prot_H-elongata_contig122475.1718.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122475.1718.1
Unique Nameprot_H-elongata_contig122475.1718.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length50
Homology
[Close]
BLAST of mRNA_H-elongata_contig122475.1718.1 vs. uniprot
Match: A0A2S7QSM9_9HELO (Tuftelin interacting 11 protein n=3 Tax=unclassified Rutstroemia TaxID=2684950 RepID=A0A2S7QSM9_9HELO)

HSP 1 Score: 50.4 bits (119), Expect = 7.490e-6
Identity = 27/49 (55.10%), Postives = 32/49 (65.31%), Query Frame = 0 
Query:    1 PDQFENASNSRRAGRFGPDQGGAGATDESGMNFAKRMMAKMDYKEGQGV 49
            P  F   SN R     G  +GG+GAT  +GM+FA RMMAKM YKEGQG+
Sbjct:  110 PSAFSTPSNGR-----GGKKGGSGATPVNGMSFAARMMAKMGYKEGQGL 153
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122475.1718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2S7QSM9_9HELO7.490e-655.10Tuftelin interacting 11 protein n=3 Tax=unclassifi... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122475contigH-elongata_contig122475:1665..1814 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122475.1718.1mRNA_H-elongata_contig122475.1718.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122475 1665..1814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122475.1718.1 ID=prot_H-elongata_contig122475.1718.1|Name=mRNA_H-elongata_contig122475.1718.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=50bp
PDQFENASNSRRAGRFGPDQGGAGATDESGMNFAKRMMAKMDYKEGQGV*
back to top