVIGRAGVGVDNIDIKAATTKGILVMNTPDGNTISTAEHTCGMIIALAR 115          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A7S3HLF2_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLF2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.190e-39
Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = 0
Query:    5 KLGLASRRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            ++   +RR++  +    A RIL  D +D VC++IF++RGH  D K  +   +L  IVG YD +V+RSATK TP ++  A  M++IGRAGVGIDNIDV EAT+ G++VMNTPGGNTVSTAQLA+SLL S AR
Sbjct:   12 RVAFLARRSYQTSSAANA-RILATDGVDEVCINIFKQRGHDVDFKKTMPESELVKIVGEYDALVVRSATKVTPTIIQAAKKMRIIGRAGVGIDNIDVKEATKHGMMVMNTPGGNTVSTAQLAMSLLCSLAR 141          
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Match: A0A4D9D253_9STRA (D-3-phosphoglycerate dehydrogenase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D253_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.490e-38
Identity = 70/119 (58.82%), Postives = 92/119 (77.31%), Query Frame = 0
Query:   17 AGGPRAARILCLDNIDPVCVDIFQERGHHADVKSKLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNIDVAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR 135
            A  P  A+ILC D+IDPVC+ IF++RGH  D K  LS E+L  I+  Y G+V+RSATK T ++++ A  + VIGRAGVG+DNID+  AT++G++VMNTPGGNTVSTAQLA SLL+ +AR
Sbjct:   32 ASRPALAKILCADSIDPVCIQIFKDRGHEVDYKVGLSKEELLTIIPEYHGLVVRSATKVTGDVIAAAEKLVVIGRAGVGVDNIDLRAATKKGVMVMNTPGGNTVSTAQLAFSLLAVSAR 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122505.1719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJJ0_ECTSI9.350e-7390.37D-3-phosphoglycerate dehydrogenase n=1 Tax=Ectocar... [more]
A0A835Z0M8_9STRA4.230e-4968.80D-3-phosphoglycerate dehydrogenase n=1 Tax=Tribone... [more]
A0A7S4DB34_HETAK7.440e-4965.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2RFC5_9STRA6.740e-4568.70D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhizoch... [more]
A0A6U4F3N0_9STRA8.340e-4562.22D-3-phosphoglycerate dehydrogenase n=1 Tax=Phaeomo... [more]
A0A7R9U7T3_9STRA3.220e-4362.50D-3-phosphoglycerate dehydrogenase n=1 Tax=Pinguio... [more]
A0A350PKP5_9BACT4.900e-4163.39Phosphoglycerate dehydrogenase (Fragment) n=1 Tax=... [more]
A0A3F3I2Q4_9BACT2.250e-3963.39D-3-phosphoglycerate dehydrogenase n=5 Tax=Bactero... [more]
A0A7S3HLF2_9STRA5.190e-3954.96D-3-phosphoglycerate dehydrogenase n=1 Tax=Spumell... [more]
A0A4D9D253_9STRA1.490e-3858.82D-3-phosphoglycerate dehydrogenase n=1 Tax=Nannoch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 114..135
e-value: 7.4E-35
score: 122.0
NoneNo IPR availableGENE3D3.40.50.720coord: 25..113
e-value: 7.4E-35
score: 122.0
NoneNo IPR availablePANTHERPTHR42938FAMILY NOT NAMEDcoord: 23..135
NoneNo IPR availablePANTHERPTHR42938:SF5D-3-PHOSPHOGLYCERATE DEHYDROGENASEcoord: 23..135
NoneNo IPR availableSUPERFAMILY52283Formate/glycerate dehydrogenase catalytic domain-likecoord: 23..131
IPR006139D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domainPFAMPF003892-Hacid_dhcoord: 25..126
e-value: 1.3E-27
score: 96.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122505contigH-elongata_contig122505:548..1820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122505.1719.1mRNA_H-elongata_contig122505.1719.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122505 548..1820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122505.1719.1 ID=prot_H-elongata_contig122505.1719.1|Name=mRNA_H-elongata_contig122505.1719.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp
MALSKLGLASRRAFHAAGGPRAARILCLDNIDPVCVDIFQERGHHADVKS
KLSPEQLYGIVGNYDGMVIRSATKATPELLSKATNMKVIGRAGVGIDNID
VAEATRRGILVMNTPGGNTVSTAQLAISLLSSAAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006139D-isomer_2_OHA_DH_cat_dom