prot_H-elongata_contig122430.1714.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig122430.1714.1
Unique Nameprot_H-elongata_contig122430.1714.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length322
Homology
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.470e-45
Identity = 122/343 (35.57%), Postives = 177/343 (51.60%), Query Frame = 0
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTYITRAA----RLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQ------NASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREK--------GQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            DVIGLQETR +G  +    GY++  S    G   +K+G  G G+AI+  +  +     R  E I  RL+K+ L++ GR   VTF V YAP+E        + + K +FWT+LD A+ EV   + L VLMDANARTGRR          G   R  RGW   +  + E+                 ++ +     ++      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + ++  +   +Q I+ E G +L D   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   13 DVIGLQETRRAGQGSIAHDGYVIIWSGARAGTK-DKRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPSETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDWCCDAKIMGACARGQRGWY-TSEAQQEISXXXXXXXXXXXXXXGASKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVKGKRSFTSQNIKYEDGKVLWDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVRGMANRKAVGPDDLPAELIKLFL 352          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5J5Z5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5Z5_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 4.480e-32
Identity = 111/324 (34.26%), Postives = 158/324 (48.77%), Query Frame = 0
Query:   55 RLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQ------NASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRG-WCRDART---EAELQAATD----------------VMHAAWQGLK--------------------------MDTRGAQ----LRKAVRKACNGLKKV-RSAAVVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            R  E I  RL+K+ L++ GR   VTF V YAPT+        + + K +FWT++D A+ EV   + L VLMDANARTGRR  G       G + RD+     E  L  A+D                V H      K                          +D + +     L  A+ KA    + + R  A+ +FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   10 RTVECISLRLMKVRLQI-GRTCGVTFVVGYAPTDTVRTTAGGDVNAKDSFWTAVDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDSMNNNGERLLGPASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKKYHLDFILMRQTNRRFVRNVSVKLVDFKDSDHNLVLTTAMLKAARKKRSIARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAELIKLFL 332          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KRJ3_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRJ3_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 4.710e-25
Identity = 104/330 (31.52%), Postives = 151/330 (45.76%), Query Frame = 0
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTY----ITRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQ-HPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            DVIGLQETR +G  A T  GY++  S    G   +K+G  G G+AI+      +    R  E I  RL+K      GR +        +P  +                                 A   R  +GQ     RGW   +  + E+  A+  + AA Q L+  ++       ++      +K RS A  R    FFE +V  LEK+ R GDQ GF +++K + +E  +   +Q I+DE G + RD   IR+RW R+F  L N KS  +D     ++ + H  V   GI P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  127 DVIGLQETRRAGQGAITHDGYVIIWSGARAGTK-DKRGVHGVGIAIKETMWDSVGEGGRTVECISPRLMKAA---NGRDRRRADATVMSPASE--------------------------------TAPLARCARGQ-----RGWY-TSEAQHEISEASTEIKAAHQQLRGASKNNAFEATLKAMLKAARKNRSIARWRALETFFEGYVRQLEKKSREGDQAGFNRHLKMIDVEGKRSFTSQNIKDEDGKVFRDPTFIRQRWARWFHKLPNTKSPTIDLHATDKVKRCHTCVPLEGI-PSLLEVEEAVREMANRKAVGPDDLPAELIKLFL 413          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5JGC2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC2_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 9.240e-24
Identity = 81/236 (34.32%), Postives = 123/236 (52.12%), Query Frame = 0
Query:   90 QNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            QN ++     T+L R   E +  E    +M A A T      +  R  RGW   +  + E+  A+  + AA Q L+  ++ +     ++      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:   87 QNRASSRPPPTALRRPTGETAA-ELTATVMSAAAETA--PLARCARGQRGWY-TSEAQHEISEASKEIKAAQQQLRGVSKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKRRAGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDNLPAELIKLFL 318          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.080e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0
Query:  137 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  191 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 379          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.210e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0
