prot_H-elongata_contig97821.17124.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig97821.17124.1
Unique Nameprot_H-elongata_contig97821.17124.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length107
Homology
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JV14_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV14_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 6.500e-25
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H +TI LTAF T +GL++WL MPQ ++  P  F  V+  V   L  +  YLDD I  DD+P  HV T+
Sbjct:   77 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRETIHLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNLRGVASYLDDLIVFDDTPATHVGTI 178          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5L5J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J9_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 4.310e-24
Identity = 51/102 (50.00%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    4 IPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATLAFF 105
            +PRVD++LD L  G VFS+FDL S F Q+    DT+ LTAFCTP  L++WL MPQ     P+ FV V+  V  GLE +  YLDD I  D+ P+ HV  L  F
Sbjct:   59 LPRVDDILDFLYTGKVFSIFDLNSAFHQIESDEDTVPLTAFCTPTQLFEWLRMPQGANASPSWFVKVINRVVHGLERVLAYLDDVICFDEEPLGHVLNLIEF 160          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 6.340e-24
Identity = 49/102 (48.04%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H DTI LTAF T +GL++WL MPQ ++  P  F  V+  V   L  +  YLDD I  DD+P  HV T+
Sbjct:  339 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDNPASHVDTM 440          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JR23_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR23_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 3.210e-23
Identity = 49/102 (48.04%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G   S+FD+ S F Q+T+H DTI LTAF T +GL++WL MPQ  +  P  F  V+  V   L  +  YLDD I  DD+P  HV T+
Sbjct:   93 QLPIPRVDDTLDKLLKGQFHSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLEMPQGRSAAPGWFCKVVNEVIENLRGVASYLDDLIVFDDTPATHVGTM 194          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 4.530e-23
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H DTI LT F T +GL++WL MPQ ++  P  F  V+  V      +  YLDD I  DD+P  HV T+
Sbjct:   45 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTPFVTSSGLFEWLKMPQGSSAAPGWFCKVVNEVIKNFHGVASYLDDLIVFDDTPATHVGTM 146          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JB88_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB88_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 4.870e-23
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ I RVDE LD L  G+++S+FD+ S F Q+T+H DTI LTAF T +GL++WL MPQ +A  P  F  V+  V   L  +  YL D I  D +P  HVAT+
Sbjct:   77 QLPILRVDETLDKLLKGNIYSLFDIKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWFFKVVNEVIKNLRGVASYLADLIVFDATPAAHVATI 178          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JFL9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL9_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.450e-23
Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H DTI LTAF T + L++WL MPQ ++  P  F  V+  V   L  +  YLDD I  DD+P  HV T+
Sbjct:  234 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGWFCKVVNEVIKNLHGVASYLDDLIVFDDTPATHVGTM 335          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5JUV3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV3_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.090e-22
Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H DTI LTAF T + L++WL MPQ ++  P RF  V+  V   L ++  YLDD I  DD+   HV T+
Sbjct:  121 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSELFEWLKMPQGSSAAPGRFCKVVNEVIKNLHDVASYLDDLIVFDDTLPTHVGTM 222          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5K4V4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4V4_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 1.350e-22
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATL 102
            Q+ IPRVD+ LD L  G ++S+FD+ S F Q+T+H DTI LTAF T +GL++WL MPQ ++     F  V+  V     ++  Y+DD I  DD+P  HV T+
Sbjct:   96 QLPIPRVDDTLDKLLKGRIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSSAAFGWFCKVVNEVIKNFRDVASYVDDLIVFDDTPATHVGTM 197          
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Match: A0A6H5K248_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K248_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.360e-22
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 0
Query:    1 QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGLYKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVATLAFFC 106
            Q+ IPRVD+ L  L  G ++S+FD+ S F Q+T+H DTI LTAF T +GL++WL MPQ +A  P  F  V+  V   L  +  YLDD I  D++P  HVA     C
Sbjct:  240 QLPIPRVDDTLAKLLKGKIYSLFDMKSSFHQITVHRDTIPLTAFVTSSGLFEWLKMPQGSAAAPGWFCKVVNEVIRNLRGVASYLDDLIVFDETPAAHVAXSGQCC 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig97821.17124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV14_9PHAE6.500e-2547.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L5J9_9PHAE4.310e-2450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUZ4_9PHAE6.340e-2448.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR23_9PHAE3.210e-2348.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFG8_9PHAE4.530e-2346.08Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JB88_9PHAE4.870e-2348.04Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JFL9_9PHAE5.450e-2347.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JUV3_9PHAE1.090e-2247.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4V4_9PHAE1.350e-2245.10Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K248_9PHAE1.360e-2246.23Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 2..102
e-value: 6.5E-21
score: 76.7
NoneNo IPR availableGENE3D3.10.10.10coord: 30..62
e-value: 6.5E-21
score: 76.7
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig97821contigH-elongata_contig97821:2119..2439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig97821.17124.1mRNA_H-elongata_contig97821.17124.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig97821 2119..2439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig97821.17124.1 ID=prot_H-elongata_contig97821.17124.1|Name=mRNA_H-elongata_contig97821.17124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=107bp
QIAIPRVDEVLDTLGGGSVFSVFDLFSGFTQLTIHPDTISLTAFCTPNGL
YKWLCMPQDTAGVPARFVSVMCLVTSGLENIRIYLDDAIDSDDSPIKHVA
TLAFFC*
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