Query:  137 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  329 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 517          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.290e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0
Query:  137 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  441 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 629          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.360e-23
Identity = 68/189 (35.98%), Postives = 107/189 (56.61%), Query Frame = 0
Query:  137 GRGWCRDARTEAELQAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAA----VVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            G+G    +  + E+  A+  +  A Q L+  ++ + L   ++      +K RS+A    + +FFE +V  LEK+ R GDQ GF++++K + +E  + + +Q I+DE G +LRD    R+RW R+F  LLN KS  +D     R+ Q P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:  562 GKGGWYTSEAQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFL 750          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5KTM0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM0_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 1.820e-22
Identity = 92/282 (32.62%), Postives = 136/282 (48.23%), Query Frame = 0
Query:    1 DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIR----TYITRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEK------QNASNKHAFWTSLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAELQAATDVMHAAWQ---GLKMDTRGAQLRKAVRKACNGLKKVRSAAVVRFFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLD 269
            DVIGLQ TR  G  +    GY++  S          +G  G G+A++      +    R  E I  RL+K+ L++ GR   VT  V YAPTE        + + K +FWT+LD A+ EV   + L VLMDANARTGRR  G         C DA+         D+M+   +   GL  D + +      R    G++    ++  +  E++ +D    +R  D+  F  ++K + +E  +   +Q I DE G +LRD    R+RW R+F  LLN KS  +D
Sbjct:   27 DVIGLQGTRREGQGSIAHDGYVIIWSGA--------QGVHGVGIAMKGAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTLVVGYAPTETIRTIAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDG---------CCDAKIMGAY--GRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSN-KGKEKYRLDFIL-MRQTDRR-FRAHLKMIDVEGKRSFTSQNINDEDGEVLRDPTFTRQRWARWFHKLLNTKSPTID 285          
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.760e-22
Identity = 65/167 (38.92%), Postives = 95/167 (56.89%), Query Frame = 0
Query:  159 AAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVR----FFERHVVDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIRERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKAMSNAKAVGPDGLPVELLKLGL 321
            AA Q L+  ++ +     +R      +K RS A  R    FFE +V  LEK+ R GDQ GF++++K + +E  +   +Q I+DE G +LRD   IR+RW R+F  LLN KS  +D     ++ + P    L   P+  E+  A++ M+N KAVGPD LP EL+KL L
Sbjct:    2 AAQQQLRGASKNSAFEAILRAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIKLFL 168          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig122430.1714.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAA3_9PHAE2.470e-4535.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5J5Z5_9PHAE4.480e-3234.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRJ3_9PHAE4.710e-2531.52Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JGC2_9PHAE9.240e-2434.32Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K8Z5_9PHAE3.080e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KC90_9PHAE3.210e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE3.290e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDI8_9PHAE3.360e-2335.98Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KTM0_9PHAE1.820e-2232.62Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L012_9PHAE2.760e-2238.92Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig122430contigH-elongata_contig122430:8..1504 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig122430.1714.1mRNA_H-elongata_contig122430.1714.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig122430 8..1504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig122430.1714.1 ID=prot_H-elongata_contig122430.1714.1|Name=mRNA_H-elongata_contig122430.1714.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=322bp
DVIGLQETRHSGHSAFTQAGYLVYCSSECGGKNGEKKGQGGAGLAIRTYI
TRAARLSEFIGDRLLKITLELRGRAKAVTFFVAYAPTEKQNASNKHAFWT
SLDRAVEEVSRHEKLFVLMDANARTGRREKGQVRRPGRGWCRDARTEAEL
QAATDVMHAAWQGLKMDTRGAQLRKAVRKACNGLKKVRSAAVVRFFERHV
VDLEKQLRVGDQHGFFQNIKSVQLEETKKVKAQCIRDEGGILLRDEGRIR
ERWVRFFRALLNLKSDMLDPDIQKRLPQHPVVSSLGIEPTEEEIATAMKA
MSNAKAVGPDGLPVELLKLGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf